Click here to switch to the map view.

The map label for this gene is 148642770

Identifier: 148642770

GI number: 148642770

Start: 679794

End: 680051

Strand: Reverse

Name: 148642770

Synonym: Msm_0710

Alternate gene names: NA

Gene position: 680051-679794 (Counterclockwise)

Preceding gene: 148642771

Following gene: 148642769

Centisome position: 36.7

GC content: 30.23

Gene sequence:

>258_bases
ATGAGTCAATCAAAAAAAGAAATGATGAATAGAGCTCTTTCCGCTATGACAATGAATATTGGTAAGGCTGGTGTTAATGA
CAATGTCATTGAAGAAATCAAACGCCAACTTAAAGCTAATGAAATTGTTAAACTTAAATTTGCAAAAAATATCGCTAAAA
ATAAAGATGATTATATAGCTGACATTGTCCAGAAAACCAGATCTAAACTTATAGATGTTAGAGGAAATGTCGCTGTCATT
TATAAAAAAAAGCCTTAG

Upstream 100 bases:

>100_bases
CGGCTGGTTAACGAAGAAGTTAACATTTTATGTGGCGAGTGTGGGCATGTTATGAAAATTCCTTATCATAAGGAGAAAAA
AAATAAAAGGAGAGCTAGAT

Downstream 100 bases:

>100_bases
AAAACATTGCTTAAATTTAGAGTTACAGGCCCTATTTTTATTAGGTCTTAAATTTACAGTTGATTATGAGGACAATTATT
TAAAATTAAATATTGGAGAA

Product: RNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MSQSKKEMMNRALSAMTMNIGKAGVNDNVIEEIKRQLKANEIVKLKFAKNIAKNKDDYIADIVQKTRSKLIDVRGNVAVI
YKKKP

Sequences:

>Translated_85_residues
MSQSKKEMMNRALSAMTMNIGKAGVNDNVIEEIKRQLKANEIVKLKFAKNIAKNKDDYIADIVQKTRSKLIDVRGNVAVI
YKKKP
>Mature_84_residues
SQSKKEMMNRALSAMTMNIGKAGVNDNVIEEIKRQLKANEIVKLKFAKNIAKNKDDYIADIVQKTRSKLIDVRGNVAVIY
KKKP

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9637; Mature: 9505

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSKKEMMNRALSAMTMNIGKAGVNDNVIEEIKRQLKANEIVKLKFAKNIAKNKDDYIA
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHH
DIVQKTRSKLIDVRGNVAVIYKKKP
HHHHHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure 
SQSKKEMMNRALSAMTMNIGKAGVNDNVIEEIKRQLKANEIVKLKFAKNIAKNKDDYIA
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHH
DIVQKTRSKLIDVRGNVAVIYKKKP
HHHHHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA