| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284679
Identifier: 148284679
GI number: 148284679
Start: 1195181
End: 1197637
Strand: Direct
Name: 148284679
Synonym: OTBS_1226
Alternate gene names: NA
Gene position: 1195181-1197637 (Clockwise)
Preceding gene: 148284678
Following gene: 148284680
Centisome position: 56.19
GC content: 26.9
Gene sequence:
>2457_bases ATGAAAGCAAAGAAAAAAAAGCATAATAAAGTTGTTAATCTTAAAAATAAAACTGAAAAAACAGCAAATAACAGTGCTGC TGAACAGCAAATAATGGAAATAAATGCTGCATTTTCCGATAAAATTAAGAAATCTCTATATAAAGGTGCTGTATTAGAAT CAATCTTCGCTTGCGCATTAAAAACTGAAGATATCGAAACTTTAAAAATTATAGAATCGCAAAATATTAAAATAAATACA GAATGTATTACTGAATTATTTGTGGGCTTTATTACAGAATTCAGTAAGTATAAATTTGCTATACAATGGCTACAAGAACA ATTTTCATCAATAATAGATGATTTAGTTACTGAAACCCCAAAAATTATAAAGTGTATGATAATAGATAGTTGCGAAAATA GAGATGATGAACTCATTTCCTTCATTATAAAAAATTACAGTAACAAAATAGATATTGATGAGGCTTTTGATAGCCTTGTT ACATTAAATTTTGGACGTGGTATAACTCTGTTATTAAATAACTGTAAAGTAACACAAGAGTCTATACAAAAAGCTATAAA AACAGCTCAAACATTAGGCAATATTGCAGCTGAAAAGATATTAAATCCTAATATTAAACTAAAAAAACCACCACGCAAAA AAAAAAGTGAAATACAATATTCTAATTTCAAAGAAGCTGAAATAAAAGATAAATTCAAACATTGTACTTCTTGCCCTAAT GATTACGAGATATTTTTAACTAAATTTTTTAAGATTGTTCACTCTTGTAATAAAAATGATATTAATAAATTCATTAGCGA TTGCGAAATATGCCTACAATCCAGTAATGAGGATAATGAAAAAAATTATGTTATAGATTTCCTTATACAGGTTCAAAATT ATTTTATATTACCTGCTCACAAAACAGAAAGCCTTACTAAAGTTATATTGCCTTATTTTGAAGCAAAAGAAGATTGGTAT AACATTGCAGTATTCCATATAAACAGATGCATTGAGAACAAGATATTTCATTTCGAAAAAGCTATTGATGCTGTTTTTAA AATTAACAAAACCTCTGAAAGAGATAAGTATGCTTTTGTATCAACGGTATTGAAATATAATATACTAAATGATGCAGTAA ATTGGGCTAGATATTTAAAATTTTCAGATAAACTACAAAAATTTTCTACAGGTGTATATAATACACTGAATACAGCTATT TTATATAAAAAAATTTCAACTTTTATATTGAAAGGTGATAAAAACAATGCTGAAAAATATATAGAAAAATTACACGAATC GCTCCCAAAAGAAATTATACACTTAGAATACAGATTGAAATTTGATAGTAATTTTGATTACAGTAATGAAGTACAACGTG TATATAATATAAAGGCTAAAATTGACCAACAAAAATTAATGATTGCAGGTAGAATTTTATCAGAACCATTTCTAAGGGTT CTGATAAAATTTTGGCAACATTTTGATACCTGTAATAATGATCAGCAATGTAATAACATTCAACAAATTTACGATGATTT AGCAAAATATCGCTCATTATCAAGTGCGCAAGATGATATAATAAATCTTCTTAATAACTCTTCTATAAAAAACAAACCTG CATCAGATGTGATAGTTACAAATGATCTTAAAAAAGATGACATAGCTGATAAACGTAAAAATAATCAAGGCGTATCACTG AAAAAAGAATCATTAAATGACTATGCTACTACATCTTCTCATAAGAAGAATCAAGTAACTACCAAAAATGAGTTGGAGCA AAATGTAGAGACAAAATCAGGAGATGCAGTAGATTTTTTAGATAATGTGAACACAGATGAAGTAAGTGAAGTAGATGAAA ATATAGATAATTCATGTGTAAATAATACTGTATTTGATGAACAGTATACACCAGATGAGTTTTATACAAAATTAATGCAA GTATATACAAATCACAATACTTTGTTTACAAATCATGATAAGCATCAGCACATTCATTGCCATACTAAAAAACATACTTA TTGTACCTTTGATCCAGATGTAAAGAAGTGTACATGGAATGGAAAGACATATTATTGCGCTATCTCTAAAGACCTCAAAT TAGATTCTGTAAAACAGATGTATTATCGTAATGCTTTAGAAAAAGAATTTGTTTCATCGAATATCAACCAATCTGGTATA AAATGCTTGCCTAATAAGATGTTTGAATTAAAGGTTTGCAAAGAAGATTTTAGATTATTAGCTTGTAATACATACGTAGA CAATAAAGGAAATTATTTTATTATTTTTAATAAAGAAACTAATCATACAGGAATATCAAATATTATTAGTAACTCAACTC TTAGCAATAATCCAATTTTGACAGAATCATGTAAAGACTGTAATGACGAAGCTGATAGTACTACAGTAAATACTGATATT ACCCCATGTGTAATAGGACAAATGCTTAATCAAACTGAATATTATAATGATTGTTAA
Upstream 100 bases:
>100_bases TTCATTAAAAGCATATTGATATAAATTCATATTTTGTCTTGAAAGATTAATATAAATTAAGTATTATGCGATATTATACA TTTAATAAGGAAATAAGCTT
Downstream 100 bases:
>100_bases TCATGCAACAAAAAAGTACACAAAATTAAATTTATTGTAACAAGTTTTCCAAGAGTTGGGAGATTTATATTAACTATAGT TCGATATAAGAGCTACATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 818; Mature: 818
Protein sequence:
>818_residues MKAKKKKHNKVVNLKNKTEKTANNSAAEQQIMEINAAFSDKIKKSLYKGAVLESIFACALKTEDIETLKIIESQNIKINT ECITELFVGFITEFSKYKFAIQWLQEQFSSIIDDLVTETPKIIKCMIIDSCENRDDELISFIIKNYSNKIDIDEAFDSLV TLNFGRGITLLLNNCKVTQESIQKAIKTAQTLGNIAAEKILNPNIKLKKPPRKKKSEIQYSNFKEAEIKDKFKHCTSCPN DYEIFLTKFFKIVHSCNKNDINKFISDCEICLQSSNEDNEKNYVIDFLIQVQNYFILPAHKTESLTKVILPYFEAKEDWY NIAVFHINRCIENKIFHFEKAIDAVFKINKTSERDKYAFVSTVLKYNILNDAVNWARYLKFSDKLQKFSTGVYNTLNTAI LYKKISTFILKGDKNNAEKYIEKLHESLPKEIIHLEYRLKFDSNFDYSNEVQRVYNIKAKIDQQKLMIAGRILSEPFLRV LIKFWQHFDTCNNDQQCNNIQQIYDDLAKYRSLSSAQDDIINLLNNSSIKNKPASDVIVTNDLKKDDIADKRKNNQGVSL KKESLNDYATTSSHKKNQVTTKNELEQNVETKSGDAVDFLDNVNTDEVSEVDENIDNSCVNNTVFDEQYTPDEFYTKLMQ VYTNHNTLFTNHDKHQHIHCHTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGI KCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNNPILTESCKDCNDEADSTTVNTDI TPCVIGQMLNQTEYYNDC
Sequences:
>Translated_818_residues MKAKKKKHNKVVNLKNKTEKTANNSAAEQQIMEINAAFSDKIKKSLYKGAVLESIFACALKTEDIETLKIIESQNIKINT ECITELFVGFITEFSKYKFAIQWLQEQFSSIIDDLVTETPKIIKCMIIDSCENRDDELISFIIKNYSNKIDIDEAFDSLV TLNFGRGITLLLNNCKVTQESIQKAIKTAQTLGNIAAEKILNPNIKLKKPPRKKKSEIQYSNFKEAEIKDKFKHCTSCPN DYEIFLTKFFKIVHSCNKNDINKFISDCEICLQSSNEDNEKNYVIDFLIQVQNYFILPAHKTESLTKVILPYFEAKEDWY NIAVFHINRCIENKIFHFEKAIDAVFKINKTSERDKYAFVSTVLKYNILNDAVNWARYLKFSDKLQKFSTGVYNTLNTAI LYKKISTFILKGDKNNAEKYIEKLHESLPKEIIHLEYRLKFDSNFDYSNEVQRVYNIKAKIDQQKLMIAGRILSEPFLRV LIKFWQHFDTCNNDQQCNNIQQIYDDLAKYRSLSSAQDDIINLLNNSSIKNKPASDVIVTNDLKKDDIADKRKNNQGVSL KKESLNDYATTSSHKKNQVTTKNELEQNVETKSGDAVDFLDNVNTDEVSEVDENIDNSCVNNTVFDEQYTPDEFYTKLMQ VYTNHNTLFTNHDKHQHIHCHTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGI KCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNNPILTESCKDCNDEADSTTVNTDI TPCVIGQMLNQTEYYNDC >Mature_818_residues MKAKKKKHNKVVNLKNKTEKTANNSAAEQQIMEINAAFSDKIKKSLYKGAVLESIFACALKTEDIETLKIIESQNIKINT ECITELFVGFITEFSKYKFAIQWLQEQFSSIIDDLVTETPKIIKCMIIDSCENRDDELISFIIKNYSNKIDIDEAFDSLV TLNFGRGITLLLNNCKVTQESIQKAIKTAQTLGNIAAEKILNPNIKLKKPPRKKKSEIQYSNFKEAEIKDKFKHCTSCPN DYEIFLTKFFKIVHSCNKNDINKFISDCEICLQSSNEDNEKNYVIDFLIQVQNYFILPAHKTESLTKVILPYFEAKEDWY NIAVFHINRCIENKIFHFEKAIDAVFKINKTSERDKYAFVSTVLKYNILNDAVNWARYLKFSDKLQKFSTGVYNTLNTAI LYKKISTFILKGDKNNAEKYIEKLHESLPKEIIHLEYRLKFDSNFDYSNEVQRVYNIKAKIDQQKLMIAGRILSEPFLRV LIKFWQHFDTCNNDQQCNNIQQIYDDLAKYRSLSSAQDDIINLLNNSSIKNKPASDVIVTNDLKKDDIADKRKNNQGVSL KKESLNDYATTSSHKKNQVTTKNELEQNVETKSGDAVDFLDNVNTDEVSEVDENIDNSCVNNTVFDEQYTPDEFYTKLMQ VYTNHNTLFTNHDKHQHIHCHTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGI KCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNNPILTESCKDCNDEADSTTVNTDI TPCVIGQMLNQTEYYNDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94664; Mature: 94664
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKKKKHNKVVNLKNKTEKTANNSAAEQQIMEINAAFSDKIKKSLYKGAVLESIFACAL CCCCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTEDIETLKIIESQNIKINTECITELFVGFITEFSKYKFAIQWLQEQFSSIIDDLVTETP CCCCCHHHEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KIIKCMIIDSCENRDDELISFIIKNYSNKIDIDEAFDSLVTLNFGRGITLLLNNCKVTQE HHEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCEEEEEECCCCCHH SIQKAIKTAQTLGNIAAEKILNPNIKLKKPPRKKKSEIQYSNFKEAEIKDKFKHCTSCPN HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC DYEIFLTKFFKIVHSCNKNDINKFISDCEICLQSSNEDNEKNYVIDFLIQVQNYFILPAH HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCEEEEECC KTESLTKVILPYFEAKEDWYNIAVFHINRCIENKIFHFEKAIDAVFKINKTSERDKYAFV CHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH STVLKYNILNDAVNWARYLKFSDKLQKFSTGVYNTLNTAILYKKISTFILKGDKNNAEKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH IEKLHESLPKEIIHLEYRLKFDSNFDYSNEVQRVYNIKAKIDQQKLMIAGRILSEPFLRV HHHHHHHCCHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH LIKFWQHFDTCNNDQQCNNIQQIYDDLAKYRSLSSAQDDIINLLNNSSIKNKPASDVIVT HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEE NDLKKDDIADKRKNNQGVSLKKESLNDYATTSSHKKNQVTTKNELEQNVETKSGDAVDFL CCCCCCHHHHHHCCCCCCEEEHHHCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH DNVNTDEVSEVDENIDNSCVNNTVFDEQYTPDEFYTKLMQVYTNHNTLFTNHDKHQHIHC HCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEE HTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGI ECCCCEEEECCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC KCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNNPIL HHHCCHHHHHHEEHHCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCC TESCKDCNDEADSTTVNTDITPCVIGQMLNQTEYYNDC CCHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKAKKKKHNKVVNLKNKTEKTANNSAAEQQIMEINAAFSDKIKKSLYKGAVLESIFACAL CCCCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTEDIETLKIIESQNIKINTECITELFVGFITEFSKYKFAIQWLQEQFSSIIDDLVTETP CCCCCHHHEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KIIKCMIIDSCENRDDELISFIIKNYSNKIDIDEAFDSLVTLNFGRGITLLLNNCKVTQE HHEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCCEEEEEECCCCCHH SIQKAIKTAQTLGNIAAEKILNPNIKLKKPPRKKKSEIQYSNFKEAEIKDKFKHCTSCPN HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCC DYEIFLTKFFKIVHSCNKNDINKFISDCEICLQSSNEDNEKNYVIDFLIQVQNYFILPAH HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCEEEEECC KTESLTKVILPYFEAKEDWYNIAVFHINRCIENKIFHFEKAIDAVFKINKTSERDKYAFV CHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH STVLKYNILNDAVNWARYLKFSDKLQKFSTGVYNTLNTAILYKKISTFILKGDKNNAEKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH IEKLHESLPKEIIHLEYRLKFDSNFDYSNEVQRVYNIKAKIDQQKLMIAGRILSEPFLRV HHHHHHHCCHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH LIKFWQHFDTCNNDQQCNNIQQIYDDLAKYRSLSSAQDDIINLLNNSSIKNKPASDVIVT HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEE NDLKKDDIADKRKNNQGVSLKKESLNDYATTSSHKKNQVTTKNELEQNVETKSGDAVDFL CCCCCCHHHHHHCCCCCCEEEHHHCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH DNVNTDEVSEVDENIDNSCVNNTVFDEQYTPDEFYTKLMQVYTNHNTLFTNHDKHQHIHC HCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEE HTKKHTYCTFDPDVKKCTWNGKTYYCAISKDLKLDSVKQMYYRNALEKEFVSSNINQSGI ECCCCEEEECCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC KCLPNKMFELKVCKEDFRLLACNTYVDNKGNYFIIFNKETNHTGISNIISNSTLSNNPIL HHHCCHHHHHHEEHHCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCC TESCKDCNDEADSTTVNTDITPCVIGQMLNQTEYYNDC CCHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA