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The map label for this gene is ydaO [C]

Identifier: 148643088

GI number: 148643088

Start: 990212

End: 991078

Strand: Reverse

Name: ydaO [C]

Synonym: Msm_1028

Alternate gene names: 148643088

Gene position: 991078-990212 (Counterclockwise)

Preceding gene: 148643090

Following gene: 148643082

Centisome position: 53.48

GC content: 30.22

Gene sequence:

>867_bases
ATGGTTCAGTTAAACAAAAAAGAATTTAATGATAAGATATTTACAAGGATTAATAATTTAATTCATGATTATAATTTAAT
AAATGAACATGAATTGATAGCTGTTGCATTGTCTGGAGGTAAAGACAGTGTTTTGACATTGCATGCTTTAAAAAATTATC
AAAATTATTTGGATTTTGATTTGGTTGCTGTTAGTGTTGATGAAGGTATTGAGGGTTACCGTCAGCATGGTATTGATGCA
GCTATTGACAATGCAGAAAAATTAGATGTCAAATTAGTTCAAAAATCATTTAAAATAGAAGAGGGATTTGCACTAGATGA
CATTTATAGCGGATTTAAAAGTGCATGCATTCCTTGCGGAGTTTTTAGAAGAAATATTTTAAATAAAACAGCATATGATC
TTGGAGCAGATAAAATAGCTACCGGACATAATCTTGATGATGAAATTCAGTCTTTTTTAATGAGTTTTGCCCGTGGTGAT
TTAATTAAATTCTCAAAATTCGGGCCTGAACTTGATGTTATTCATCCTAAGTTGATTCCACGTATTAAACCATTGTGGAA
CACTCCGGAAAAGGAAGTTGGAACCTGGGCAATTTTAAATGATATTAATATTCATTTAGATGAATGTCCTTATTCTCATT
TATCTCTGAGGGCTAAAATTAAGGAATTTTTAAATAATAATGAGGATATATATCCTGGAATAAAAAATAATATTATGGAA
TCCTTCCAAAAGATTTTAACCTTTGAAAGTGATATTCCATCTAATTTGAATGAGTGCAGGTTATGTGGAGAACCTACATC
TTCAGATATCTGCAAAGCCTGTGAGCTAAAAAAATTAATTTCTGAAAATCACGAAAGCCATATATAA

Upstream 100 bases:

>100_bases
TATCTTCAGTTCCAACAGGTAATATTGCGAAATCTGCAGTTATCATTTTTAATTCACCTAGTAAAATTATTTATTTATCT
TATTATAAATTTATTTAGTA

Downstream 100 bases:

>100_bases
TATGAATAGTCCTAATAGGATTATTCCTTCTTTTCTATCAAATTTACTTTGTGTTTTACCAAATATAAGGCATAAAATTG
TAACAATTATCATTAAACCT

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MVQLNKKEFNDKIFTRINNLIHDYNLINEHELIAVALSGGKDSVLTLHALKNYQNYLDFDLVAVSVDEGIEGYRQHGIDA
AIDNAEKLDVKLVQKSFKIEEGFALDDIYSGFKSACIPCGVFRRNILNKTAYDLGADKIATGHNLDDEIQSFLMSFARGD
LIKFSKFGPELDVIHPKLIPRIKPLWNTPEKEVGTWAILNDINIHLDECPYSHLSLRAKIKEFLNNNEDIYPGIKNNIME
SFQKILTFESDIPSNLNECRLCGEPTSSDICKACELKKLISENHESHI

Sequences:

>Translated_288_residues
MVQLNKKEFNDKIFTRINNLIHDYNLINEHELIAVALSGGKDSVLTLHALKNYQNYLDFDLVAVSVDEGIEGYRQHGIDA
AIDNAEKLDVKLVQKSFKIEEGFALDDIYSGFKSACIPCGVFRRNILNKTAYDLGADKIATGHNLDDEIQSFLMSFARGD
LIKFSKFGPELDVIHPKLIPRIKPLWNTPEKEVGTWAILNDINIHLDECPYSHLSLRAKIKEFLNNNEDIYPGIKNNIME
SFQKILTFESDIPSNLNECRLCGEPTSSDICKACELKKLISENHESHI
>Mature_288_residues
MVQLNKKEFNDKIFTRINNLIHDYNLINEHELIAVALSGGKDSVLTLHALKNYQNYLDFDLVAVSVDEGIEGYRQHGIDA
AIDNAEKLDVKLVQKSFKIEEGFALDDIYSGFKSACIPCGVFRRNILNKTAYDLGADKIATGHNLDDEIQSFLMSFARGD
LIKFSKFGPELDVIHPKLIPRIKPLWNTPEKEVGTWAILNDINIHLDECPYSHLSLRAKIKEFLNNNEDIYPGIKNNIME
SFQKILTFESDIPSNLNECRLCGEPTSSDICKACELKKLISENHESHI

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=259, Percent_Identity=30.5019305019305, Blast_Score=130, Evalue=2e-30,
Organism=Escherichia coli, GI1787606, Length=272, Percent_Identity=29.7794117647059, Blast_Score=94, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17540090, Length=270, Percent_Identity=32.2222222222222, Blast_Score=141, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI193211090, Length=252, Percent_Identity=25, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6321227, Length=135, Percent_Identity=36.2962962962963, Blast_Score=76, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24651972, Length=264, Percent_Identity=33.3333333333333, Blast_Score=141, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR000541
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 32669; Mature: 32669

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQLNKKEFNDKIFTRINNLIHDYNLINEHELIAVALSGGKDSVLTLHALKNYQNYLDFD
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCE
LVAVSVDEGIEGYRQHGIDAAIDNAEKLDVKLVQKSFKIEEGFALDDIYSGFKSACIPCG
EEEEEHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHH
VFRRNILNKTAYDLGADKIATGHNLDDEIQSFLMSFARGDLIKFSKFGPELDVIHPKLIP
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCHHHHH
RIKPLWNTPEKEVGTWAILNDINIHLDECPYSHLSLRAKIKEFLNNNEDIYPGIKNNIME
CCCCCCCCCCHHCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
SFQKILTFESDIPSNLNECRLCGEPTSSDICKACELKKLISENHESHI
HHHHHHHHCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVQLNKKEFNDKIFTRINNLIHDYNLINEHELIAVALSGGKDSVLTLHALKNYQNYLDFD
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCE
LVAVSVDEGIEGYRQHGIDAAIDNAEKLDVKLVQKSFKIEEGFALDDIYSGFKSACIPCG
EEEEEHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHH
VFRRNILNKTAYDLGADKIATGHNLDDEIQSFLMSFARGDLIKFSKFGPELDVIHPKLIP
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCHHHHH
RIKPLWNTPEKEVGTWAILNDINIHLDECPYSHLSLRAKIKEFLNNNEDIYPGIKNNIME
CCCCCCCCCCHHCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
SFQKILTFESDIPSNLNECRLCGEPTSSDICKACELKKLISENHESHI
HHHHHHHHCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]