Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642944

Identifier: 148642944

GI number: 148642944

Start: 840147

End: 842414

Strand: Reverse

Name: 148642944

Synonym: Msm_0884

Alternate gene names: NA

Gene position: 842414-840147 (Counterclockwise)

Preceding gene: 148642945

Following gene: 148642937

Centisome position: 45.46

GC content: 32.41

Gene sequence:

>2268_bases
ATGTTATTTTTCGTGATTATGGGATGCGTTTCTGCAAATGATTTATCAACATTAGGTGAAAATACTACTGTGCCTAATAT
TATAATTGTTGGTGATGCACCAGAAGTTCCAGATGTGCCTGACATTCCAGATATTCCGGATTTTCCAGTTGATCCTGATA
ATCCGGACATTGATGATCAAAATGATTCTGATACAGTTAATTTGACCATATTTAACATCGATGAATATTTTGTTGACGGT
ACTTTGGGGGTTGAGCATTCTAATACCAAATTTGTATTAACTCAAAACTTTGATAATTTAGGTCTTTTAAAAATTGAAGC
AAATAATGTAACTATTTTAGGTAATAATTTTACTTTGCAAAATGTTGCATTTTTGATTAATGGTAAAGATGTTACCTTAG
CTAATTTCACATTAGTTAATGATTTTGATTTCAAAGATGCTGATGGTGCGGCAATTCTTACATTGGCCAATAATACGCAT
ATACGTGATTGTGTTATAAATTATAATGTTCCTCGTGATAGTGAAGGTTACGGCATTTCTGCAGTTGGAAGAAGAATTGC
TCCAATTAGTGGTTTGGAAGTTATTAACTGTATAATCAACTTTGAAGGCCATAATTATAAGGCAAATACCTATAATTATG
CTTTAAAAGTAAGTAACTGTCCTAATGCATTAATTGCAAATAACAGTATTTATACTCAGCTTCCGTTGAGGGATGTTAAT
TTCGGAGCAGTTGGAGCTGATTTAAATTCTAATTATGTGGCAAGTGTAGGTATTGAGTACAGTAATAATTTAACATTTAT
CGGAAATATTGTTGCAAGTATTGTTAATAAAAGGCCAGGAAGTCCTTTCCCTACATTGGACGGTATAATTATTGCCGATT
CAAATGATTGTCTTGTTAAAAACAATACTTTGTATATGGAAGATTTCTTAACTTTCCCAGGTCTTAATAATTATCTTTAT
GGTATTGATGTATGGCGTGTAAATAGTTTGACATTAGATTCTAATAATATAGCTATTTTAACTACTGGCGGAATGTTATC
TGCCGGTACTGCATACCCTATACAAATTACCGGACCTTCTAAGAAGATAAATATAACTAATAATGATTTGTATTCAATAT
CTAACGGGCCAAACATAGGAATCTATTCACAAAATTATTATGGTGATACACAATTGTATATTGCTCATAATAAGATTAAC
GTGACAGGATTGGCAGGTAATGATAGCTGGGCACTTGTTGCAGGTATAGAAGTTCAGGATTCTAACGATACTATTATTAA
TAATACAATTGAAGTTCATAGTGTTGCGGAAGTTAAGGACAATGACAATATGTACGGTATAAGTTATTCTCAATCAACTA
AAGGTAACCATACATTTGTAATTAAAAATAATACAGTTACTAGTGATGCAAAATATGCGATTTCTCTAATAAGTGCTGAG
AATTCGGTTATTGTTGATAATTTATTAATATCTACTAGGAAAGATGCGAAAGCCAGTTATGATGCATTCAATACGAAAGG
AAAATTTTATAATACTTCATATTATAATAATCGTGTAGTCAATGCATTTGATTATTATGCGGAAATTTACAATCATGTTG
ACGGAGGTTCTGAATTTAATTATACGACTCCTACCAATGTGAACAATTTGACAAATAAGGTTGATGGTTCAAAAATAAAA
CCATGGTTCCCTGATTTCCCTAATAGAAATCCTTTACTTCCTAAACCTGGTGACGGAAGTAGTGTTATTGTAACTCCTGA
CGATGGTGATGATAAAAATCCAAATGTTCCAGATAGACCTGACGGTGATGCAGGTTATGTGGATGTCCCTGATTTATCTG
GTGATGATGGAGGATCAAAAAATCCGTCTAACGGCACTAGTAGTACAGATAAAAATTCTAACAAATTAGGTGTAAGTTTA
CTTGATGCTTTGATTAATTTCTTGAATTCAAATACAGACACTGGAGACTCAAGATCCAATTCATATGGTGGAACTGTTCG
TACAAATAGCAGTACTTCATCTAGTGACAGTCCAAGCCTTGACGGAAATCCATCTCCAGCAAGTAGCACAAAATCCTCTT
CAGGATCAAATGCAAAAAGTGCTGGAAGTTCTGCAGGTGATGACTCCAAATCTGTAAAAGCATATGAAATTGATAAAAAT
ATAATGAAAAGTAATCCGAATACAATTATTGCTTCTATTATATTAATTATAATCGTTGCTTTGTTAATATTTGTTGGATA
CAAACGCAGAAAATTAAACGAAGAATAA

Upstream 100 bases:

>100_bases
TTATAAAATGACTTATTTTAGTTTTAAAAGATTTTATTAAAACTAAAAAGAGGTGAAAAAGATTAAATTAAGTCGAAAAA
TAATAATTACATCTTTGTTA

Downstream 100 bases:

>100_bases
TTTAAAATTATGATTAGTCTTTATGACTATTCTTTTTCTTTTTTTATAAAAAATAGTAAAAATGTAGGTTTATAATCTAC
CTACTTTAATTAAAGATTCG

Product: adhesin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 755; Mature: 755

Protein sequence:

>755_residues
MLFFVIMGCVSANDLSTLGENTTVPNIIIVGDAPEVPDVPDIPDIPDFPVDPDNPDIDDQNDSDTVNLTIFNIDEYFVDG
TLGVEHSNTKFVLTQNFDNLGLLKIEANNVTILGNNFTLQNVAFLINGKDVTLANFTLVNDFDFKDADGAAILTLANNTH
IRDCVINYNVPRDSEGYGISAVGRRIAPISGLEVINCIINFEGHNYKANTYNYALKVSNCPNALIANNSIYTQLPLRDVN
FGAVGADLNSNYVASVGIEYSNNLTFIGNIVASIVNKRPGSPFPTLDGIIIADSNDCLVKNNTLYMEDFLTFPGLNNYLY
GIDVWRVNSLTLDSNNIAILTTGGMLSAGTAYPIQITGPSKKINITNNDLYSISNGPNIGIYSQNYYGDTQLYIAHNKIN
VTGLAGNDSWALVAGIEVQDSNDTIINNTIEVHSVAEVKDNDNMYGISYSQSTKGNHTFVIKNNTVTSDAKYAISLISAE
NSVIVDNLLISTRKDAKASYDAFNTKGKFYNTSYYNNRVVNAFDYYAEIYNHVDGGSEFNYTTPTNVNNLTNKVDGSKIK
PWFPDFPNRNPLLPKPGDGSSVIVTPDDGDDKNPNVPDRPDGDAGYVDVPDLSGDDGGSKNPSNGTSSTDKNSNKLGVSL
LDALINFLNSNTDTGDSRSNSYGGTVRTNSSTSSSDSPSLDGNPSPASSTKSSSGSNAKSAGSSAGDDSKSVKAYEIDKN
IMKSNPNTIIASIILIIIVALLIFVGYKRRKLNEE

Sequences:

>Translated_755_residues
MLFFVIMGCVSANDLSTLGENTTVPNIIIVGDAPEVPDVPDIPDIPDFPVDPDNPDIDDQNDSDTVNLTIFNIDEYFVDG
TLGVEHSNTKFVLTQNFDNLGLLKIEANNVTILGNNFTLQNVAFLINGKDVTLANFTLVNDFDFKDADGAAILTLANNTH
IRDCVINYNVPRDSEGYGISAVGRRIAPISGLEVINCIINFEGHNYKANTYNYALKVSNCPNALIANNSIYTQLPLRDVN
FGAVGADLNSNYVASVGIEYSNNLTFIGNIVASIVNKRPGSPFPTLDGIIIADSNDCLVKNNTLYMEDFLTFPGLNNYLY
GIDVWRVNSLTLDSNNIAILTTGGMLSAGTAYPIQITGPSKKINITNNDLYSISNGPNIGIYSQNYYGDTQLYIAHNKIN
VTGLAGNDSWALVAGIEVQDSNDTIINNTIEVHSVAEVKDNDNMYGISYSQSTKGNHTFVIKNNTVTSDAKYAISLISAE
NSVIVDNLLISTRKDAKASYDAFNTKGKFYNTSYYNNRVVNAFDYYAEIYNHVDGGSEFNYTTPTNVNNLTNKVDGSKIK
PWFPDFPNRNPLLPKPGDGSSVIVTPDDGDDKNPNVPDRPDGDAGYVDVPDLSGDDGGSKNPSNGTSSTDKNSNKLGVSL
LDALINFLNSNTDTGDSRSNSYGGTVRTNSSTSSSDSPSLDGNPSPASSTKSSSGSNAKSAGSSAGDDSKSVKAYEIDKN
IMKSNPNTIIASIILIIIVALLIFVGYKRRKLNEE
>Mature_755_residues
MLFFVIMGCVSANDLSTLGENTTVPNIIIVGDAPEVPDVPDIPDIPDFPVDPDNPDIDDQNDSDTVNLTIFNIDEYFVDG
TLGVEHSNTKFVLTQNFDNLGLLKIEANNVTILGNNFTLQNVAFLINGKDVTLANFTLVNDFDFKDADGAAILTLANNTH
IRDCVINYNVPRDSEGYGISAVGRRIAPISGLEVINCIINFEGHNYKANTYNYALKVSNCPNALIANNSIYTQLPLRDVN
FGAVGADLNSNYVASVGIEYSNNLTFIGNIVASIVNKRPGSPFPTLDGIIIADSNDCLVKNNTLYMEDFLTFPGLNNYLY
GIDVWRVNSLTLDSNNIAILTTGGMLSAGTAYPIQITGPSKKINITNNDLYSISNGPNIGIYSQNYYGDTQLYIAHNKIN
VTGLAGNDSWALVAGIEVQDSNDTIINNTIEVHSVAEVKDNDNMYGISYSQSTKGNHTFVIKNNTVTSDAKYAISLISAE
NSVIVDNLLISTRKDAKASYDAFNTKGKFYNTSYYNNRVVNAFDYYAEIYNHVDGGSEFNYTTPTNVNNLTNKVDGSKIK
PWFPDFPNRNPLLPKPGDGSSVIVTPDDGDDKNPNVPDRPDGDAGYVDVPDLSGDDGGSKNPSNGTSSTDKNSNKLGVSL
LDALINFLNSNTDTGDSRSNSYGGTVRTNSSTSSSDSPSLDGNPSPASSTKSSSGSNAKSAGSSAGDDSKSVKAYEIDKN
IMKSNPNTIIASIILIIIVALLIFVGYKRRKLNEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81443; Mature: 81443

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFFVIMGCVSANDLSTLGENTTVPNIIIVGDAPEVPDVPDIPDIPDFPVDPDNPDIDDQ
CEEEEEEECCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NDSDTVNLTIFNIDEYFVDGTLGVEHSNTKFVLTQNFDNLGLLKIEANNVTILGNNFTLQ
CCCCEEEEEEEECHHEEECCEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCEEEE
NVAFLINGKDVTLANFTLVNDFDFKDADGAAILTLANNTHIRDCVINYNVPRDSEGYGIS
EEEEEEECCEEEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCHH
AVGRRIAPISGLEVINCIINFEGHNYKANTYNYALKVSNCPNALIANNSIYTQLPLRDVN
HHCCCCCCCCCCEEEEEEEEECCCCEECCEEEEEEEECCCCCEEEECCEEEEEECCEECC
FGAVGADLNSNYVASVGIEYSNNLTFIGNIVASIVNKRPGSPFPTLDGIIIADSNDCLVK
CCEEECCCCCCEEEEEEEEECCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEE
NNTLYMEDFLTFPGLNNYLYGIDVWRVNSLTLDSNNIAILTTGGMLSAGTAYPIQITGPS
CCEEEEEHHHCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCEECCCEEEEEEECCC
KKINITNNDLYSISNGPNIGIYSQNYYGDTQLYIAHNKINVTGLAGNDSWALVAGIEVQD
CEEEECCCCEEEECCCCCEEEEECCCCCCEEEEEEECEEEEEEECCCCCEEEEEEEEEEC
SNDTIINNTIEVHSVAEVKDNDNMYGISYSQSTKGNHTFVIKNNTVTSDAKYAISLISAE
CCCEEEECEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCEECCCCEEEEEEEECC
NSVIVDNLLISTRKDAKASYDAFNTKGKFYNTSYYNNRVVNAFDYYAEIYNHVDGGSEFN
CCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCC
YTTPTNVNNLTNKVDGSKIKPWFPDFPNRNPLLPKPGDGSSVIVTPDDGDDKNPNVPDRP
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
DGDAGYVDVPDLSGDDGGSKNPSNGTSSTDKNSNKLGVSLLDALINFLNSNTDTGDSRSN
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
SYGGTVRTNSSTSSSDSPSLDGNPSPASSTKSSSGSNAKSAGSSAGDDSKSVKAYEIDKN
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHH
IMKSNPNTIIASIILIIIVALLIFVGYKRRKLNEE
HHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure
MLFFVIMGCVSANDLSTLGENTTVPNIIIVGDAPEVPDVPDIPDIPDFPVDPDNPDIDDQ
CEEEEEEECCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NDSDTVNLTIFNIDEYFVDGTLGVEHSNTKFVLTQNFDNLGLLKIEANNVTILGNNFTLQ
CCCCEEEEEEEECHHEEECCEEEEECCCCEEEEEECCCCEEEEEEECCCEEEEECCEEEE
NVAFLINGKDVTLANFTLVNDFDFKDADGAAILTLANNTHIRDCVINYNVPRDSEGYGIS
EEEEEEECCEEEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCHH
AVGRRIAPISGLEVINCIINFEGHNYKANTYNYALKVSNCPNALIANNSIYTQLPLRDVN
HHCCCCCCCCCCEEEEEEEEECCCCEECCEEEEEEEECCCCCEEEECCEEEEEECCEECC
FGAVGADLNSNYVASVGIEYSNNLTFIGNIVASIVNKRPGSPFPTLDGIIIADSNDCLVK
CCEEECCCCCCEEEEEEEEECCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEE
NNTLYMEDFLTFPGLNNYLYGIDVWRVNSLTLDSNNIAILTTGGMLSAGTAYPIQITGPS
CCEEEEEHHHCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCEECCCEEEEEEECCC
KKINITNNDLYSISNGPNIGIYSQNYYGDTQLYIAHNKINVTGLAGNDSWALVAGIEVQD
CEEEECCCCEEEECCCCCEEEEECCCCCCEEEEEEECEEEEEEECCCCCEEEEEEEEEEC
SNDTIINNTIEVHSVAEVKDNDNMYGISYSQSTKGNHTFVIKNNTVTSDAKYAISLISAE
CCCEEEECEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCEECCCCEEEEEEEECC
NSVIVDNLLISTRKDAKASYDAFNTKGKFYNTSYYNNRVVNAFDYYAEIYNHVDGGSEFN
CCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHCCCCCCCC
YTTPTNVNNLTNKVDGSKIKPWFPDFPNRNPLLPKPGDGSSVIVTPDDGDDKNPNVPDRP
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
DGDAGYVDVPDLSGDDGGSKNPSNGTSSTDKNSNKLGVSLLDALINFLNSNTDTGDSRSN
CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
SYGGTVRTNSSTSSSDSPSLDGNPSPASSTKSSSGSNAKSAGSSAGDDSKSVKAYEIDKN
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHH
IMKSNPNTIIASIILIIIVALLIFVGYKRRKLNEE
HHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA