| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642786
Identifier: 148642786
GI number: 148642786
Start: 695513
End: 696163
Strand: Reverse
Name: 148642786
Synonym: Msm_0726
Alternate gene names: NA
Gene position: 696163-695513 (Counterclockwise)
Preceding gene: 148642787
Following gene: 148642780
Centisome position: 37.57
GC content: 31.34
Gene sequence:
>651_bases ATGTCTTATTTCAGATATGTTGACAATGGTGAAGGTCCAACTAAGTTATTTATAGGTGGAGTCCATGGCAATGAAGGTAA AACTTCTTTAAAATTTATTAAACGTTTGAATATTGATGATTTTTCAAAAGGACAGTTTTATTTTTACAATTTTGATAAAA CTCCATATATTTCTACAATTAAAAAGGAATATTATAAATCAGAAATCGGTTTGAAGATTTTGGATCTGATTGAGTATTTT GAACCTGATTTTTATACTGAACTTCACTGTTACGATCTGGCGCATTTTGACAGATTAACTTCTATGGAACGTTACACTAA AACAGGAATTCCTCCATTAATAAATTTGGGAAATCATGTGCTGGTAAGTTCTGTTTCTCCATTAATTCGCATGACATATT TTTCAACTGACACTGTTTGCAAAACATTGGAATTTCCTTGTGTTGAAAAGCTGTCTGCAGAAAAAGAAGAAAAATATAAT TTCAATAAAAAATCAGCTGTTGAAACCTATGAAAAGCTTCTTAATTTAATTGTCAGAGCACCGGACAGGGAGTATTTTGA AAAGGAAATGCTGAAAAATTATTATAATCAGGTTGCACTGGCTGTTGATTATGCCAAAAAAGTATTTGGTCCGGAGTTTC CCCCTTATTAG
Upstream 100 bases:
>100_bases ATTGATACTTTATCTGACCGCCAAAAAGAGTATATGTGCAGCTGGAAAGAAGGAACTTAAGTTTTCTTCTTTGATTTTTT CTTTTTTTTATTTGGATAAT
Downstream 100 bases:
>100_bases AACCAGTCTTCAAGGCTTTTCTGACTTGAATTTAAATTTTTTAATTTATCACAGGCTTTTGAAACTCTGTCCTGTGAAAA ACCGTGTTCTTCACATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSYFRYVDNGEGPTKLFIGGVHGNEGKTSLKFIKRLNIDDFSKGQFYFYNFDKTPYISTIKKEYYKSEIGLKILDLIEYF EPDFYTELHCYDLAHFDRLTSMERYTKTGIPPLINLGNHVLVSSVSPLIRMTYFSTDTVCKTLEFPCVEKLSAEKEEKYN FNKKSAVETYEKLLNLIVRAPDREYFEKEMLKNYYNQVALAVDYAKKVFGPEFPPY
Sequences:
>Translated_216_residues MSYFRYVDNGEGPTKLFIGGVHGNEGKTSLKFIKRLNIDDFSKGQFYFYNFDKTPYISTIKKEYYKSEIGLKILDLIEYF EPDFYTELHCYDLAHFDRLTSMERYTKTGIPPLINLGNHVLVSSVSPLIRMTYFSTDTVCKTLEFPCVEKLSAEKEEKYN FNKKSAVETYEKLLNLIVRAPDREYFEKEMLKNYYNQVALAVDYAKKVFGPEFPPY >Mature_215_residues SYFRYVDNGEGPTKLFIGGVHGNEGKTSLKFIKRLNIDDFSKGQFYFYNFDKTPYISTIKKEYYKSEIGLKILDLIEYFE PDFYTELHCYDLAHFDRLTSMERYTKTGIPPLINLGNHVLVSSVSPLIRMTYFSTDTVCKTLEFPCVEKLSAEKEEKYNF NKKSAVETYEKLLNLIVRAPDREYFEKEMLKNYYNQVALAVDYAKKVFGPEFPPY
Specific function: Unknown
COG id: COG4073
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019218 - InterPro: IPR012026 [H]
Pfam domain/function: PF09892 DUF2119 [H]
EC number: NA
Molecular weight: Translated: 25363; Mature: 25232
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYFRYVDNGEGPTKLFIGGVHGNEGKTSLKFIKRLNIDDFSKGQFYFYNFDKTPYISTI CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHH KKEYYKSEIGLKILDLIEYFEPDFYTELHCYDLAHFDRLTSMERYTKTGIPPLINLGNHV HHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCH LVSSVSPLIRMTYFSTDTVCKTLEFPCVEKLSAEKEEKYNFNKKSAVETYEKLLNLIVRA HHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCC PDREYFEKEMLKNYYNQVALAVDYAKKVFGPEFPPY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SYFRYVDNGEGPTKLFIGGVHGNEGKTSLKFIKRLNIDDFSKGQFYFYNFDKTPYISTI CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHH KKEYYKSEIGLKILDLIEYFEPDFYTELHCYDLAHFDRLTSMERYTKTGIPPLINLGNHV HHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCH LVSSVSPLIRMTYFSTDTVCKTLEFPCVEKLSAEKEEKYNFNKKSAVETYEKLLNLIVRA HHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCC PDREYFEKEMLKNYYNQVALAVDYAKKVFGPEFPPY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]