| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642983
Identifier: 148642983
GI number: 148642983
Start: 886369
End: 887031
Strand: Reverse
Name: 148642983
Synonym: Msm_0923
Alternate gene names: NA
Gene position: 887031-886369 (Counterclockwise)
Preceding gene: 148642984
Following gene: 148642981
Centisome position: 47.87
GC content: 32.28
Gene sequence:
>663_bases ATGAAATTTTTTGCCATAAATGGTAGTCACAGAAAAGATGGAAATACTGCTCAGCTTTTAGAAAAAGCTTTGGAAGGAAT AAAATCAGTTTGCAGTGATGCTGAAATTGAATCAGTTAATTTATATGATGTTCCTTTTAATGGCTGCAAAAGCTGTTTTG CATGTAAAAAGATTAATGGTCGTCATTATGGAAAATGTGTTTATAAAGATGACTTTAAACCAATTTTGGAAGAAATTGTT CAGGCAGACGGTGTAATACTGGGATCTCCAGTTTACTTTGGTGATGTAAGTGGGGTAATGAGGTGCTTTTTAGAGCGTTT TATCTTTCCATTCTTTGTTTATGATGAGGATATGACTAGCTTAGCTCCAAAAAAGATGGCTATTGGATGTATTTACACTA TGAATCTTGATGAGGAAACTGCAAGACAATTTGGCTACCATGATTTATTCGATAAAAATGAATTTGTTTTGGAAAAGATG TTTACAAAACCGTTTCATCTTTATTCCTACGACACCTATCAGTTTGATTATTCAAAGTATAAAATGGATCTTTTTACTGA AGATGAAAAATTAAAAACACGTAAAATGCAGTTTCCGATTGATTTGGAAAATGCATTTAAATTAGGAGAAAAAATAGCTA TTGAAGCAAAACAACGCGGCTGA
Upstream 100 bases:
>100_bases GTCAAAGAATACTTGAAGAAGCAGGAATTCCATATGAAATTTCAATGGAAAAAGCAGCTAAAAAAGCTGTTGAGCTTTGT AATAAAATTAAGGCTGAAGA
Downstream 100 bases:
>100_bases CTTCAGATTCGTTAACTATTTTTTTACCGCAATTTTCTCCTATTTTTTGGGCAAAACTTTTGACTTCATCAAATGTTGGC ATATTGTCAGGGGTTAATCT
Product: multimeric flavodoxin
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MKFFAINGSHRKDGNTAQLLEKALEGIKSVCSDAEIESVNLYDVPFNGCKSCFACKKINGRHYGKCVYKDDFKPILEEIV QADGVILGSPVYFGDVSGVMRCFLERFIFPFFVYDEDMTSLAPKKMAIGCIYTMNLDEETARQFGYHDLFDKNEFVLEKM FTKPFHLYSYDTYQFDYSKYKMDLFTEDEKLKTRKMQFPIDLENAFKLGEKIAIEAKQRG
Sequences:
>Translated_220_residues MKFFAINGSHRKDGNTAQLLEKALEGIKSVCSDAEIESVNLYDVPFNGCKSCFACKKINGRHYGKCVYKDDFKPILEEIV QADGVILGSPVYFGDVSGVMRCFLERFIFPFFVYDEDMTSLAPKKMAIGCIYTMNLDEETARQFGYHDLFDKNEFVLEKM FTKPFHLYSYDTYQFDYSKYKMDLFTEDEKLKTRKMQFPIDLENAFKLGEKIAIEAKQRG >Mature_220_residues MKFFAINGSHRKDGNTAQLLEKALEGIKSVCSDAEIESVNLYDVPFNGCKSCFACKKINGRHYGKCVYKDDFKPILEEIV QADGVILGSPVYFGDVSGVMRCFLERFIFPFFVYDEDMTSLAPKKMAIGCIYTMNLDEETARQFGYHDLFDKNEFVLEKM FTKPFHLYSYDTYQFDYSKYKMDLFTEDEKLKTRKMQFPIDLENAFKLGEKIAIEAKQRG
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 25498; Mature: 25498
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFAINGSHRKDGNTAQLLEKALEGIKSVCSDAEIESVNLYDVPFNGCKSCFACKKING CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCC RHYGKCVYKDDFKPILEEIVQADGVILGSPVYFGDVSGVMRCFLERFIFPFFVYDEDMTS CCCCEEEECCCHHHHHHHHHHHCCEEECCCEEECCHHHHHHHHHHHHHHHEEEECCCHHH LAPKKMAIGCIYTMNLDEETARQFGYHDLFDKNEFVLEKMFTKPFHLYSYDTYQFDYSKY HCCCCEEEEEEEEECCCHHHHHHCCCHHCCCCCHHHHHHHHCCCEEEEEECEEEECHHHE KMDLFTEDEKLKTRKMQFPIDLENAFKLGEKIAIEAKQRG EEEEECCCHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCC >Mature Secondary Structure MKFFAINGSHRKDGNTAQLLEKALEGIKSVCSDAEIESVNLYDVPFNGCKSCFACKKING CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCC RHYGKCVYKDDFKPILEEIVQADGVILGSPVYFGDVSGVMRCFLERFIFPFFVYDEDMTS CCCCEEEECCCHHHHHHHHHHHCCEEECCCEEECCHHHHHHHHHHHHHHHEEEECCCHHH LAPKKMAIGCIYTMNLDEETARQFGYHDLFDKNEFVLEKMFTKPFHLYSYDTYQFDYSKY HCCCCEEEEEEEEECCCHHHHHHCCCHHCCCCCHHHHHHHHCCCEEEEEECEEEECHHHE KMDLFTEDEKLKTRKMQFPIDLENAFKLGEKIAIEAKQRG EEEEECCCHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]