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The map label for this gene is comL [C]

Identifier: 148358772

GI number: 148358772

Start: 1436014

End: 1436787

Strand: Direct

Name: comL [C]

Synonym: LPC_0653

Alternate gene names: 148358772

Gene position: 1436014-1436787 (Clockwise)

Preceding gene: 148358771

Following gene: 148358776

Centisome position: 40.15

GC content: 39.41

Gene sequence:

>774_bases
ATGAAACGAATTCATGTGTTATTTCTTATTGGGTTAGTTGTTGGAATCTCATCGTGTACTAAATGGGGAAAAGATGATGA
GGATAATAACCCATATAAAGGCATGACAGCTAAGCAGCTCTACACTGCGGCACAAACCTCTTTAAAAAAAGAGGAATATG
CTACTGCTGCCAAACAGTTGGAAGCCATGGAGTCTATGTATCCTTTTAGTGACTATACTGAAAGTTCTCAAATGCAGCTT
ATTTATGCCTATTATAAAGACGAAGATTATCCTTCTGCTGCAGCAACGGCTGAGCGCTTTATTCATTTGTATCCACGCGC
AAAAAACGTTGATTATGCCTATTATATGAGAGGTTTGGCTAACTTCCAGCAAACACGAGGCGTATTTGCCAAAATGCTTC
CTATGGATGAATCCTGGAGGGACCCTGGAACACAAACTCAAGCATTGGTTGACTTTGCTACTTTAATTCAGAAATTTCCT
GACAGCAAATATAAAGCCAATGCTTTGCAACGTATGATTTATCTACGAAATATGTTTGCTCAGCACGAACTCAATGTCTC
TCTTTACTACTTCAAACGTAAAATGTATGTGGCTGCCATTGAACGGGCCAGTTATCTAGTGAAAAACTATCCTCAAGCTC
CCAGCGCTCAAAAGGCTTTAGTGGTAATGTACGAAGCCAATAAAGCATTAGGGCTTAACAAGGCAGCAGAGGATGCTATG
GCTGTTTACAAGGCTACTTATCATACTTCTAATATGATCAGAATTAATTCTTGA

Upstream 100 bases:

>100_bases
AATAGGTTGTTCGCAAATTAACTGGTCCTAGGTATAATGTCCCAAATTTTCCAGTTGCTGTACTTATAAATACAGCAGAT
ATAATTGATAGGTGTGCTTT

Downstream 100 bases:

>100_bases
TGAGTACAAAAATTTATAGAGTTTATTTTGTCAGCTGGGTTCGGCAAGTGATGTGTAATGCACTCGTTTTCTCTTGAATC
AAGATGAGAGGGAGCTCTGT

Product: competence lipoprotein ComL

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMESMYPFSDYTESSQMQL
IYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFP
DSKYKANALQRMIYLRNMFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM
AVYKATYHTSNMIRINS

Sequences:

>Translated_257_residues
MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMESMYPFSDYTESSQMQL
IYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFP
DSKYKANALQRMIYLRNMFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM
AVYKATYHTSNMIRINS
>Mature_257_residues
MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMESMYPFSDYTESSQMQL
IYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFP
DSKYKANALQRMIYLRNMFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM
AVYKATYHTSNMIRINS

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=226, Percent_Identity=34.070796460177, Blast_Score=151, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29541; Mature: 29541

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLA
HHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHH
NFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFA
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
QHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM
HHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHH
AVYKATYHTSNMIRINS
HHHHHHHCCCCEEEECC
>Mature Secondary Structure
MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLA
HHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHH
NFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFA
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
QHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM
HHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHH
AVYKATYHTSNMIRINS
HHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8097014; 10984043 [H]