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The map label for this gene is yfbE [C]

Identifier: 148643090

GI number: 148643090

Start: 991452

End: 992558

Strand: Reverse

Name: yfbE [C]

Synonym: Msm_1030

Alternate gene names: 148643090

Gene position: 992558-991452 (Counterclockwise)

Preceding gene: 148643096

Following gene: 148643088

Centisome position: 53.56

GC content: 33.97

Gene sequence:

>1107_bases
ATGGCGGATATTAAAGTTCCAATTGCAAAACCAATAATTGGAGAAGAAGAAATTAAAAATGTTGTAGAAGTTTTAAAATC
AGGTATGATTGCTCAAGGTCCTAAAGTAACTGAATTTGAAGAAAAATTTGCTGCTTGGATTGGAACAAAATATGCAATTG
CAACTAATTCTGGAACATCTGCTCTACATGTAGCTTTACTTGCAGCAGGAATAGGTAAAGGGGATGAAGTGATAACTACT
CCATTTACATTTATAGCTACTGGAAATTCAATTATTTATACGGGAGCAACTCCTGTTTTTGCAGACATTGACTTAAAAAC
ATACACTATAGATCCAGACAGTATTGAGGCATTGATTACTGATAAGACAAAAGCTATTTTACCAGTTCAATTATATGGGC
AATCTGCAGACATGGATAGAATTAATGAAATCGCTGATAAACATGGTTTAAAAGTTATTGAAGATGCGGCACAGGCTCAT
GGTGCAATGTACAAAGGTAAAAATGTGGGTGCACTTGGAGATGCGGGTTGTTTCAGTTTTTATCCTACTAAAAACATGAC
TACCAGTGAAGGCGGAATTATAACTACTGATGATGAGGAATTAGCTAAAAGAGCACGTATTTTTAGAGCTCATGGTTCCA
GTATAAAATACACTCATGATGAAATAGGTTATAATTTTAGAATGACGGATATTTCTGCAGCTATCGGTCTTGCACAATTA
AATGTAATTGACGGATTCAATGACAAAAGAATAGCTAATGCAGAATATTTAAATGAAGGTTTAAAAGATGTTGATGGGGT
AGTAACTCCTTATTCTGCTGATGATTTTAAACATGTTTACCATCAATATACTATTCTTGTTGAAAAAGGAAAAAGAGATG
ATTGGGTTGATTTCTTAACTCAAAAAGGTATTGGAACAGGGGTTCATTATCCTATTCCATTATATAATCAGCCAATTTAT
AAAAAATTAGGTATCGAAGGCAGTGCACCAGATGCAGAGCTTGCTGCAAATCATGTAATTTCTTTACCGGTACATCCTTC
ATTAACACAAGAAGATTTGGATTTAGTTATTGATGCTGTAAAACAAGCTAGTGACAGCTTTAACTAA

Upstream 100 bases:

>100_bases
TTTATCACTTTTTTAAATAATCAAGTAATATTTTAAATATTATTAGATTTAAATATTATTGTAAGTTTAAATTAATCTAT
TTTTAGGATTTGGTGATAAA

Downstream 100 bases:

>100_bases
TCTTTTTCTTTTTTTATTTTAACATTTTATTTACTGTGTCAATTTTAGCATCTAAAGTTCTGTTTTCTAAATCACGTCTG
TCATCGACTTTAATAACAGT

Product: pyridoxal phosphate-dependent enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MADIKVPIAKPIIGEEEIKNVVEVLKSGMIAQGPKVTEFEEKFAAWIGTKYAIATNSGTSALHVALLAAGIGKGDEVITT
PFTFIATGNSIIYTGATPVFADIDLKTYTIDPDSIEALITDKTKAILPVQLYGQSADMDRINEIADKHGLKVIEDAAQAH
GAMYKGKNVGALGDAGCFSFYPTKNMTTSEGGIITTDDEELAKRARIFRAHGSSIKYTHDEIGYNFRMTDISAAIGLAQL
NVIDGFNDKRIANAEYLNEGLKDVDGVVTPYSADDFKHVYHQYTILVEKGKRDDWVDFLTQKGIGTGVHYPIPLYNQPIY
KKLGIEGSAPDAELAANHVISLPVHPSLTQEDLDLVIDAVKQASDSFN

Sequences:

>Translated_368_residues
MADIKVPIAKPIIGEEEIKNVVEVLKSGMIAQGPKVTEFEEKFAAWIGTKYAIATNSGTSALHVALLAAGIGKGDEVITT
PFTFIATGNSIIYTGATPVFADIDLKTYTIDPDSIEALITDKTKAILPVQLYGQSADMDRINEIADKHGLKVIEDAAQAH
GAMYKGKNVGALGDAGCFSFYPTKNMTTSEGGIITTDDEELAKRARIFRAHGSSIKYTHDEIGYNFRMTDISAAIGLAQL
NVIDGFNDKRIANAEYLNEGLKDVDGVVTPYSADDFKHVYHQYTILVEKGKRDDWVDFLTQKGIGTGVHYPIPLYNQPIY
KKLGIEGSAPDAELAANHVISLPVHPSLTQEDLDLVIDAVKQASDSFN
>Mature_367_residues
ADIKVPIAKPIIGEEEIKNVVEVLKSGMIAQGPKVTEFEEKFAAWIGTKYAIATNSGTSALHVALLAAGIGKGDEVITTP
FTFIATGNSIIYTGATPVFADIDLKTYTIDPDSIEALITDKTKAILPVQLYGQSADMDRINEIADKHGLKVIEDAAQAHG
AMYKGKNVGALGDAGCFSFYPTKNMTTSEGGIITTDDEELAKRARIFRAHGSSIKYTHDEIGYNFRMTDISAAIGLAQLN
VIDGFNDKRIANAEYLNEGLKDVDGVVTPYSADDFKHVYHQYTILVEKGKRDDWVDFLTQKGIGTGVHYPIPLYNQPIYK
KLGIEGSAPDAELAANHVISLPVHPSLTQEDLDLVIDAVKQASDSFN

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=375, Percent_Identity=38.4, Blast_Score=251, Evalue=4e-68,
Organism=Escherichia coli, GI2367285, Length=365, Percent_Identity=32.8767123287671, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 39900; Mature: 39768

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIKVPIAKPIIGEEEIKNVVEVLKSGMIAQGPKVTEFEEKFAAWIGTKYAIATNSGTS
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCH
ALHVALLAAGIGKGDEVITTPFTFIATGNSIIYTGATPVFADIDLKTYTIDPDSIEALIT
HHHHHHHHHCCCCCCCEEECCEEEEEECCEEEEECCCCEEEECCEEEEEECCHHHEEEEE
DKTKAILPVQLYGQSADMDRINEIADKHGLKVIEDAAQAHGAMYKGKNVGALGDAGCFSF
CCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCCCCCCCEEE
YPTKNMTTSEGGIITTDDEELAKRARIFRAHGSSIKYTHDEIGYNFRMTDISAAIGLAQL
ECCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCEEEEHHHCCCEEEEEHHHHHHHHHEE
NVIDGFNDKRIANAEYLNEGLKDVDGVVTPYSADDFKHVYHQYTILVEKGKRDDWVDFLT
EEECCCCCCEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHH
QKGIGTGVHYPIPLYNQPIYKKLGIEGSAPDAELAANHVISLPVHPSLTQEDLDLVIDAV
HCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCHHHHHHHHHHH
KQASDSFN
HHHHCCCC
>Mature Secondary Structure 
ADIKVPIAKPIIGEEEIKNVVEVLKSGMIAQGPKVTEFEEKFAAWIGTKYAIATNSGTS
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCH
ALHVALLAAGIGKGDEVITTPFTFIATGNSIIYTGATPVFADIDLKTYTIDPDSIEALIT
HHHHHHHHHCCCCCCCEEECCEEEEEECCEEEEECCCCEEEECCEEEEEECCHHHEEEEE
DKTKAILPVQLYGQSADMDRINEIADKHGLKVIEDAAQAHGAMYKGKNVGALGDAGCFSF
CCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCCCCCCCCEEE
YPTKNMTTSEGGIITTDDEELAKRARIFRAHGSSIKYTHDEIGYNFRMTDISAAIGLAQL
ECCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCEEEEHHHCCCEEEEEHHHHHHHHHEE
NVIDGFNDKRIANAEYLNEGLKDVDGVVTPYSADDFKHVYHQYTILVEKGKRDDWVDFLT
EEECCCCCCEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHH
QKGIGTGVHYPIPLYNQPIYKKLGIEGSAPDAELAANHVISLPVHPSLTQEDLDLVIDAV
HCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCHHHHHHHHHHH
KQASDSFN
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]