| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is fae-hps [H]
Identifier: 148643273
GI number: 148643273
Start: 1212825
End: 1214051
Strand: Reverse
Name: fae-hps [H]
Synonym: Msm_1213
Alternate gene names: 148643273
Gene position: 1214051-1212825 (Counterclockwise)
Preceding gene: 148643274
Following gene: 148643272
Centisome position: 65.51
GC content: 36.02
Gene sequence:
>1227_bases ATGTACAATATAGGAGAAGCTCTTATTGGTGATGGAAACGAGTTAGCTCATATTGATTTAATAATCGGTGAAAAAGAAGG ACCTGTAGGTCAAGCTTTTGCAAACGGATTATCAAATTTATCTGTGGGCCACACTCCATTAACCACTGTAATTAGACCAA ATTTAATGACTAAACCAGCAACTTTAATCATTCCTAAAGTTACTGTTGGAGATTTAGACGATGCTGCTAAAGTATTTGGA CCTGCACAAACTGCTGTTGGTAGGGCAGTAGCTGATGCAGTAGAAGAAGGATACATTCCAAAAGACATCGTTGAGGACAT CGTAATTAATGTAAGTGTATTTATTGACCCTGCTGCAAAAAATTATAGGAAAATATATCAATACAACTATGGAGCAACTA AATTAGCTATTAGAAGGGCTATGGAAGGTTACCCATCTATTGACAAAGTACTTGCAGAAAAAGATCGTGGAACTCACCCA ATTATGGGCTTCAGAGTACAAAAACTTTGGTCCCCACCATATTTACAAGTTGCACTTGATTTAGACAACTTAGACGCTAT GGAAAGAATCATCAACGATTTGCCTGATAAAGAAAGAGTTCTTATTGAAGCGGGAACTCCACTTGTTAAAAAATTCGGTG TCGGTGTTGTTGGAAAAATTAGGGAATTACGTCCAAGTGCATTCATTATAGCTGACCTAAAAACTTTAGATGTTGGTAGA GTAGAAATAAAAATGGCTGCAGATGAAACAGCAGATGCAGTAGCTATTTCTGGTCTTGGAACTATCGAATCTATTAAGAA AGCTATTCATGAAACTCAAAAACAAGGTATTTATTCAATCCTTGATATGATGAATGTGGCTGACTTTGAAGAAAAATTAT CTGCTCTTCCAGATGACTTAAAACCGGATATAGTTTTATTACACAGAAATGTGGATTTAGAAACTTACAAAGCTGAAAAA GGTGAAGATACCAGTGAAATGACTGAATGGGGTAATATTAAATCCATTAAAAAACTCATTGGTGACGGTTTAGTTGCAGT AGCTGGAGGAATTACTCCTAATAAAGTAGAGGAAGCTACTTCAAAAGGTGCAGATATTATTATTGCAGGTAGATACATTA TTGGTTCTAGAGATGTAAGAAGAGCTGCTGAAGACTTCTTAGCACATTTCCCACAAGATCCAGATAGTATGAGACTTGCA CTTGATGAAGACGAACAAGTAAATTAA
Upstream 100 bases:
>100_bases TTAGAGCAATATTATCAGTAACTTGTTTTTTAGTAGTTAGCTTTATTTAATTAAAAAAATATAATTATATATTGTATATA ATATACGGAGGAACTATTTA
Downstream 100 bases:
>100_bases ATCTTTTGATTTAATTTATTCTATTTTTTTTTAAAAAAGGAGATTATAATATGGGATTTTGTAATTCTTGCGGCAGGCCA ATTGTAAAAGCAGATTATGG
Product: bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase
Products: NA
Alternate protein names: Formaldehyde-activating enzyme; Fae; 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MYNIGEALIGDGNELAHIDLIIGEKEGPVGQAFANGLSNLSVGHTPLTTVIRPNLMTKPATLIIPKVTVGDLDDAAKVFG PAQTAVGRAVADAVEEGYIPKDIVEDIVINVSVFIDPAAKNYRKIYQYNYGATKLAIRRAMEGYPSIDKVLAEKDRGTHP IMGFRVQKLWSPPYLQVALDLDNLDAMERIINDLPDKERVLIEAGTPLVKKFGVGVVGKIRELRPSAFIIADLKTLDVGR VEIKMAADETADAVAISGLGTIESIKKAIHETQKQGIYSILDMMNVADFEEKLSALPDDLKPDIVLLHRNVDLETYKAEK GEDTSEMTEWGNIKSIKKLIGDGLVAVAGGITPNKVEEATSKGADIIIAGRYIIGSRDVRRAAEDFLAHFPQDPDSMRLA LDEDEQVN
Sequences:
>Translated_408_residues MYNIGEALIGDGNELAHIDLIIGEKEGPVGQAFANGLSNLSVGHTPLTTVIRPNLMTKPATLIIPKVTVGDLDDAAKVFG PAQTAVGRAVADAVEEGYIPKDIVEDIVINVSVFIDPAAKNYRKIYQYNYGATKLAIRRAMEGYPSIDKVLAEKDRGTHP IMGFRVQKLWSPPYLQVALDLDNLDAMERIINDLPDKERVLIEAGTPLVKKFGVGVVGKIRELRPSAFIIADLKTLDVGR VEIKMAADETADAVAISGLGTIESIKKAIHETQKQGIYSILDMMNVADFEEKLSALPDDLKPDIVLLHRNVDLETYKAEK GEDTSEMTEWGNIKSIKKLIGDGLVAVAGGITPNKVEEATSKGADIIIAGRYIIGSRDVRRAAEDFLAHFPQDPDSMRLA LDEDEQVN >Mature_408_residues MYNIGEALIGDGNELAHIDLIIGEKEGPVGQAFANGLSNLSVGHTPLTTVIRPNLMTKPATLIIPKVTVGDLDDAAKVFG PAQTAVGRAVADAVEEGYIPKDIVEDIVINVSVFIDPAAKNYRKIYQYNYGATKLAIRRAMEGYPSIDKVLAEKDRGTHP IMGFRVQKLWSPPYLQVALDLDNLDAMERIINDLPDKERVLIEAGTPLVKKFGVGVVGKIRELRPSAFIIADLKTLDVGR VEIKMAADETADAVAISGLGTIESIKKAIHETQKQGIYSILDMMNVADFEEKLSALPDDLKPDIVLLHRNVDLETYKAEK GEDTSEMTEWGNIKSIKKLIGDGLVAVAGGITPNKVEEATSKGADIIIAGRYIIGSRDVRRAAEDFLAHFPQDPDSMRLA LDEDEQVN
Specific function: Catalyzes the formation of ribulose-5-phosphate and formaldehyde from 3-hexulose-6-phosphate [H]
COG id: COG0269
COG function: function code G; 3-hexulose-6-phosphate synthase and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the HPS/KGPDC family. HPS subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790006, Length=221, Percent_Identity=26.6968325791855, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR020868 - InterPro: IPR014826 - InterPro: IPR001754 - InterPro: IPR020568 - InterPro: IPR000056 - InterPro: IPR011060 [H]
Pfam domain/function: PF08714 Fae; PF00215 OMPdecase [H]
EC number: =4.1.2.43 [H]
Molecular weight: Translated: 44437; Mature: 44437
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNIGEALIGDGNELAHIDLIIGEKEGPVGQAFANGLSNLSVGHTPLTTVIRPNLMTKPA CCCCCCHHCCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC TLIIPKVTVGDLDDAAKVFGPAQTAVGRAVADAVEEGYIPKDIVEDIVINVSVFIDPAAK EEEEECCEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEECCCHH NYRKIYQYNYGATKLAIRRAMEGYPSIDKVLAEKDRGTHPIMGFRVQKLWSPPYLQVALD HHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEE LDNLDAMERIINDLPDKERVLIEAGTPLVKKFGVGVVGKIRELRPSAFIIADLKTLDVGR CCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCHHHHHHHCCCCEEEEEECEEECCCE VEIKMAADETADAVAISGLGTIESIKKAIHETQKQGIYSILDMMNVADFEEKLSALPDDL EEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KPDIVLLHRNVDLETYKAEKGEDTSEMTEWGNIKSIKKLIGDGLVAVAGGITPNKVEEAT CCCEEEEEECCCCEEEECCCCCCHHHHHHCCCHHHHHHHHCCCCEEEECCCCHHHHHHHH SKGADIIIAGRYIIGSRDVRRAAEDFLAHFPQDPDSMRLALDEDEQVN CCCCCEEEECEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MYNIGEALIGDGNELAHIDLIIGEKEGPVGQAFANGLSNLSVGHTPLTTVIRPNLMTKPA CCCCCCHHCCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCC TLIIPKVTVGDLDDAAKVFGPAQTAVGRAVADAVEEGYIPKDIVEDIVINVSVFIDPAAK EEEEECCEECCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEECCCHH NYRKIYQYNYGATKLAIRRAMEGYPSIDKVLAEKDRGTHPIMGFRVQKLWSPPYLQVALD HHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEE LDNLDAMERIINDLPDKERVLIEAGTPLVKKFGVGVVGKIRELRPSAFIIADLKTLDVGR CCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCHHHHHHHCCCCEEEEEECEEECCCE VEIKMAADETADAVAISGLGTIESIKKAIHETQKQGIYSILDMMNVADFEEKLSALPDDL EEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KPDIVLLHRNVDLETYKAEKGEDTSEMTEWGNIKSIKKLIGDGLVAVAGGITPNKVEEAT CCCEEEEEECCCCEEEECCCCCCHHHHHHCCCHHHHHHHHCCCCEEEECCCCHHHHHHHH SKGADIIIAGRYIIGSRDVRRAAEDFLAHFPQDPDSMRLALDEDEQVN CCCCCEEEECEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]