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The map label for this gene is yrdA [C]

Identifier: 148642714

GI number: 148642714

Start: 634690

End: 635166

Strand: Reverse

Name: yrdA [C]

Synonym: Msm_0654

Alternate gene names: 148642714

Gene position: 635166-634690 (Counterclockwise)

Preceding gene: 148642715

Following gene: 148642713

Centisome position: 34.27

GC content: 35.01

Gene sequence:

>477_bases
ATGGAAAATAAAAAAGACTCTGTTGTAATATGTCCAGGTGCACAAGTACTCGGTGATGTTGAATTAGGTGAAGATGTATC
AATTTGGCACGGAGCTGTTGTTAGAGGAGATGTGGATTCTATTAAAATAGGTAACAACTCTAATGTACAGGATAACTGTG
TATTACATTGTACTGAAGATTTCCCGATAACAATTGGGGATAATGTATCTGTAGGTCATGGTGCTGTTGTTCATGGATGT
ACTTTGGAAGACAATGTACTAATTGGAATGAATGCAACTGTGTTAAATGGAGCACACATTGGTAAAAATTCTATTGTAGG
GGCTGGAGCTGTTGTAAGTGAAGGTAAAGAATTCCCTGAAGGCAGTCTAATTTTAGGAGTTCCTGGCAAACTAATAAAGG
AAGTTACTCCTGAACAAATTGAACATATTCAAGAAAATGCAGATAATTACAAAAAACTTTCAAAACAATATAAATAA

Upstream 100 bases:

>100_bases
TGCTGTTATACGAAGATTTGCCTTCCGATACAAGAGTATTGGAAAAACAAACTCATATTATTCAAAAGAAAAAGAAAAAA
ATTAATTAAATGGTGATATT

Downstream 100 bases:

>100_bases
GGTTAAAAAATGAAACCAAGGGCAATAGTTAGTGAAATGGATTCCTATGTTCCAGGTAAATCTCAGGATGAGATAGCTAG
TGAATTCAACTTAAATAAAG

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MENKKDSVVICPGAQVLGDVELGEDVSIWHGAVVRGDVDSIKIGNNSNVQDNCVLHCTEDFPITIGDNVSVGHGAVVHGC
TLEDNVLIGMNATVLNGAHIGKNSIVGAGAVVSEGKEFPEGSLILGVPGKLIKEVTPEQIEHIQENADNYKKLSKQYK

Sequences:

>Translated_158_residues
MENKKDSVVICPGAQVLGDVELGEDVSIWHGAVVRGDVDSIKIGNNSNVQDNCVLHCTEDFPITIGDNVSVGHGAVVHGC
TLEDNVLIGMNATVLNGAHIGKNSIVGAGAVVSEGKEFPEGSLILGVPGKLIKEVTPEQIEHIQENADNYKKLSKQYK
>Mature_158_residues
MENKKDSVVICPGAQVLGDVELGEDVSIWHGAVVRGDVDSIKIGNNSNVQDNCVLHCTEDFPITIGDNVSVGHGAVVHGC
TLEDNVLIGMNATVLNGAHIGKNSIVGAGAVVSEGKEFPEGSLILGVPGKLIKEVTPEQIEHIQENADNYKKLSKQYK

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=158, Percent_Identity=38.6075949367089, Blast_Score=120, Evalue=5e-29,
Organism=Escherichia coli, GI1787667, Length=147, Percent_Identity=39.4557823129252, Blast_Score=116, Evalue=9e-28,
Organism=Escherichia coli, GI87081681, Length=147, Percent_Identity=32.6530612244898, Blast_Score=98, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: NA

Molecular weight: Translated: 16711; Mature: 16711

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKKDSVVICPGAQVLGDVELGEDVSIWHGAVVRGDVDSIKIGNNSNVQDNCVLHCTED
CCCCCCCEEECCCHHHEECCCCCCCCEEECCEEEECCCCEEEECCCCCCCCCEEEEECCC
FPITIGDNVSVGHGAVVHGCTLEDNVLIGMNATVLNGAHIGKNSIVGAGAVVSEGKEFPE
CCEEECCCCCCCCCEEEECCCCCCCEEEECCCEEECCCCCCCCCCEECCCEECCCCCCCC
GSLILGVPGKLIKEVTPEQIEHIQENADNYKKLSKQYK
CCEEEECCHHHHHHCCHHHHHHHHHCHHHHHHHHHHCC
>Mature Secondary Structure
MENKKDSVVICPGAQVLGDVELGEDVSIWHGAVVRGDVDSIKIGNNSNVQDNCVLHCTED
CCCCCCCEEECCCHHHEECCCCCCCCEEECCEEEECCCCEEEECCCCCCCCCEEEEECCC
FPITIGDNVSVGHGAVVHGCTLEDNVLIGMNATVLNGAHIGKNSIVGAGAVVSEGKEFPE
CCEEECCCCCCCCCEEEECCCCCCCEEEECCCEEECCCCCCCCCCEECCCEECCCCCCCC
GSLILGVPGKLIKEVTPEQIEHIQENADNYKKLSKQYK
CCEEEECCHHHHHHCCHHHHHHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]