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The map label for this gene is recN [H]

Identifier: 148361137

GI number: 148361137

Start: 3365367

End: 3367034

Strand: Direct

Name: recN [H]

Synonym: LPC_3111

Alternate gene names: 148361137

Gene position: 3365367-3367034 (Clockwise)

Preceding gene: 148361136

Following gene: 148361138

Centisome position: 94.1

GC content: 39.57

Gene sequence:

>1668_bases
ATGCTCACGACATTGCGCATTGAACATTTTGCTATTGTTAAACAACTGGAACTCGATTTTACACAAGGCATGACCACCTT
TACAGGCGAAACAGGCGCTGGCAAATCCATCATGATTGATGCCTTGCTGTTAGCATTGGGTGAAAAAGCTGATACCTCCG
TAGTCCGCCCCGGCGAAGAAAAATGTGATATCACAGCCGGATTTTGTTTCGATGAATCATCAGAACTCGCTCAATGGTTA
GCTGAACACGATATTTCTTGTCATGATGGTGAAATCTATCTAAGGCGCATTATTTACGCAGAAGGCCGCACCAAATCTTA
TATTAATGGCCAACCTTTCCCTTTACAAAAAATAAAAGAGTTAAGTGAAAAACTGGTACACATCCATGGGCAACACCAGC
ATCAAACACTCATGCAACATGCGACACATAGCAAACAACTTGATCGCTATGCCAATAACCACTTCTTGTTAAATGAAGTC
ACTACACTCTATAAACAATATCAACAAATAGTACAAGAAATAAATGCATTACAAAGTCAGGAGCAACAAGCAGACCGCAT
TAAATTATTGCAATTTCAAATTGATGAATTACAAACACTGGGTATTCGCGAAGGTGAAGTCGAAGCCTTACATCAAGAGC
ATCAAATTTTGCATCATGCCAGAGAGTATCTGCAGTTAAGTCAACAGATCAATGAGCTATTGAATAGTGATGATCAACCG
AATATTTGCTCTGGTTTAAACCAGATTTTTCAACTCATCCAGCAACTCCCTCAGGAACAAGCGCAAATAAAAAACACAGC
TGAGTTAATTAATTCAGCCTTGATTCAATGTGAAGAAGCAATCACTGAAATGCAGCAATTCGCAGATAAAATTCAGCTGG
ATCCGGAAAGATTGCAAGAAGTGGAAGCCCGAATCAGTTCTATTCATCAACTAGCCCGGAAGTACCATCTTGATAGCAAA
TCGCTTCAGGAGCATGAAAAAACATTACAAAATGAATTGGAAAGTTTGCAAAATGTAGAAAGCAAATTGGCGCATCTTCA
TTTGCAATTGGCTCAAATCAATAAGGCATATGAAAGCGCCGCATTAAAATTAAGAGAATCACGCAAAATTCATGCAAAAA
AACTGGCTCAAGAAATAACCGCCAGCATTCAGCAGTTAGGAATGCCAAAAGGATGGATTGAAATTGAAATCACTCCTTTA
GAAAAAATGCAAGCTCATGGATTGGATAAAGTGGAATACAAGGTATGTACTAATCCTGGTATGGAGCCTGATTCATTGAA
TAAAATTGCCTCAGGCGGAGAATTATCCCGAATCAGCCTTGCAATACAGATGATTACAGCACAAAAAGGTTCAACTCCTA
CCTTATTATTTGATGAGGTCGATGTGGGTATTGGCGGTTCAACTGCTGCACTAGTTGGAAAAATGCTGAGAAAACTTGGA
GAAAGATTGCAGGTTTTTTGTGTTACCCACCAGCCACAAGTTGCTGCCTCGGCACACCATCACTTTTTAGTCACTAAACA
TAGTAACAACAATCAAACTTTTACTCATATTTCATTACTTAAAGCATCCGATAAAATTGCCGAGATCGCTCGCATGATGG
GTGGGCTCACTATAACAGAACAAACACTGTCTCATGCGAAAGAGCTGATATCGCTGAGTAATGAGTGA

Upstream 100 bases:

>100_bases
AAATGGTAATCGATTGCGTTTGTTACACCCTCTTGATTATCATTATTATGATACATTACGAAGCAAACTTGGTTGGGAAT
CAAAGCATCAGGGATAAAAC

Downstream 100 bases:

>100_bases
ACACATCGATCGTTTTCAGGTAAAATTTTAGCAATCTATTGATTTAATTTCCTATTTTTTATACAAAATATAAAATAATT
CAAAAAATTAAAAAAAAATT

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MLTTLRIEHFAIVKQLELDFTQGMTTFTGETGAGKSIMIDALLLALGEKADTSVVRPGEEKCDITAGFCFDESSELAQWL
AEHDISCHDGEIYLRRIIYAEGRTKSYINGQPFPLQKIKELSEKLVHIHGQHQHQTLMQHATHSKQLDRYANNHFLLNEV
TTLYKQYQQIVQEINALQSQEQQADRIKLLQFQIDELQTLGIREGEVEALHQEHQILHHAREYLQLSQQINELLNSDDQP
NICSGLNQIFQLIQQLPQEQAQIKNTAELINSALIQCEEAITEMQQFADKIQLDPERLQEVEARISSIHQLARKYHLDSK
SLQEHEKTLQNELESLQNVESKLAHLHLQLAQINKAYESAALKLRESRKIHAKKLAQEITASIQQLGMPKGWIEIEITPL
EKMQAHGLDKVEYKVCTNPGMEPDSLNKIASGGELSRISLAIQMITAQKGSTPTLLFDEVDVGIGGSTAALVGKMLRKLG
ERLQVFCVTHQPQVAASAHHHFLVTKHSNNNQTFTHISLLKASDKIAEIARMMGGLTITEQTLSHAKELISLSNE

Sequences:

>Translated_555_residues
MLTTLRIEHFAIVKQLELDFTQGMTTFTGETGAGKSIMIDALLLALGEKADTSVVRPGEEKCDITAGFCFDESSELAQWL
AEHDISCHDGEIYLRRIIYAEGRTKSYINGQPFPLQKIKELSEKLVHIHGQHQHQTLMQHATHSKQLDRYANNHFLLNEV
TTLYKQYQQIVQEINALQSQEQQADRIKLLQFQIDELQTLGIREGEVEALHQEHQILHHAREYLQLSQQINELLNSDDQP
NICSGLNQIFQLIQQLPQEQAQIKNTAELINSALIQCEEAITEMQQFADKIQLDPERLQEVEARISSIHQLARKYHLDSK
SLQEHEKTLQNELESLQNVESKLAHLHLQLAQINKAYESAALKLRESRKIHAKKLAQEITASIQQLGMPKGWIEIEITPL
EKMQAHGLDKVEYKVCTNPGMEPDSLNKIASGGELSRISLAIQMITAQKGSTPTLLFDEVDVGIGGSTAALVGKMLRKLG
ERLQVFCVTHQPQVAASAHHHFLVTKHSNNNQTFTHISLLKASDKIAEIARMMGGLTITEQTLSHAKELISLSNE
>Mature_555_residues
MLTTLRIEHFAIVKQLELDFTQGMTTFTGETGAGKSIMIDALLLALGEKADTSVVRPGEEKCDITAGFCFDESSELAQWL
AEHDISCHDGEIYLRRIIYAEGRTKSYINGQPFPLQKIKELSEKLVHIHGQHQHQTLMQHATHSKQLDRYANNHFLLNEV
TTLYKQYQQIVQEINALQSQEQQADRIKLLQFQIDELQTLGIREGEVEALHQEHQILHHAREYLQLSQQINELLNSDDQP
NICSGLNQIFQLIQQLPQEQAQIKNTAELINSALIQCEEAITEMQQFADKIQLDPERLQEVEARISSIHQLARKYHLDSK
SLQEHEKTLQNELESLQNVESKLAHLHLQLAQINKAYESAALKLRESRKIHAKKLAQEITASIQQLGMPKGWIEIEITPL
EKMQAHGLDKVEYKVCTNPGMEPDSLNKIASGGELSRISLAIQMITAQKGSTPTLLFDEVDVGIGGSTAALVGKMLRKLG
ERLQVFCVTHQPQVAASAHHHFLVTKHSNNNQTFTHISLLKASDKIAEIARMMGGLTITEQTLSHAKELISLSNE

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=555, Percent_Identity=41.2612612612613, Blast_Score=402, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62633; Mature: 62633

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTLRIEHFAIVKQLELDFTQGMTTFTGETGAGKSIMIDALLLALGEKADTSVVRPGEE
CCCEEEHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
KCDITAGFCFDESSELAQWLAEHDISCHDGEIYLRRIIYAEGRTKSYINGQPFPLQKIKE
CCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LSEKLVHIHGQHQHQTLMQHATHSKQLDRYANNHFLLNEVTTLYKQYQQIVQEINALQSQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQQADRIKLLQFQIDELQTLGIREGEVEALHQEHQILHHAREYLQLSQQINELLNSDDQP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NICSGLNQIFQLIQQLPQEQAQIKNTAELINSALIQCEEAITEMQQFADKIQLDPERLQE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VEARISSIHQLARKYHLDSKSLQEHEKTLQNELESLQNVESKLAHLHLQLAQINKAYESA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKLRESRKIHAKKLAQEITASIQQLGMPKGWIEIEITPLEKMQAHGLDKVEYKVCTNPG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCCCEEEEEECCCC
MEPDSLNKIASGGELSRISLAIQMITAQKGSTPTLLFDEVDVGIGGSTAALVGKMLRKLG
CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ERLQVFCVTHQPQVAASAHHHFLVTKHSNNNQTFTHISLLKASDKIAEIARMMGGLTITE
HHHEEEEECCCCCHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHH
QTLSHAKELISLSNE
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTTLRIEHFAIVKQLELDFTQGMTTFTGETGAGKSIMIDALLLALGEKADTSVVRPGEE
CCCEEEHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
KCDITAGFCFDESSELAQWLAEHDISCHDGEIYLRRIIYAEGRTKSYINGQPFPLQKIKE
CCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LSEKLVHIHGQHQHQTLMQHATHSKQLDRYANNHFLLNEVTTLYKQYQQIVQEINALQSQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQQADRIKLLQFQIDELQTLGIREGEVEALHQEHQILHHAREYLQLSQQINELLNSDDQP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NICSGLNQIFQLIQQLPQEQAQIKNTAELINSALIQCEEAITEMQQFADKIQLDPERLQE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VEARISSIHQLARKYHLDSKSLQEHEKTLQNELESLQNVESKLAHLHLQLAQINKAYESA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKLRESRKIHAKKLAQEITASIQQLGMPKGWIEIEITPLEKMQAHGLDKVEYKVCTNPG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCCCEEEEEECCCC
MEPDSLNKIASGGELSRISLAIQMITAQKGSTPTLLFDEVDVGIGGSTAALVGKMLRKLG
CCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ERLQVFCVTHQPQVAASAHHHFLVTKHSNNNQTFTHISLLKASDKIAEIARMMGGLTITE
HHHEEEEECCCCCHHHCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHH
QTLSHAKELISLSNE
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]