Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642595

Identifier: 148642595

GI number: 148642595

Start: 510121

End: 510648

Strand: Reverse

Name: 148642595

Synonym: Msm_0535

Alternate gene names: NA

Gene position: 510648-510121 (Counterclockwise)

Preceding gene: 148642596

Following gene: 148642591

Centisome position: 27.56

GC content: 22.54

Gene sequence:

>528_bases
ATGATAAATACATGGGGAAAAGAAGAAATTACAAAGTTAAATTATGAATTTAGACAAGATGGAATATATGATAAAAAAAC
TTCAAAAAAGTTAAAATTAAAATTTCTTGAATATAATCAGGGACTATCAATGAATTTTGGTTTTTCAAGACATAATATTA
ACATTGATTTTGAAAAAAAGATAATGGAAGGCTGTATAAATAAAAATATGACGAATAAAGATATTGAAATAGTATTTGAA
TTACTTGAAAAATATCATATTTATCAATTAAATAGTGGAAAATATTGGAAAAAATTAACTTATCATTCGTCATCGTATTT
TGATGGATATGAATGGAGTCTTTATCTAGTCTTTGAAAGAGATAAATATTTGCGGATTTTTAATGGTAATGATTATCCAG
ATATTTTCACGCATTTAGCTCAGGAGATCATTGATTTAACAGGAAAAGATATTTTAAATGTAAATTCTATCGATGAAAAA
GATTTTAAATTATATAAAAAATATGGGGATGAAATATTAAATGAATAA

Upstream 100 bases:

>100_bases
TCCGAATCAATAATATTGAATCCAGAAATGTTTAAAAGCTAATATGGATATTTCAAGAAATATTCCACATATAAAAAAAA
TATCTGGAGGGAATATATGA

Downstream 100 bases:

>100_bases
ATGGATGATGCCATAAATAATAAAATTTTAGTATGGATTATAACTTGAGATTAATAAAAAATTAAGATAAAACTTTGAAA
ATGTGATTTCAATGGAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MINTWGKEEITKLNYEFRQDGIYDKKTSKKLKLKFLEYNQGLSMNFGFSRHNINIDFEKKIMEGCINKNMTNKDIEIVFE
LLEKYHIYQLNSGKYWKKLTYHSSSYFDGYEWSLYLVFERDKYLRIFNGNDYPDIFTHLAQEIIDLTGKDILNVNSIDEK
DFKLYKKYGDEILNE

Sequences:

>Translated_175_residues
MINTWGKEEITKLNYEFRQDGIYDKKTSKKLKLKFLEYNQGLSMNFGFSRHNINIDFEKKIMEGCINKNMTNKDIEIVFE
LLEKYHIYQLNSGKYWKKLTYHSSSYFDGYEWSLYLVFERDKYLRIFNGNDYPDIFTHLAQEIIDLTGKDILNVNSIDEK
DFKLYKKYGDEILNE
>Mature_175_residues
MINTWGKEEITKLNYEFRQDGIYDKKTSKKLKLKFLEYNQGLSMNFGFSRHNINIDFEKKIMEGCINKNMTNKDIEIVFE
LLEKYHIYQLNSGKYWKKLTYHSSSYFDGYEWSLYLVFERDKYLRIFNGNDYPDIFTHLAQEIIDLTGKDILNVNSIDEK
DFKLYKKYGDEILNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21133; Mature: 21133

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINTWGKEEITKLNYEFRQDGIYDKKTSKKLKLKFLEYNQGLSMNFGFSRHNINIDFEKK
CCCCCCCHHHHHHCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEECCCEECEECCCHHHH
IMEGCINKNMTNKDIEIVFELLEKYHIYQLNSGKYWKKLTYHSSSYFDGYEWSLYLVFER
HHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEEEC
DKYLRIFNGNDYPDIFTHLAQEIIDLTGKDILNVNSIDEKDFKLYKKYGDEILNE
CCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINTWGKEEITKLNYEFRQDGIYDKKTSKKLKLKFLEYNQGLSMNFGFSRHNINIDFEKK
CCCCCCCHHHHHHCHHHHCCCCCCCCCCCEEEEEEEECCCCCEEECCCEECEECCCHHHH
IMEGCINKNMTNKDIEIVFELLEKYHIYQLNSGKYWKKLTYHSSSYFDGYEWSLYLVFER
HHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEEEC
DKYLRIFNGNDYPDIFTHLAQEIIDLTGKDILNVNSIDEKDFKLYKKYGDEILNE
CCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA