| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284804
Identifier: 148284804
GI number: 148284804
Start: 1454148
End: 1455626
Strand: Direct
Name: 148284804
Synonym: OTBS_1492
Alternate gene names: NA
Gene position: 1454148-1455626 (Clockwise)
Preceding gene: 148284803
Following gene: 148284805
Centisome position: 68.36
GC content: 31.03
Gene sequence:
>1479_bases ATGAAAAAGAAAATAACTATTGTTATTATAGTATTAGTAGCTTTAATAACTGTTAATTTTGCTGCTGATGGATGCGGAGA AAAGTCTATGGTATTATCTAATTTTGAATTAGCAGCAAGTAGGCTAGGATTTAATGGTTACAAAACGTCAAACTTAACAG TAAGTGCAACAGAACATCAAGAAGCTCTGTTGAATGTACTACAAATAGCTGGTTATTTTCATTCAGAACAATTGTGGCAA GCTATTAATGCTTTGAAAGTCAAAGATCCTGTGGCAACTTTTAAGCAGATATATTCTGTTGTAAAAGCGTCTGGAGCTAA TCAAGATGATCCTAGTAAGTTTGACACTAAAATATTACGTAAAAATTTCGGAGAAGGCACAGAGTTAAGTATACAAGATA TTATGGATTTAATTCTTTATTTATCTCAAAATGCTTTTAATAGGACATTTGGTCAAGAACGTAGTGAAGTAGTTGCTCAG AATTGGATGGCAAAGTATAAAGATGAGTATTTGAAAGAAGCCGAAATTTTACAACTCATAGACCGCGAAATTCCAAAATA TAAGCATTATGATGTAGCTTGGATTGCTGGTGCATCTCGCTTCAATATGATAACACGTATCATAGACTACTACTATGCAA TATCAAAGTATAATATTAAAATCAATAGTAATGTAGCAGTATTAACAGGGAATCGCGAATTATGGGCTAATATTGATGGG GTTGTGCCTACAGTTTTGGAGAAACTAATACATGCTTATCAAACAAACTTAAATTTTGATCTGTTAGACATAGATAATTC AGACATAAAACGTGTTGATGAAGGCAAAGAATATATTCTCAGGTTAGCTAAAAAATATCACATAAAGTTAAATTCATTAT CTCCTTTTATTCAATATACTAATTTAAGTGAATGTCCTACTGGGTGTTTTCCCAATAGGCTATATCCAGATTATATAGAG AGTGGAGGCATAAAACTAAATGAAGCTTTGATGGTGCGTGATTTAATAGATACTATTTTTAGTTCTAAAGTTATTACTAT AGTTGATGAAACGGTTGGTGTAGATTCATATAGATCTACTACAGAAAGTACTGTACATGATGCAACAATAGAATTCCTTG AGGATGTTATTAATACAAATGAATATGTGAATAAAAAAGAATTTATTATCTTATTTCAGAGCAATAATCCGTTTATTTTA CGTCAAACTATTGTTACACAAAGACAAGTTAATGAGGTAGTAGATTATTATAATAAGTTGTACGGTAAAGATTATTCAAT ACAAGTTGATGGCATAGGCTATAAGTGTAAAGCAGATGTATCGATAATTCATTCTGAGTTTGCAGCATTAGTACTAGAAA AATGGAAGGATGCAACTAATAAAAATAAAAACTTGGCCTCAAAACGATCTATCAATGATTTGCAATTTCAGAATCGAGAC CATTCCGAAACAATTTTACCTATGCTTGCTATTTCTTAA
Upstream 100 bases:
>100_bases ATCACAGAATTATTGATGGTAAGGAGGCAGTGACATTTTTAACTAAAGTAAAAAGCTATATAGAATCACCAGAAAGGCTA TTGCTTAATATTTAATTTTT
Downstream 100 bases:
>100_bases TAACCAAGTTATTAGCTGTTAACATGACATCTTATGTAGTATATACAAAATAAGAAGTGGGTGTGTTAATACTTGACAAT CTGACATATTCTGCCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MKKKITIVIIVLVALITVNFAADGCGEKSMVLSNFELAASRLGFNGYKTSNLTVSATEHQEALLNVLQIAGYFHSEQLWQ AINALKVKDPVATFKQIYSVVKASGANQDDPSKFDTKILRKNFGEGTELSIQDIMDLILYLSQNAFNRTFGQERSEVVAQ NWMAKYKDEYLKEAEILQLIDREIPKYKHYDVAWIAGASRFNMITRIIDYYYAISKYNIKINSNVAVLTGNRELWANIDG VVPTVLEKLIHAYQTNLNFDLLDIDNSDIKRVDEGKEYILRLAKKYHIKLNSLSPFIQYTNLSECPTGCFPNRLYPDYIE SGGIKLNEALMVRDLIDTIFSSKVITIVDETVGVDSYRSTTESTVHDATIEFLEDVINTNEYVNKKEFIILFQSNNPFIL RQTIVTQRQVNEVVDYYNKLYGKDYSIQVDGIGYKCKADVSIIHSEFAALVLEKWKDATNKNKNLASKRSINDLQFQNRD HSETILPMLAIS
Sequences:
>Translated_492_residues MKKKITIVIIVLVALITVNFAADGCGEKSMVLSNFELAASRLGFNGYKTSNLTVSATEHQEALLNVLQIAGYFHSEQLWQ AINALKVKDPVATFKQIYSVVKASGANQDDPSKFDTKILRKNFGEGTELSIQDIMDLILYLSQNAFNRTFGQERSEVVAQ NWMAKYKDEYLKEAEILQLIDREIPKYKHYDVAWIAGASRFNMITRIIDYYYAISKYNIKINSNVAVLTGNRELWANIDG VVPTVLEKLIHAYQTNLNFDLLDIDNSDIKRVDEGKEYILRLAKKYHIKLNSLSPFIQYTNLSECPTGCFPNRLYPDYIE SGGIKLNEALMVRDLIDTIFSSKVITIVDETVGVDSYRSTTESTVHDATIEFLEDVINTNEYVNKKEFIILFQSNNPFIL RQTIVTQRQVNEVVDYYNKLYGKDYSIQVDGIGYKCKADVSIIHSEFAALVLEKWKDATNKNKNLASKRSINDLQFQNRD HSETILPMLAIS >Mature_492_residues MKKKITIVIIVLVALITVNFAADGCGEKSMVLSNFELAASRLGFNGYKTSNLTVSATEHQEALLNVLQIAGYFHSEQLWQ AINALKVKDPVATFKQIYSVVKASGANQDDPSKFDTKILRKNFGEGTELSIQDIMDLILYLSQNAFNRTFGQERSEVVAQ NWMAKYKDEYLKEAEILQLIDREIPKYKHYDVAWIAGASRFNMITRIIDYYYAISKYNIKINSNVAVLTGNRELWANIDG VVPTVLEKLIHAYQTNLNFDLLDIDNSDIKRVDEGKEYILRLAKKYHIKLNSLSPFIQYTNLSECPTGCFPNRLYPDYIE SGGIKLNEALMVRDLIDTIFSSKVITIVDETVGVDSYRSTTESTVHDATIEFLEDVINTNEYVNKKEFIILFQSNNPFIL RQTIVTQRQVNEVVDYYNKLYGKDYSIQVDGIGYKCKADVSIIHSEFAALVLEKWKDATNKNKNLASKRSINDLQFQNRD HSETILPMLAIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56093; Mature: 56093
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKITIVIIVLVALITVNFAADGCGEKSMVLSNFELAASRLGFNGYKTSNLTVSATEHQ CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCEECCCEEEEECHHH EALLNVLQIAGYFHSEQLWQAINALKVKDPVATFKQIYSVVKASGANQDDPSKFDTKILR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KNFGEGTELSIQDIMDLILYLSQNAFNRTFGQERSEVVAQNWMAKYKDEYLKEAEILQLI HCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DREIPKYKHYDVAWIAGASRFNMITRIIDYYYAISKYNIKINSNVAVLTGNRELWANIDG HHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCCEECCCCC VVPTVLEKLIHAYQTNLNFDLLDIDNSDIKRVDEGKEYILRLAKKYHIKLNSLSPFIQYT HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHEEC NLSECPTGCFPNRLYPDYIESGGIKLNEALMVRDLIDTIFSSKVITIVDETVGVDSYRST CCCCCCCCCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCHHCC TESTVHDATIEFLEDVINTNEYVNKKEFIILFQSNNPFILRQTIVTQRQVNEVVDYYNKL HHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHH YGKDYSIQVDGIGYKCKADVSIIHSEFAALVLEKWKDATNKNKNLASKRSINDLQFQNRD HCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCC HSETILPMLAIS CCHHHHHHEECC >Mature Secondary Structure MKKKITIVIIVLVALITVNFAADGCGEKSMVLSNFELAASRLGFNGYKTSNLTVSATEHQ CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCEECCCEEEEECHHH EALLNVLQIAGYFHSEQLWQAINALKVKDPVATFKQIYSVVKASGANQDDPSKFDTKILR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH KNFGEGTELSIQDIMDLILYLSQNAFNRTFGQERSEVVAQNWMAKYKDEYLKEAEILQLI HCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DREIPKYKHYDVAWIAGASRFNMITRIIDYYYAISKYNIKINSNVAVLTGNRELWANIDG HHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCCEECCCCC VVPTVLEKLIHAYQTNLNFDLLDIDNSDIKRVDEGKEYILRLAKKYHIKLNSLSPFIQYT HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHEEC NLSECPTGCFPNRLYPDYIESGGIKLNEALMVRDLIDTIFSSKVITIVDETVGVDSYRST CCCCCCCCCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCHHCC TESTVHDATIEFLEDVINTNEYVNKKEFIILFQSNNPFILRQTIVTQRQVNEVVDYYNKL HHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHH YGKDYSIQVDGIGYKCKADVSIIHSEFAALVLEKWKDATNKNKNLASKRSINDLQFQNRD HCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCCC HSETILPMLAIS CCHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA