| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642844
Identifier: 148642844
GI number: 148642844
Start: 744702
End: 744893
Strand: Reverse
Name: 148642844
Synonym: Msm_0784
Alternate gene names: NA
Gene position: 744893-744702 (Counterclockwise)
Preceding gene: 148642845
Following gene: 148642843
Centisome position: 40.2
GC content: 37.5
Gene sequence:
>192_bases ATGGCAGTAAAAATAGATTCAGATCTTTGCGGTCACATTGAAAATTGTCCAGTACAAGGTTTATGTGTAAAGATTTGTGA ACAAGGCGCTCTCATTGAAGAAGATGGCGATGTAACTATTGTCCCTGAAAAATGCGATGACTGTGACCTTTGTATCCAAA ACTGTCCTAATCAAGCTATATCTAAAGCATGA
Upstream 100 bases:
>100_bases AAATCGACATGTTTATATATGCAGTTCGACAATGTATTAATTGATATTAAAATATTATTTTTTCATAAAATAATTTTCAT ATCAAATTTGAGGTGGTTAT
Downstream 100 bases:
>100_bases GGGATTTTATGTTTAATGTTGAGAGGAGCGGGGAAGAAACCCGTAAGTTATCACATAACAATGATAGGTGTGTAGGTTGT GGAATTTGTACTGATGTATG
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MAVKIDSDLCGHIENCPVQGLCVKICEQGALIEEDGDVTIVPEKCDDCDLCIQNCPNQAISKA
Sequences:
>Translated_63_residues MAVKIDSDLCGHIENCPVQGLCVKICEQGALIEEDGDVTIVPEKCDDCDLCIQNCPNQAISKA >Mature_62_residues AVKIDSDLCGHIENCPVQGLCVKICEQGALIEEDGDVTIVPEKCDDCDLCIQNCPNQAISKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6750; Mature: 6619
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
12.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 14.3 %Cys+Met (Translated Protein) 12.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 12.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKIDSDLCGHIENCPVQGLCVKICEQGALIEEDGDVTIVPEKCDDCDLCIQNCPNQAI CEEEECCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEECCCCCCHHHHHHCCCCCCC SKA CCC >Mature Secondary Structure AVKIDSDLCGHIENCPVQGLCVKICEQGALIEEDGDVTIVPEKCDDCDLCIQNCPNQAI EEEECCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEECCCCCCHHHHHHCCCCCCC SKA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA