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The map label for this gene is 148358771

Identifier: 148358771

GI number: 148358771

Start: 1433243

End: 1435630

Strand: Direct

Name: 148358771

Synonym: LPC_0651

Alternate gene names: NA

Gene position: 1433243-1435630 (Clockwise)

Preceding gene: 148358770

Following gene: 148358772

Centisome position: 40.07

GC content: 37.4

Gene sequence:

>2388_bases
ATGTTAACTGATGCTCAAATACAACAAGCTATTAATAATCTTAATATCCTTATTGCACACTATAACTCGCCAATATCCAG
CTTTTCTTTTGACAATGAGCGAGTTACAAGGAACTGGTTTTTCAAATCTGAATCAATACATGCTACTGCCCTGAGTAATT
ATTTAAAGAAAATTATCGATGAAGTTTCAAGCGACAAAGTAGATAAGACTAATAGTTTATATGCTAGTTTGTTTATTACC
TTACAAAATTTCCTTCATATACAACCGAACCGGGTAATTGAAGGCTTAAATTTTAATTTGGAGAATAGTCAGTGCCTGAA
ACGCAAAAACTTGATTATCAAGAGACTGGAACATTTTCATATTGAGAATCAATTCAGGGATGATCTGAAACAGCATCTTC
TTCCTGAGATTCAATATGATACGTGCACTGGGCATTATACCTCGCCAGACGATGATAAAGCGCATCAACATGGCTCAGAA
GCCCAGCGAATTTTCTTCTCTACTCAATGGGAAAGATTGAAAGCCTTATGCAATTGGTTATTGGCTAAAATGGGTATTCA
TATTTTTGAAACTGCACGTTATAAAGAACATGATTATTTGGATAGCGAGGTCTATGCCAATGATCCAGCGATTGAACTAG
GGGTAAGCCCACAACAATCAGCCACTCATTACTGGATTGGCCATGCATCAAATCTAATGACCATACCTGCTCATGATTCG
CCATTGCATGTAGTCACTGATCCTGTTGAAGGTGATTTGGCTCCTTTCCTATACCCGCGTATGACAAAGGAAGGGAGTTT
AATTGATGGAACTGGCAGTAAAAAATTACCCAAAATTGATGTAGTAGTGATTTCTCACAATCATCATGATCATGTAAGTC
AGTCCACATTGAAGCGCCTATTAAAACAGCAACCTAAGATGGTAGTTCCGGAAGGTGACGAATCATTCTTTTTAGGCATG
GGATTTACCGATGTTGTAGGGTTGAAATGGTGGGAACAAGCAAAGATTACAGATTTCCAAGGGAATGAATTATTAAGGGT
AACTGCAGTGCCTGCCAGGCATTGGTCGGGTCGATCGCTGACCGATGCCCATTGCTCAGCATTTAATGGCTATGTGCTGC
GTGCAAATCAATTAGATGGAGATATTTATTTTGCTGGGGATACCGCGTTAATGGATGACATGTTATCACAGCCCATTTTT
GAAAAATTCAATATCGTTACCTCTATTCAACCCGGTGGTCCAGATGAGCGGCGTGAAGATATGGAGTCTACTCATCAATC
TTCTGCAGATGCAATTCTGATGCATTTTAAAATATTGGCTGCACAATATCAAAAAATGAAAGAGAAGAATGAGAGTTTAT
CTCTTGATGATTTTTTAATGGAAAATCAACATCTTAAAACTCTTTATAACCATACTGCTACTTTCAAATTAGGAAATTTA
CGTCTGAAAGATACCTATTACAGTTATCAAAGAATGGTTGCTGCATTTAGGGAAGATGCTCAATGGAGAGCTGATCATTT
ACCAAAGCATGAGCAAAAGGTTTACGATCATATTCAACTTTTGATAAGCAATATGGTTTTCAAAAATAATCAACGGCTTA
GTAATCGGCAAATTGCCGATCTGATTCTGGGCAAGGTAGTTATTCCCAAAATTGGTCAAAGACAACCACTTTATTTTAAA
GAAAAATCGATAAAGACAGAAGCATTTCAATATCGTAATCTGATTACTAATCGTCGTGCTTTACTCGAGTTTGACATGTT
GCTGCAAAAATCCATTGCTGAGGCGAATGAATTCTTTAGTATCAAACGACTTATTTTAAATCTGTTGCGAGCCTATCAAA
ATCCCTGGCATGCCTTTTTTTCCCGAACGTATCTTGGAGTAGGTAATTACGAGCAAGATATCCGCAATTGCCAGAGTAAC
AGCGATTTACTCGCTGTATTAAACCATATGGAAAGAAATCTGGGCAAAAGAAATCCACATGGCCACATGCAGAGTTTGAT
TTATTATGCTAAATGGGTAATTGATTTTTCCAATAAATATCAACATGAAACCTTAATGAAATTTAAAGAATATTTTGCTT
GCCAACAGATAAGAAAATTGGCTGATCAAGAAATTCATCATGCTGGTCTTATAGTGGGTTTCGGAGATCGCCAAGCGAAG
CAACAGAGGTTTAAAATACTTTCAAATGAATTGGCTGATTTGCCTGAGGATGTTACAGAATATAGAAAAGCCATCGATAA
TTGGCTTGCCGCACGAGTTAATGATGGACAATCTACCCAACAATTGCTTAGTGAAAATCGCTCATCTGTTTTTGCAAAAA
AAGTAACCCGCGGAGAAAATACCGTGCTCCATATCAAAACAACTCTTGATATGGCAGTATCAAGTTAA

Upstream 100 bases:

>100_bases
AAATCATAAAAAATATTGAGAATTCAATGAAGCAGATATTTATAACTCTTGGCAAAATATAGCAAACGAATCAGCTGATT
GGATAATACGGTAAGAAAAT

Downstream 100 bases:

>100_bases
TAGATGCAATGACTTTAGTCTTTTTTATTAATGGGTTAGATGTCATTCACTTACTTTTTGTACTTGAAGAATAGAATAAC
GCTAAAGTGAAATTGGTTGT

Product: outer membrane protein RomA

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 795; Mature: 795

Protein sequence:

>795_residues
MLTDAQIQQAINNLNILIAHYNSPISSFSFDNERVTRNWFFKSESIHATALSNYLKKIIDEVSSDKVDKTNSLYASLFIT
LQNFLHIQPNRVIEGLNFNLENSQCLKRKNLIIKRLEHFHIENQFRDDLKQHLLPEIQYDTCTGHYTSPDDDKAHQHGSE
AQRIFFSTQWERLKALCNWLLAKMGIHIFETARYKEHDYLDSEVYANDPAIELGVSPQQSATHYWIGHASNLMTIPAHDS
PLHVVTDPVEGDLAPFLYPRMTKEGSLIDGTGSKKLPKIDVVVISHNHHDHVSQSTLKRLLKQQPKMVVPEGDESFFLGM
GFTDVVGLKWWEQAKITDFQGNELLRVTAVPARHWSGRSLTDAHCSAFNGYVLRANQLDGDIYFAGDTALMDDMLSQPIF
EKFNIVTSIQPGGPDERREDMESTHQSSADAILMHFKILAAQYQKMKEKNESLSLDDFLMENQHLKTLYNHTATFKLGNL
RLKDTYYSYQRMVAAFREDAQWRADHLPKHEQKVYDHIQLLISNMVFKNNQRLSNRQIADLILGKVVIPKIGQRQPLYFK
EKSIKTEAFQYRNLITNRRALLEFDMLLQKSIAEANEFFSIKRLILNLLRAYQNPWHAFFSRTYLGVGNYEQDIRNCQSN
SDLLAVLNHMERNLGKRNPHGHMQSLIYYAKWVIDFSNKYQHETLMKFKEYFACQQIRKLADQEIHHAGLIVGFGDRQAK
QQRFKILSNELADLPEDVTEYRKAIDNWLAARVNDGQSTQQLLSENRSSVFAKKVTRGENTVLHIKTTLDMAVSS

Sequences:

>Translated_795_residues
MLTDAQIQQAINNLNILIAHYNSPISSFSFDNERVTRNWFFKSESIHATALSNYLKKIIDEVSSDKVDKTNSLYASLFIT
LQNFLHIQPNRVIEGLNFNLENSQCLKRKNLIIKRLEHFHIENQFRDDLKQHLLPEIQYDTCTGHYTSPDDDKAHQHGSE
AQRIFFSTQWERLKALCNWLLAKMGIHIFETARYKEHDYLDSEVYANDPAIELGVSPQQSATHYWIGHASNLMTIPAHDS
PLHVVTDPVEGDLAPFLYPRMTKEGSLIDGTGSKKLPKIDVVVISHNHHDHVSQSTLKRLLKQQPKMVVPEGDESFFLGM
GFTDVVGLKWWEQAKITDFQGNELLRVTAVPARHWSGRSLTDAHCSAFNGYVLRANQLDGDIYFAGDTALMDDMLSQPIF
EKFNIVTSIQPGGPDERREDMESTHQSSADAILMHFKILAAQYQKMKEKNESLSLDDFLMENQHLKTLYNHTATFKLGNL
RLKDTYYSYQRMVAAFREDAQWRADHLPKHEQKVYDHIQLLISNMVFKNNQRLSNRQIADLILGKVVIPKIGQRQPLYFK
EKSIKTEAFQYRNLITNRRALLEFDMLLQKSIAEANEFFSIKRLILNLLRAYQNPWHAFFSRTYLGVGNYEQDIRNCQSN
SDLLAVLNHMERNLGKRNPHGHMQSLIYYAKWVIDFSNKYQHETLMKFKEYFACQQIRKLADQEIHHAGLIVGFGDRQAK
QQRFKILSNELADLPEDVTEYRKAIDNWLAARVNDGQSTQQLLSENRSSVFAKKVTRGENTVLHIKTTLDMAVSS
>Mature_795_residues
MLTDAQIQQAINNLNILIAHYNSPISSFSFDNERVTRNWFFKSESIHATALSNYLKKIIDEVSSDKVDKTNSLYASLFIT
LQNFLHIQPNRVIEGLNFNLENSQCLKRKNLIIKRLEHFHIENQFRDDLKQHLLPEIQYDTCTGHYTSPDDDKAHQHGSE
AQRIFFSTQWERLKALCNWLLAKMGIHIFETARYKEHDYLDSEVYANDPAIELGVSPQQSATHYWIGHASNLMTIPAHDS
PLHVVTDPVEGDLAPFLYPRMTKEGSLIDGTGSKKLPKIDVVVISHNHHDHVSQSTLKRLLKQQPKMVVPEGDESFFLGM
GFTDVVGLKWWEQAKITDFQGNELLRVTAVPARHWSGRSLTDAHCSAFNGYVLRANQLDGDIYFAGDTALMDDMLSQPIF
EKFNIVTSIQPGGPDERREDMESTHQSSADAILMHFKILAAQYQKMKEKNESLSLDDFLMENQHLKTLYNHTATFKLGNL
RLKDTYYSYQRMVAAFREDAQWRADHLPKHEQKVYDHIQLLISNMVFKNNQRLSNRQIADLILGKVVIPKIGQRQPLYFK
EKSIKTEAFQYRNLITNRRALLEFDMLLQKSIAEANEFFSIKRLILNLLRAYQNPWHAFFSRTYLGVGNYEQDIRNCQSN
SDLLAVLNHMERNLGKRNPHGHMQSLIYYAKWVIDFSNKYQHETLMKFKEYFACQQIRKLADQEIHHAGLIVGFGDRQAK
QQRFKILSNELADLPEDVTEYRKAIDNWLAARVNDGQSTQQLLSENRSSVFAKKVTRGENTVLHIKTTLDMAVSS

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17543102, Length=231, Percent_Identity=28.1385281385281, Blast_Score=74, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17543100, Length=229, Percent_Identity=28.3842794759825, Blast_Score=74, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI25148824, Length=235, Percent_Identity=28.0851063829787, Blast_Score=73, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17543104, Length=223, Percent_Identity=28.2511210762332, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6325154, Length=202, Percent_Identity=30.1980198019802, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91926; Mature: 91926

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDAQIQQAINNLNILIAHYNSPISSFSFDNERVTRNWFFKSESIHATALSNYLKKIID
CCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHEECCCCCHHHHHHHHHHHHHH
EVSSDKVDKTNSLYASLFITLQNFLHIQPNRVIEGLNFNLENSQCLKRKNLIIKRLEHFH
HHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IENQFRDDLKQHLLPEIQYDTCTGHYTSPDDDKAHQHGSEAQRIFFSTQWERLKALCNWL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LAKMGIHIFETARYKEHDYLDSEVYANDPAIELGVSPQQSATHYWIGHASNLMTIPAHDS
HHHHCHHHHHHHCCCCCCCCCCHHCCCCCCEEECCCCCCCCCEEEEECCCCEEEECCCCC
PLHVVTDPVEGDLAPFLYPRMTKEGSLIDGTGSKKLPKIDVVVISHNHHDHVSQSTLKRL
CCEEEECCCCCCCCHHHCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
LKQQPKMVVPEGDESFFLGMGFTDVVGLKWWEQAKITDFQGNELLRVTAVPARHWSGRSL
HHHCCCEEECCCCCCEEEECCHHHHHCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCC
TDAHCSAFNGYVLRANQLDGDIYFAGDTALMDDMLSQPIFEKFNIVTSIQPGGPDERRED
CHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHCCHHHHHHCEEEEECCCCCCHHHHH
MESTHQSSADAILMHFKILAAQYQKMKEKNESLSLDDFLMENQHLKTLYNHTATFKLGNL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCEEEECCE
RLKDTYYSYQRMVAAFREDAQWRADHLPKHEQKVYDHIQLLISNMVFKNNQRLSNRQIAD
EEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LILGKVVIPKIGQRQPLYFKEKSIKTEAFQYRNLITNRRALLEFDMLLQKSIAEANEFFS
HHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKRLILNLLRAYQNPWHAFFSRTYLGVGNYEQDIRNCQSNSDLLAVLNHMERNLGKRNPH
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
GHMQSLIYYAKWVIDFSNKYQHETLMKFKEYFACQQIRKLADQEIHHAGLIVGFGDRQAK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHH
QQRFKILSNELADLPEDVTEYRKAIDNWLAARVNDGQSTQQLLSENRSSVFAKKVTRGEN
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCC
TVLHIKTTLDMAVSS
EEEEEEEEEHHHHCC
>Mature Secondary Structure
MLTDAQIQQAINNLNILIAHYNSPISSFSFDNERVTRNWFFKSESIHATALSNYLKKIID
CCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHEECCCCCHHHHHHHHHHHHHH
EVSSDKVDKTNSLYASLFITLQNFLHIQPNRVIEGLNFNLENSQCLKRKNLIIKRLEHFH
HHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IENQFRDDLKQHLLPEIQYDTCTGHYTSPDDDKAHQHGSEAQRIFFSTQWERLKALCNWL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LAKMGIHIFETARYKEHDYLDSEVYANDPAIELGVSPQQSATHYWIGHASNLMTIPAHDS
HHHHCHHHHHHHCCCCCCCCCCHHCCCCCCEEECCCCCCCCCEEEEECCCCEEEECCCCC
PLHVVTDPVEGDLAPFLYPRMTKEGSLIDGTGSKKLPKIDVVVISHNHHDHVSQSTLKRL
CCEEEECCCCCCCCHHHCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
LKQQPKMVVPEGDESFFLGMGFTDVVGLKWWEQAKITDFQGNELLRVTAVPARHWSGRSL
HHHCCCEEECCCCCCEEEECCHHHHHCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCC
TDAHCSAFNGYVLRANQLDGDIYFAGDTALMDDMLSQPIFEKFNIVTSIQPGGPDERRED
CHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHCCHHHHHHCEEEEECCCCCCHHHHH
MESTHQSSADAILMHFKILAAQYQKMKEKNESLSLDDFLMENQHLKTLYNHTATFKLGNL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCEEEECCE
RLKDTYYSYQRMVAAFREDAQWRADHLPKHEQKVYDHIQLLISNMVFKNNQRLSNRQIAD
EEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LILGKVVIPKIGQRQPLYFKEKSIKTEAFQYRNLITNRRALLEFDMLLQKSIAEANEFFS
HHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKRLILNLLRAYQNPWHAFFSRTYLGVGNYEQDIRNCQSNSDLLAVLNHMERNLGKRNPH
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
GHMQSLIYYAKWVIDFSNKYQHETLMKFKEYFACQQIRKLADQEIHHAGLIVGFGDRQAK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHH
QQRFKILSNELADLPEDVTEYRKAIDNWLAARVNDGQSTQQLLSENRSSVFAKKVTRGEN
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCCC
TVLHIKTTLDMAVSS
EEEEEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA