Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

Click here to switch to the map view.

The map label for this gene is 148284679

Identifier: 148284679

GI number: 148284679

Start: 1195181

End: 1197637

Strand: Direct

Name: 148284679

Synonym: OTBS_1226

Alternate gene names: NA

Gene position: 1195181-1197637 (Clockwise)

Preceding gene: 148284678

Following gene: 148284680

Centisome position: 56.19

GC content: 26.9

Gene sequence:

>2457_bases
ATGAAAGCAAAGAAAAAAAAGCATAATAAAGTTGTTAATCTTAAAAATAAAACTGAAAAAACAGCAAATAACAGTGCTGC
TGAACAGCAAATAATGGAAATAAATGCTGCATTTTCCGATAAAATTAAGAAATCTCTATATAAAGGTGCTGTATTAGAAT
CAATCTTCGCTTGCGCATTAAAAACTGAAGATATCGAAACTTTAAAAATTATAGAATCGCAAAATATTAAAATAAATACA
GAATGTATTACTGAATTATTTGTGGGCTTTATTACAGAATTCAGTAAGTATAAATTTGCTATACAATGGCTACAAGAACA
ATTTTCATCAATAATAGATGATTTAGTTACTGAAACCCCAAAAATTATAAAGTGTATGATAATAGATAGTTGCGAAAATA
GAGATGATGAACTCATTTCCTTCATTATAAAAAATTACAGTAACAAAATAGATATTGATGAGGCTTTTGATAGCCTTGTT
ACATTAAATTTTGGACGTGGTATAACTCTGTTATTAAATAACTGTAAAGTAACACAAGAGTCTATACAAAAAGCTATAAA
AACAGCTCAAACATTAGGCAATATTGCAGCTGAAAAGATATTAAATCCTAATATTAAACTAAAAAAACCACCACGCAAAA
AAAAAAGTGAAATACAATATTCTAATTTCAAAGAAGCTGAAATAAAAGATAAATTCAAACATTGTACTTCTTGCCCTAAT
GATTACGAGATATTTTTAACTAAATTTTTTAAGATTGTTCACTCTTGTAATAAAAATGATATTAATAAATTCATTAGCGA
TTGCGAAATATGCCTACAATCCAGTAATGAGGATAATGAAAAAAATTATGTTATAGATTTCCTTATACAGGTTCAAAATT
ATTTTATATTACCTGCTCACAAAACAGAAAGCCTTACTAAAGTTATATTGCCTTATTTTGAAGCAAAAGAAGATTGGTAT
AACATTGCAGTATTCCATATAAACAGATGCATTGAGAACAAGATATTTCATTTCGAAAAAGCTATTGATGCTGTTTTTAA
AATTAACAAAACCTCTGAAAGAGATAAGTATGCTTTTGTATCAACGGTATTGAAATATAATATACTAAATGATGCAGTAA
ATTGGGCTAGATATTTAAAATTTTCAGATAAACTACAAAAATTTTCTACAGGTGTATATAATACACTGAATACAGCTATT
TTATATAAAAAAATTTCAACTTTTATATTGAAAGGTGATAAAAACAATGCTGAAAAATATATAGAAAAATTACACGAATC
GCTCCCAAAAGAAATTATACACTTAGAATACAGATTGAAATTTGATAGTAATTTTGATTACAGTAATGAAGTACAACGTG
TATATAATATAAAGGCTAAAATTGACCAACAAAAATTAATGATTGCAGGTAGAATTTTATCAGAACCATTTCTAAGGGTT
CTGATAAAATTTTGGCAACATTTTGATACCTGTAATAATGATCAGCAATGTAATAACATTCAACAAATTTACGATGATTT
AGCAAAATATCGCTCATTATCAAGTGCGCAAGATGATATAATAAATCTTCTTAATAACTCTTCTATAAAAAACAAACCTG
CATCAGATGTGATAGTTACAAATGATCTTAAAAAAGATGACATAGCTGATAAACGTAAAAATAATCAAGGCGTATCACTG
AAAAAAGAATCATTAAATGACTATGCTACTACATCTTCTCATAAGAAGAATCAAGTAACTACCAAAAATGAGTTGGAGCA
AAATGTAGAGACAAAATCAGGAGATGCAGTAGATTTTTTAGATAATGTGAACACAGATGAAGTAAGTGAAGTAGATGAAA
ATATAGATAATTCATGTGTAAATAATACTGTATTTGATGAACAGTATACACCAGATGAGTTTTATACAAAATTAATGCAA
GTATATACAAATCACAATACTTTGTTTACAAATCATGATAAGCATCAGCACATTCATTGCCATACTAAAAAACATACTTA
TTGTACCTTTGATCCAGATGTAAAGAAGTGTACATGGAATGGAAAGACATATTATTGCGCTATCTCTAAAGACCTCAAAT
TAGATTCTGTAAAACAGATGTATTATCGTAATGCTTTAGAAAAAGAATTTGTTTCATCGAATATCAACCAATCTGGTATA
AAATGCTTGCCTAATAAGATGTTTGAATTAAAGGTTTGCAAAGAAGATTTTAGATTATTAGCTTGTAATACATACGTAGA
CAATAAAGGAAATTATTTTATTATTTTTAATAAAGAAACTAATCATACAGGAATATCAAATATTATTAGTAACTCAACTC
TTAGCAATAATCCAATTTTGACAGAATCATGTAAAGACTGTAATGACGAAGCTGATAGTACTACAGTAAATACTGATATT
ACCCCATGTGTAATAGGACAAATGCTTAATCAAACTGAATATTATAATGATTGTTAA

Upstream 100 bases:

>100_bases
TTCATTAAAAGCATATTGATATAAATTCATATTTTGTCTTGAAAGATTAATATAAATTAAGTATTATGCGATATTATACA
TTTAATAAGGAAATAAGCTT

Downstream 100 bases:

>100_bases
TCATGCAACAAAAAAGTACACAAAATTAAATTTATTGTAACAAGTTTTCCAAGAGTTGGGAGATTTATATTAACTATAGT
TCGATATAAGAGCTACATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 818; Mature: 818

Protein sequence:

>818_residues
MKAKKKKHNKVVNLKNKTEKTANNSAAEQQIMEINAAFSDKIKKSLYKGAVLESIFACALKTEDIETLKIIESQNIKINT
ECITELFVGFITEFSKYKFAIQWLQEQFSSIIDDLVTETPKIIKCMIIDSCENRDDELISFIIKNYSNKIDIDEAFDSLV
TLNFGRGITLLLNNCKVTQESIQKAIKTAQTLGNIAAEKILNPNIKLKKPPRKKKSEIQYSNFKEAEIKDKFKHCTSCPN
DYEIFLTKFFKIVHSCNKNDINKFISDCEICLQSSNEDNEKNYVIDFLIQVQNYFILPAHKTESLTKVILPYFEAKEDWY
NIAVFHINRCIENKIFHFEKAIDAVFKINKTSERDKYAFVSTVLKYNILNDAVNWARYLKFSDKLQKFSTGVYNTLNTAI
LYKKISTFILKGDKNNAEKYIEKLHESLPKEIIHLEYRLKFDSNFDYSNEVQRVYNIKAKIDQQKLMIAGRILSEPFLRV
LIKFWQHFDTCNNDQQCNNIQQIYDDLAKYRSLSSAQDDIINLLNNSSIKNKPASDVIVTNDLKKDDIADKRKNNQGVSL
KKESLNDYATTSSHKKNQVTTKNELEQNVETKSGDAVDFLDNVNTDEVSEVDENIDNSCVNNTVFDEQYTPDEFYTKLMQ
VYTNHNTLFTNHDKHQHIHCHTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGI
KCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNNPILTESCKDCNDEADSTTVNTDI
TPCVIGQMLNQTEYYNDC

Sequences:

>Translated_818_residues
MKAKKKKHNKVVNLKNKTEKTANNSAAEQQIMEINAAFSDKIKKSLYKGAVLESIFACALKTEDIETLKIIESQNIKINT
ECITELFVGFITEFSKYKFAIQWLQEQFSSIIDDLVTETPKIIKCMIIDSCENRDDELISFIIKNYSNKIDIDEAFDSLV
TLNFGRGITLLLNNCKVTQESIQKAIKTAQTLGNIAAEKILNPNIKLKKPPRKKKSEIQYSNFKEAEIKDKFKHCTSCPN
DYEIFLTKFFKIVHSCNKNDINKFISDCEICLQSSNEDNEKNYVIDFLIQVQNYFILPAHKTESLTKVILPYFEAKEDWY
NIAVFHINRCIENKIFHFEKAIDAVFKINKTSERDKYAFVSTVLKYNILNDAVNWARYLKFSDKLQKFSTGVYNTLNTAI
LYKKISTFILKGDKNNAEKYIEKLHESLPKEIIHLEYRLKFDSNFDYSNEVQRVYNIKAKIDQQKLMIAGRILSEPFLRV
LIKFWQHFDTCNNDQQCNNIQQIYDDLAKYRSLSSAQDDIINLLNNSSIKNKPASDVIVTNDLKKDDIADKRKNNQGVSL
KKESLNDYATTSSHKKNQVTTKNELEQNVETKSGDAVDFLDNVNTDEVSEVDENIDNSCVNNTVFDEQYTPDEFYTKLMQ
VYTNHNTLFTNHDKHQHIHCHTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGI
KCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNNPILTESCKDCNDEADSTTVNTDI
TPCVIGQMLNQTEYYNDC
>Mature_818_residues
MKAKKKKHNKVVNLKNKTEKTANNSAAEQQIMEINAAFSDKIKKSLYKGAVLESIFACALKTEDIETLKIIESQNIKINT
ECITELFVGFITEFSKYKFAIQWLQEQFSSIIDDLVTETPKIIKCMIIDSCENRDDELISFIIKNYSNKIDIDEAFDSLV
TLNFGRGITLLLNNCKVTQESIQKAIKTAQTLGNIAAEKILNPNIKLKKPPRKKKSEIQYSNFKEAEIKDKFKHCTSCPN
DYEIFLTKFFKIVHSCNKNDINKFISDCEICLQSSNEDNEKNYVIDFLIQVQNYFILPAHKTESLTKVILPYFEAKEDWY
NIAVFHINRCIENKIFHFEKAIDAVFKINKTSERDKYAFVSTVLKYNILNDAVNWARYLKFSDKLQKFSTGVYNTLNTAI
LYKKISTFILKGDKNNAEKYIEKLHESLPKEIIHLEYRLKFDSNFDYSNEVQRVYNIKAKIDQQKLMIAGRILSEPFLRV
LIKFWQHFDTCNNDQQCNNIQQIYDDLAKYRSLSSAQDDIINLLNNSSIKNKPASDVIVTNDLKKDDIADKRKNNQGVSL
KKESLNDYATTSSHKKNQVTTKNELEQNVETKSGDAVDFLDNVNTDEVSEVDENIDNSCVNNTVFDEQYTPDEFYTKLMQ
VYTNHNTLFTNHDKHQHIHCHTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGI
KCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNNPILTESCKDCNDEADSTTVNTDI
TPCVIGQMLNQTEYYNDC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94664; Mature: 94664

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKKKKHNKVVNLKNKTEKTANNSAAEQQIMEINAAFSDKIKKSLYKGAVLESIFACAL
CCCCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTEDIETLKIIESQNIKINTECITELFVGFITEFSKYKFAIQWLQEQFSSIIDDLVTETP
CCCCCHHHEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIIKCMIIDSCENRDDELISFIIKNYSNKIDIDEAFDSLVTLNFGRGITLLLNNCKVTQE
HHEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCEEEEEECCCCCHH
SIQKAIKTAQTLGNIAAEKILNPNIKLKKPPRKKKSEIQYSNFKEAEIKDKFKHCTSCPN
HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
DYEIFLTKFFKIVHSCNKNDINKFISDCEICLQSSNEDNEKNYVIDFLIQVQNYFILPAH
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCEEEEECC
KTESLTKVILPYFEAKEDWYNIAVFHINRCIENKIFHFEKAIDAVFKINKTSERDKYAFV
CHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
STVLKYNILNDAVNWARYLKFSDKLQKFSTGVYNTLNTAILYKKISTFILKGDKNNAEKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
IEKLHESLPKEIIHLEYRLKFDSNFDYSNEVQRVYNIKAKIDQQKLMIAGRILSEPFLRV
HHHHHHHCCHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LIKFWQHFDTCNNDQQCNNIQQIYDDLAKYRSLSSAQDDIINLLNNSSIKNKPASDVIVT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEE
NDLKKDDIADKRKNNQGVSLKKESLNDYATTSSHKKNQVTTKNELEQNVETKSGDAVDFL
CCCCCCHHHHHHCCCCCCEEEHHHCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
DNVNTDEVSEVDENIDNSCVNNTVFDEQYTPDEFYTKLMQVYTNHNTLFTNHDKHQHIHC
HCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEE
HTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGI
ECCCCEEEECCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
KCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNNPIL
HHHCCHHHHHHEEHHCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCC
TESCKDCNDEADSTTVNTDITPCVIGQMLNQTEYYNDC
CCHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKAKKKKHNKVVNLKNKTEKTANNSAAEQQIMEINAAFSDKIKKSLYKGAVLESIFACAL
CCCCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTEDIETLKIIESQNIKINTECITELFVGFITEFSKYKFAIQWLQEQFSSIIDDLVTETP
CCCCCHHHEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIIKCMIIDSCENRDDELISFIIKNYSNKIDIDEAFDSLVTLNFGRGITLLLNNCKVTQE
HHEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCEEEEEECCCCCHH
SIQKAIKTAQTLGNIAAEKILNPNIKLKKPPRKKKSEIQYSNFKEAEIKDKFKHCTSCPN
HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC
DYEIFLTKFFKIVHSCNKNDINKFISDCEICLQSSNEDNEKNYVIDFLIQVQNYFILPAH
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCEEEEECC
KTESLTKVILPYFEAKEDWYNIAVFHINRCIENKIFHFEKAIDAVFKINKTSERDKYAFV
CHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
STVLKYNILNDAVNWARYLKFSDKLQKFSTGVYNTLNTAILYKKISTFILKGDKNNAEKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
IEKLHESLPKEIIHLEYRLKFDSNFDYSNEVQRVYNIKAKIDQQKLMIAGRILSEPFLRV
HHHHHHHCCHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LIKFWQHFDTCNNDQQCNNIQQIYDDLAKYRSLSSAQDDIINLLNNSSIKNKPASDVIVT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEE
NDLKKDDIADKRKNNQGVSLKKESLNDYATTSSHKKNQVTTKNELEQNVETKSGDAVDFL
CCCCCCHHHHHHCCCCCCEEEHHHCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
DNVNTDEVSEVDENIDNSCVNNTVFDEQYTPDEFYTKLMQVYTNHNTLFTNHDKHQHIHC
HCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEE
HTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGI
ECCCCEEEECCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
KCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNNPIL
HHHCCHHHHHHEEHHCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCC
TESCKDCNDEADSTTVNTDITPCVIGQMLNQTEYYNDC
CCHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA