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The map label for this gene is ybaW [C]

Identifier: 148361178

GI number: 148361178

Start: 3412612

End: 3413004

Strand: Direct

Name: ybaW [C]

Synonym: LPC_3152

Alternate gene names: 148361178

Gene position: 3412612-3413004 (Clockwise)

Preceding gene: 148361177

Following gene: 148361185

Centisome position: 95.42

GC content: 38.68

Gene sequence:

>393_bases
ATGACTGAAATAAACAAAATAATACATAAAAAAACTTTTGATATCGCTTGGGGCGATATGGATGCATTAGGACATGTTAA
CAATGCTCGTTATTTTGACTATTTTCAGGAAGCCCGGATTGATTGGCTCCGGGAGCTTGACATCAAAATGACAGGTCAAA
CAGGTCCTGTTGTCATCCATGTGGCTTGTACCTTTCTGAAACCAATCGTTTATCCTGCCACTGTAACCATACACAGCAAG
GCACATAGTCTTGGCAATTCCAGCATGATTATGGATCATGATTTGTATCAGGAAGAAACGCTTATGGCACAAGGTGTGAG
TAAAATAGTTTGGATTGATTATACCCAAAATAAATCCGTGCCTTTGCCTGATATTATTAGGAATTTAGTGTAG

Upstream 100 bases:

>100_bases
TTCTAAAAAGTTCATTGACGCAATTGAGAGAGTGGTTAACAATGAATAAATTAAGTAATGGCATCCGCTGGAATGTGGAT
GTTGATCCTATGGACTTATC

Downstream 100 bases:

>100_bases
AGCCTATTCGGACAATCGCTCTCTTACGGTCACGGCTCAGTTTTAGTTATAATCCGAGCTGCGACCGTAAGGAGCAGACG
ATAATTTAATATACAGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Family Protein; Acyl-CoA Thioesterase; Thioesterase Family Protein Domain Protein; Thioesterase Protein; Thiesterase

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTEINKIIHKKTFDIAWGDMDALGHVNNARYFDYFQEARIDWLRELDIKMTGQTGPVVIHVACTFLKPIVYPATVTIHSK
AHSLGNSSMIMDHDLYQEETLMAQGVSKIVWIDYTQNKSVPLPDIIRNLV

Sequences:

>Translated_130_residues
MTEINKIIHKKTFDIAWGDMDALGHVNNARYFDYFQEARIDWLRELDIKMTGQTGPVVIHVACTFLKPIVYPATVTIHSK
AHSLGNSSMIMDHDLYQEETLMAQGVSKIVWIDYTQNKSVPLPDIIRNLV
>Mature_129_residues
TEINKIIHKKTFDIAWGDMDALGHVNNARYFDYFQEARIDWLRELDIKMTGQTGPVVIHVACTFLKPIVYPATVTIHSKA
HSLGNSSMIMDHDLYQEETLMAQGVSKIVWIDYTQNKSVPLPDIIRNLV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14889; Mature: 14758

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEINKIIHKKTFDIAWGDMDALGHVNNARYFDYFQEARIDWLRELDIKMTGQTGPVVIH
CCHHHHHHHHHCCEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCEEEE
VACTFLKPIVYPATVTIHSKAHSLGNSSMIMDHDLYQEETLMAQGVSKIVWIDYTQNKSV
EHHHHHHHHHCCEEEEEECCHHCCCCCCEEECCHHHHHHHHHHCCCCEEEEEEECCCCCC
PLPDIIRNLV
CHHHHHHHCC
>Mature Secondary Structure 
TEINKIIHKKTFDIAWGDMDALGHVNNARYFDYFQEARIDWLRELDIKMTGQTGPVVIH
CHHHHHHHHHCCEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCEEEE
VACTFLKPIVYPATVTIHSKAHSLGNSSMIMDHDLYQEETLMAQGVSKIVWIDYTQNKSV
EHHHHHHHHHCCEEEEEECCHHCCCCCCEEECCHHHHHHHHHHCCCCEEEEEEECCCCCC
PLPDIIRNLV
CHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA