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The map label for this gene is soj [H]

Identifier: 148643301

GI number: 148643301

Start: 1244937

End: 1245713

Strand: Reverse

Name: soj [H]

Synonym: Msm_1241

Alternate gene names: 148643301

Gene position: 1245713-1244937 (Counterclockwise)

Preceding gene: 148643302

Following gene: 148643300

Centisome position: 67.22

GC content: 31.92

Gene sequence:

>777_bases
ATGAGTGAAATAATAGCTGTAATGAATCAAAAAGGAGGCTGTGGAAAGACTACAACTGTAGTTAATACAGCAACTTCACT
AGCTGTAATGGGTAAAAGTGTTTTGGTAATTGATATGGATCCTCAGGGTAATGCAACTACTAGCTTCGGTATTGATAAAA
CAAAATTAGAAAATACTATTTATGATGCAATTATTGGGGATGTAAGTGTTAAAAAAGTAACAATCCCTACATTTATCAAG
AATTTATTCATTGTCCCAAGTAATATTTCATTAAGTGGAGCAGGGGTTGAATTAAGTAAAAAGGAAAATTATCACATTGT
TTTAAAGGAAACACTTAAGGATTTACCTCCTTTATTTGACTATATCTTTATTGATTTACCTCCTTCTTTAGGTGTTATAA
CTGTTAATGCATTAGTTGCAGCTGACAGTGTTCTTATACCTATCCAAGCAGAGTATTATGCATTGGAAGGTGTGGCTGAT
TTGATTAATACTATTAACTTAGTTAAAAAGAGGCTTAGAACACCTGTTCCAATCAAAGGTATTCTTCTGACATTATATGA
TAAAAGAACAAGGCTCAGTAAGGATGTCTACAAGGAACTTAAAAATCATTTTGGAAGCACTAATCTGTTATTTAATACTG
TGATTCCAAGAAATATCAGGTTAGCTGAAGCTCCAAGTTATGGTAAACCTTGTTTAATTTATGATTCTGAAAGTACAGGT
ACAAAAGCTTATCTAAGTTTAGCTAAAGAAATTATAGAACGTGATGGAGGTAATTAG

Upstream 100 bases:

>100_bases
TTTCTTTTAAGTTATAACTTAGAAGTTATCTCTTGTAAGATATAACTTAAAACTTATTTCTAATAACTTAGAACTTATCA
TTTATAAGGAGAATTAATTA

Downstream 100 bases:

>100_bases
ATGGCTAAAAAATCAACAGGTTTAGGTAAAGGATTAGATTCTTTAATTCCTGATTTTTATGATGAGGATTTTGACAGTAA
TTCTGCAGTATCTTTAGAAG

Product: chromosome partitioning ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSEIIAVMNQKGGCGKTTTVVNTATSLAVMGKSVLVIDMDPQGNATTSFGIDKTKLENTIYDAIIGDVSVKKVTIPTFIK
NLFIVPSNISLSGAGVELSKKENYHIVLKETLKDLPPLFDYIFIDLPPSLGVITVNALVAADSVLIPIQAEYYALEGVAD
LINTINLVKKRLRTPVPIKGILLTLYDKRTRLSKDVYKELKNHFGSTNLLFNTVIPRNIRLAEAPSYGKPCLIYDSESTG
TKAYLSLAKEIIERDGGN

Sequences:

>Translated_258_residues
MSEIIAVMNQKGGCGKTTTVVNTATSLAVMGKSVLVIDMDPQGNATTSFGIDKTKLENTIYDAIIGDVSVKKVTIPTFIK
NLFIVPSNISLSGAGVELSKKENYHIVLKETLKDLPPLFDYIFIDLPPSLGVITVNALVAADSVLIPIQAEYYALEGVAD
LINTINLVKKRLRTPVPIKGILLTLYDKRTRLSKDVYKELKNHFGSTNLLFNTVIPRNIRLAEAPSYGKPCLIYDSESTG
TKAYLSLAKEIIERDGGN
>Mature_257_residues
SEIIAVMNQKGGCGKTTTVVNTATSLAVMGKSVLVIDMDPQGNATTSFGIDKTKLENTIYDAIIGDVSVKKVTIPTFIKN
LFIVPSNISLSGAGVELSKKENYHIVLKETLKDLPPLFDYIFIDLPPSLGVITVNALVAADSVLIPIQAEYYALEGVADL
INTINLVKKRLRTPVPIKGILLTLYDKRTRLSKDVYKELKNHFGSTNLLFNTVIPRNIRLAEAPSYGKPCLIYDSESTGT
KAYLSLAKEIIERDGGN

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28134; Mature: 28003

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIIAVMNQKGGCGKTTTVVNTATSLAVMGKSVLVIDMDPQGNATTSFGIDKTKLENTI
CCCHHEECCCCCCCCCCCEEEHHHHHHHEECCEEEEEEECCCCCCCEECCCCHHHHHHHH
YDAIIGDVSVKKVTIPTFIKNLFIVPSNISLSGAGVELSKKENYHIVLKETLKDLPPLFD
HHHHHCCCEEEEEEHHHHHHHHEEECCCCEECCCCEEEECCCCEEEEEHHHHHCCCHHHH
YIFIDLPPSLGVITVNALVAADSVLIPIQAEYYALEGVADLINTINLVKKRLRTPVPIKG
EEEEECCCCCCEEEEEHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILLTLYDKRTRLSKDVYKELKNHFGSTNLLFNTVIPRNIRLAEAPSYGKPCLIYDSESTG
EEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCEEEECCCCCC
TKAYLSLAKEIIERDGGN
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEIIAVMNQKGGCGKTTTVVNTATSLAVMGKSVLVIDMDPQGNATTSFGIDKTKLENTI
CCHHEECCCCCCCCCCCEEEHHHHHHHEECCEEEEEEECCCCCCCEECCCCHHHHHHHH
YDAIIGDVSVKKVTIPTFIKNLFIVPSNISLSGAGVELSKKENYHIVLKETLKDLPPLFD
HHHHHCCCEEEEEEHHHHHHHHEEECCCCEECCCCEEEECCCCEEEEEHHHHHCCCHHHH
YIFIDLPPSLGVITVNALVAADSVLIPIQAEYYALEGVADLINTINLVKKRLRTPVPIKG
EEEEECCCCCCEEEEEHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILLTLYDKRTRLSKDVYKELKNHFGSTNLLFNTVIPRNIRLAEAPSYGKPCLIYDSESTG
EEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCEEEECCCCCC
TKAYLSLAKEIIERDGGN
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]