Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148642844

Identifier: 148642844

GI number: 148642844

Start: 744702

End: 744893

Strand: Reverse

Name: 148642844

Synonym: Msm_0784

Alternate gene names: NA

Gene position: 744893-744702 (Counterclockwise)

Preceding gene: 148642845

Following gene: 148642843

Centisome position: 40.2

GC content: 37.5

Gene sequence:

>192_bases
ATGGCAGTAAAAATAGATTCAGATCTTTGCGGTCACATTGAAAATTGTCCAGTACAAGGTTTATGTGTAAAGATTTGTGA
ACAAGGCGCTCTCATTGAAGAAGATGGCGATGTAACTATTGTCCCTGAAAAATGCGATGACTGTGACCTTTGTATCCAAA
ACTGTCCTAATCAAGCTATATCTAAAGCATGA

Upstream 100 bases:

>100_bases
AAATCGACATGTTTATATATGCAGTTCGACAATGTATTAATTGATATTAAAATATTATTTTTTCATAAAATAATTTTCAT
ATCAAATTTGAGGTGGTTAT

Downstream 100 bases:

>100_bases
GGGATTTTATGTTTAATGTTGAGAGGAGCGGGGAAGAAACCCGTAAGTTATCACATAACAATGATAGGTGTGTAGGTTGT
GGAATTTGTACTGATGTATG

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MAVKIDSDLCGHIENCPVQGLCVKICEQGALIEEDGDVTIVPEKCDDCDLCIQNCPNQAISKA

Sequences:

>Translated_63_residues
MAVKIDSDLCGHIENCPVQGLCVKICEQGALIEEDGDVTIVPEKCDDCDLCIQNCPNQAISKA
>Mature_62_residues
AVKIDSDLCGHIENCPVQGLCVKICEQGALIEEDGDVTIVPEKCDDCDLCIQNCPNQAISKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6750; Mature: 6619

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

12.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
14.3 %Cys+Met (Translated Protein)
12.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
12.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKIDSDLCGHIENCPVQGLCVKICEQGALIEEDGDVTIVPEKCDDCDLCIQNCPNQAI
CEEEECCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEECCCCCCHHHHHHCCCCCCC
SKA
CCC
>Mature Secondary Structure 
AVKIDSDLCGHIENCPVQGLCVKICEQGALIEEDGDVTIVPEKCDDCDLCIQNCPNQAI
EEEECCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEECCCCCCHHHHHHCCCCCCC
SKA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA