| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643272
Identifier: 148643272
GI number: 148643272
Start: 1212496
End: 1212774
Strand: Reverse
Name: 148643272
Synonym: Msm_1212
Alternate gene names: NA
Gene position: 1212774-1212496 (Counterclockwise)
Preceding gene: 148643273
Following gene: 148643269
Centisome position: 65.44
GC content: 33.69
Gene sequence:
>279_bases ATGGGATTTTGTAATTCTTGCGGCAGGCCAATTGTAAAAGCAGATTATGGTACTAACGCAGATGGTAGTTTAAATGATGA ATATTGTAAAGATTGTTTTCAAAATGGGGAATTTACAGAACCTGATATAACTCTTGAAGAAATGATTACAAGAAAAACAA AGGAAATGATGGAAAAAAATCCTAGATTGCCTGAAAACCAAGCTACAGGTATTACTGTTGGATTTATACCAGGTTTAAAA AGATGGTGTCCAGAAGAGTTCTGGGATGATGAATTTTAG
Upstream 100 bases:
>100_bases ATCCAGATAGTATGAGACTTGCACTTGATGAAGACGAACAAGTAAATTAAATCTTTTGATTTAATTTATTCTATTTTTTT TTAAAAAAGGAGATTATAAT
Downstream 100 bases:
>100_bases TCTGTTTTTAAAATAAATTCTTTAATTCTATTAGCTATATATTCATCATGACTTTTATTTGATTTGAGGAAGTAATTTTC TTCTTCTAATTCATTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MGFCNSCGRPIVKADYGTNADGSLNDEYCKDCFQNGEFTEPDITLEEMITRKTKEMMEKNPRLPENQATGITVGFIPGLK RWCPEEFWDDEF
Sequences:
>Translated_92_residues MGFCNSCGRPIVKADYGTNADGSLNDEYCKDCFQNGEFTEPDITLEEMITRKTKEMMEKNPRLPENQATGITVGFIPGLK RWCPEEFWDDEF >Mature_91_residues GFCNSCGRPIVKADYGTNADGSLNDEYCKDCFQNGEFTEPDITLEEMITRKTKEMMEKNPRLPENQATGITVGFIPGLKR WCPEEFWDDEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10552; Mature: 10421
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFCNSCGRPIVKADYGTNADGSLNDEYCKDCFQNGEFTEPDITLEEMITRKTKEMMEKN CCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC PRLPENQATGITVGFIPGLKRWCPEEFWDDEF CCCCCCCCCCEEEECCCCHHHCCCHHHCCCCC >Mature Secondary Structure GFCNSCGRPIVKADYGTNADGSLNDEYCKDCFQNGEFTEPDITLEEMITRKTKEMMEKN CCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC PRLPENQATGITVGFIPGLKRWCPEEFWDDEF CCCCCCCCCCEEEECCCCHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA