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The map label for this gene is 148360787

Identifier: 148360787

GI number: 148360787

Start: 689322

End: 690509

Strand: Direct

Name: 148360787

Synonym: LPC_2741

Alternate gene names: NA

Gene position: 689322-690509 (Clockwise)

Preceding gene: 148360796

Following gene: 148360785

Centisome position: 19.27

GC content: 41.5

Gene sequence:

>1188_bases
ATGGTATTCGGCTTTTTAAACTTGTCTTTCTGGGGATATGTTCTTGCAACTTTTATCCTGACTCAAATCACAATTGCATC
TGTTACTATCTATCTTCATCGGAACCAGACTCATAGAGCGCTAACATTACATCCTGTGATCAGTCATTTTTTCCGTTTTT
GGTTATGGTTAACTACGGGTATGGTTACTGCGGATTGGGTTGCTATCCACCGCAAGCACCATGCAACAACTGATGTTGAG
GGAGACCCTCATAGCCCAGTGGTTGAGGGAATCAGAAAGGTATTTTGGCAAGGCGCTGAACTTTACAGAGAGGCACGCAA
GGACAGGGATATGGTTGCCAAATATTCTCATGGCACACCAACTGATTGGATAGAGCGTAATGTCTACTCGCGCCATTCAA
GCAAAGGTATTTTGCTGATGTTATTACTGGATTTATTTTTCTTCGGGATTCCTGGAATCACAGTATGGGCAATCCAAATG
ATGTGGATTCCGCTGTTTGCTGCGGGAGTCATCAATGGCATCGGCCATTATTGGGGATACAGGAATTTTGAATGCCCTGA
TGCCGCTACTAATATCATTCCCTGGGGATTTTGGATTGGTGGAGAAGAGTTACATAATAATCATCACACTTTTGCTTCCT
CAGCCAAATTTTCAGTGAAATGGTGGGAGTTTGATATTGGTTGGATGTATATTCGCATTCTTTCCTTTTTCGGTTTGGCC
AAGGTAAAAAAATTACCTCCCAAATTGGCTATGGATGAAGGAAAATTCCATGTTGATCTGGATACTGTGAGAGCAGTTAT
TTCAAATCGCTTTCAAGTGATGTCTAATTACTATAAGAATGTCATCAGACCTATTTTGAAGTATGAAAAAAATACCAGCA
TTGAGACAAAAGAAGACAAGAAATTGTTTCAACGGGCAGGTAGATTACTGCGTCGAGAGGATAAGTTATTATCGACAAAA
GCTAAAACTCGTTTGCAAAAACTGCTCGATGCCCGCGAACAGTTGAGAGTGGTTTACTCTTACAAGCAATCATTACAAAA
TGTTTGGCTGAAAACAGCAACGACTCAAAAAGAATTAGTAGAAGCTCTGCAGCAATGGTGCCGCCAGGCAGAGGAATCGG
GTCTTGATGTGCTGAAACAGTTTGCTCAACAATTGAAAGGCTACGTACCGGTATATACTAGGGAGTGA

Upstream 100 bases:

>100_bases
TGTTATCATTACACATATATTGATTCTATAATTTAGGAATAAAATACATTCACTCTTAAATTATAGTTATTTTTATAATT
CCGTCCAATGTGGGGTTATT

Downstream 100 bases:

>100_bases
TGTTTTGCACTCCCCATCAATGCACAATGCAGCTAATATTTTAGTGGTGGCATATAAAATCATTGGGGAAAACAACAGCA
ACGCTATTGTTAGAACCATT

Product: stearoyl-CoA-9-desaturase

Products: NA

Alternate protein names: Fatty-Acid Desaturase; Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Delta-9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Delta-9 Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Transmembrane Fatty Acid Desaturase; Fatty Acid Desaturase Family; Acyl-CoA Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta 9 Acyl-Lipid Desaturase

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MVFGFLNLSFWGYVLATFILTQITIASVTIYLHRNQTHRALTLHPVISHFFRFWLWLTTGMVTADWVAIHRKHHATTDVE
GDPHSPVVEGIRKVFWQGAELYREARKDRDMVAKYSHGTPTDWIERNVYSRHSSKGILLMLLLDLFFFGIPGITVWAIQM
MWIPLFAAGVINGIGHYWGYRNFECPDAATNIIPWGFWIGGEELHNNHHTFASSAKFSVKWWEFDIGWMYIRILSFFGLA
KVKKLPPKLAMDEGKFHVDLDTVRAVISNRFQVMSNYYKNVIRPILKYEKNTSIETKEDKKLFQRAGRLLRREDKLLSTK
AKTRLQKLLDAREQLRVVYSYKQSLQNVWLKTATTQKELVEALQQWCRQAEESGLDVLKQFAQQLKGYVPVYTRE

Sequences:

>Translated_395_residues
MVFGFLNLSFWGYVLATFILTQITIASVTIYLHRNQTHRALTLHPVISHFFRFWLWLTTGMVTADWVAIHRKHHATTDVE
GDPHSPVVEGIRKVFWQGAELYREARKDRDMVAKYSHGTPTDWIERNVYSRHSSKGILLMLLLDLFFFGIPGITVWAIQM
MWIPLFAAGVINGIGHYWGYRNFECPDAATNIIPWGFWIGGEELHNNHHTFASSAKFSVKWWEFDIGWMYIRILSFFGLA
KVKKLPPKLAMDEGKFHVDLDTVRAVISNRFQVMSNYYKNVIRPILKYEKNTSIETKEDKKLFQRAGRLLRREDKLLSTK
AKTRLQKLLDAREQLRVVYSYKQSLQNVWLKTATTQKELVEALQQWCRQAEESGLDVLKQFAQQLKGYVPVYTRE
>Mature_395_residues
MVFGFLNLSFWGYVLATFILTQITIASVTIYLHRNQTHRALTLHPVISHFFRFWLWLTTGMVTADWVAIHRKHHATTDVE
GDPHSPVVEGIRKVFWQGAELYREARKDRDMVAKYSHGTPTDWIERNVYSRHSSKGILLMLLLDLFFFGIPGITVWAIQM
MWIPLFAAGVINGIGHYWGYRNFECPDAATNIIPWGFWIGGEELHNNHHTFASSAKFSVKWWEFDIGWMYIRILSFFGLA
KVKKLPPKLAMDEGKFHVDLDTVRAVISNRFQVMSNYYKNVIRPILKYEKNTSIETKEDKKLFQRAGRLLRREDKLLSTK
AKTRLQKLLDAREQLRVVYSYKQSLQNVWLKTATTQKELVEALQQWCRQAEESGLDVLKQFAQQLKGYVPVYTRE

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46208; Mature: 46208

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFGFLNLSFWGYVLATFILTQITIASVTIYLHRNQTHRALTLHPVISHFFRFWLWLTTG
CEEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHH
MVTADWVAIHRKHHATTDVEGDPHSPVVEGIRKVFWQGAELYREARKDRDMVAKYSHGTP
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
TDWIERNVYSRHSSKGILLMLLLDLFFFGIPGITVWAIQMMWIPLFAAGVINGIGHYWGY
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RNFECPDAATNIIPWGFWIGGEELHNNHHTFASSAKFSVKWWEFDIGWMYIRILSFFGLA
CCCCCCCHHCCCCCCCEEECHHHHCCCCCHHHCCCCEEEEEEEECHHHHHHHHHHHHHHH
KVKKLPPKLAMDEGKFHVDLDTVRAVISNRFQVMSNYYKNVIRPILKYEKNTSIETKEDK
HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
KLFQRAGRLLRREDKLLSTKAKTRLQKLLDAREQLRVVYSYKQSLQNVWLKTATTQKELV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EALQQWCRQAEESGLDVLKQFAQQLKGYVPVYTRE
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEECC
>Mature Secondary Structure
MVFGFLNLSFWGYVLATFILTQITIASVTIYLHRNQTHRALTLHPVISHFFRFWLWLTTG
CEEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHH
MVTADWVAIHRKHHATTDVEGDPHSPVVEGIRKVFWQGAELYREARKDRDMVAKYSHGTP
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
TDWIERNVYSRHSSKGILLMLLLDLFFFGIPGITVWAIQMMWIPLFAAGVINGIGHYWGY
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RNFECPDAATNIIPWGFWIGGEELHNNHHTFASSAKFSVKWWEFDIGWMYIRILSFFGLA
CCCCCCCHHCCCCCCCEEECHHHHCCCCCHHHCCCCEEEEEEEECHHHHHHHHHHHHHHH
KVKKLPPKLAMDEGKFHVDLDTVRAVISNRFQVMSNYYKNVIRPILKYEKNTSIETKEDK
HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
KLFQRAGRLLRREDKLLSTKAKTRLQKLLDAREQLRVVYSYKQSLQNVWLKTATTQKELV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EALQQWCRQAEESGLDVLKQFAQQLKGYVPVYTRE
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA