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The map label for this gene is rps19e [H]

Identifier: 148642769

GI number: 148642769

Start: 679251

End: 679688

Strand: Reverse

Name: rps19e [H]

Synonym: Msm_0709

Alternate gene names: 148642769

Gene position: 679688-679251 (Counterclockwise)

Preceding gene: 148642770

Following gene: 148642768

Centisome position: 36.68

GC content: 36.53

Gene sequence:

>438_bases
ATGACTACTGTATTTGATGTACCTGCAGATTTATTAATTAAAAAAGTCGCAGAAGAATTTAAAAACAATGATAAAATCAA
TTCCCCTGCATGGTCCAATTTTGTAAAAACCGGTGTTCACAAAGAAAGAAAACCTGAAGATGTCGACTGGTGGTATACCA
GATGTGCATCTATCATCAGAAGAGTGTACATGGACGGACCTGTAGGAGTTATGAGCTTAAGAACTTTCTACGGTGGTAAA
AAAGACCGTGGAGTAACTCCTGAAGTATTCAGAAAAGGTAGTGGAGCTATCGTAAGAAACGCGCTACACCAATTAGAAGA
TGCAGGATATGTTGAAAAAGTTGTAGGTGGAAGAGTTGTTACTCCAGCAGGAAGATCATTCTTAGATAAAATTTCTGCTG
AAATCATTAAGGATATTCCTAATCTTGCAAAATATTAA

Upstream 100 bases:

>100_bases
ATTGCTTAAATTTAGAGTTACAGGCCCTATTTTTATTAGGTCTTAAATTTACAGTTGATTATGAGGACAATTATTTAAAA
TTAAATATTGGAGAATTAAT

Downstream 100 bases:

>100_bases
TTAAATTATTCGGAGAGTTTGATATGAGTGATCTTGATGAAATTCGCCGCAAAAGAATGGCGGAATTAGAAGCCAGACAA
GCTGCTGCACAAGGTCAAAT

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MTTVFDVPADLLIKKVAEEFKNNDKINSPAWSNFVKTGVHKERKPEDVDWWYTRCASIIRRVYMDGPVGVMSLRTFYGGK
KDRGVTPEVFRKGSGAIVRNALHQLEDAGYVEKVVGGRVVTPAGRSFLDKISAEIIKDIPNLAKY

Sequences:

>Translated_145_residues
MTTVFDVPADLLIKKVAEEFKNNDKINSPAWSNFVKTGVHKERKPEDVDWWYTRCASIIRRVYMDGPVGVMSLRTFYGGK
KDRGVTPEVFRKGSGAIVRNALHQLEDAGYVEKVVGGRVVTPAGRSFLDKISAEIIKDIPNLAKY
>Mature_144_residues
TTVFDVPADLLIKKVAEEFKNNDKINSPAWSNFVKTGVHKERKPEDVDWWYTRCASIIRRVYMDGPVGVMSLRTFYGGKK
DRGVTPEVFRKGSGAIVRNALHQLEDAGYVEKVVGGRVVTPAGRSFLDKISAEIIKDIPNLAKY

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=134, Percent_Identity=39.5522388059701, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17508697, Length=136, Percent_Identity=39.7058823529412, Blast_Score=102, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6324451, Length=138, Percent_Identity=37.6811594202899, Blast_Score=88, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6324027, Length=138, Percent_Identity=37.6811594202899, Blast_Score=88, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24649452, Length=135, Percent_Identity=40.7407407407407, Blast_Score=103, Evalue=5e-23,
Organism=Drosophila melanogaster, GI17647891, Length=135, Percent_Identity=40.7407407407407, Blast_Score=97, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24642576, Length=135, Percent_Identity=40.7407407407407, Blast_Score=97, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24642574, Length=135, Percent_Identity=40.7407407407407, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- InterPro:   IPR011991
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 16288; Mature: 16157

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00628 RIBOSOMAL_S19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVFDVPADLLIKKVAEEFKNNDKINSPAWSNFVKTGVHKERKPEDVDWWYTRCASIIR
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
RVYMDGPVGVMSLRTFYGGKKDRGVTPEVFRKGSGAIVRNALHQLEDAGYVEKVVGGRVV
HHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCHHHHHHHCCEEE
TPAGRSFLDKISAEIIKDIPNLAKY
CCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTVFDVPADLLIKKVAEEFKNNDKINSPAWSNFVKTGVHKERKPEDVDWWYTRCASIIR
CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
RVYMDGPVGVMSLRTFYGGKKDRGVTPEVFRKGSGAIVRNALHQLEDAGYVEKVVGGRVV
HHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCHHHHHHHCCEEE
TPAGRSFLDKISAEIIKDIPNLAKY
CCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]