| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284242
Identifier: 148284242
GI number: 148284242
Start: 387862
End: 389760
Strand: Direct
Name: 148284242
Synonym: OTBS_0408
Alternate gene names: NA
Gene position: 387862-389760 (Clockwise)
Preceding gene: 148284240
Following gene: 148284243
Centisome position: 18.23
GC content: 28.86
Gene sequence:
>1899_bases ATGTTATATAGGGTATTATTACTACAATTAATGGTTTTAATTGTAACAATCAATCCAATACATGCAAGATGGAAGTATTA TAATGACAGTAATTTAGAAATAATACACTTCGAACAAAATATCATAGTTAATAGCGATGGTTCAAGTGAAGAGATAATAG AGCAGCAGGTAAAAATCCTCAATGAGGTTGGTCGTAAATTTTTTACTAATTATATGATAGAATATGATAGTGTACATTCT CAAATAGATATAATAATTGCTAAAACAATCTTCGAAGGAAAAGAATATAATGTAGATCTTAAAACAATTAAGAGCATACC TTTAGCTAGTAGCAGTCAGGGTTTTCATCAACAGCAGCAAATTTTAATAAATTTTGCTAAAGTTGAAATTGGATCAGAAA TACATTTAACATATACGAGAAAAAATCAGACAAATGCTGAAAATTATTATAGTAACTTATTTGAATTTGGTACTAATAGT TGGCAACAAAAAGCACATATAAAAATTAATTCTGTATTACCTTTATATATTAAAATTAATGATCCTCATAATGCTTTGGA AGTAAAAACAAGCTCTAAAGATAAGTTTCATTCTGCTGAAATAACTTTAATTAAGCCATTAACTACTGAGTTAACAAACG AACCTGAAAACTCATTATTAAGCAATCAGTTTAAAACGTGGGTATCTATTGCATCTACTAACACATGGGAAGATGTAGCA AGCAAATTTACTGATGATTATTATAAAATACTAAATCAAAAATTACCGAAGTTGTTTAAAACTATTGCTAATAAAGCACA AAAACATACAAAATCTGAAGATCAAATTAATTCTGTTACTTCAGATTTAATTCATGCAGTTCAATATCATGGAGATTATA GATCCATTAGATATGGTAAATCTGTACCCTGGAGCTTAGAACAAACAGCTAATACTCAATTAGGCGATTGTAAAGATTTC TCAATTAGTACAGCAGCAATTTTACAAAACATAGGTTACAAAGTACAGCCAGCTTTTGTTAATAGAGGAATACAAGCTTT TGAAACTAAATTATGGCTTCCTTCTGTAGAACATTATAATCATGCAATACTTAGAGCAATAGATAAAGATGGCAAGTTAT ATTGGATTGATCCTACGAATTTTGTGAGTATGGCTGATGGAATTTTTCCTGATATTGCTAATAGAATGTCACTAGTATTA GATCCAGAAAACCCTAGCTGTGATCATATACCAAATATTAATCCAAATCATTCTCAGTTGATAATAGAAGAGTCAATCTC AAGAGCTGAAAACAATTCAGCTTACTGGAAAGGTAAATTAATACTTCTAGGAGAGCAAGCGTATTCAATAACTGGAGCAG AATTGAAAATGTCGCAACAGCAGATAAAAGATTTGATTTTTAACTGGGCAAGTGGCTCTTTTTTAGAAGAGCACGATAAG ATCAAAATTATCTTACCAGATCTAACATCAAAAACAGTGAAAGATTTAACTTTTGAGTATGAATATAACAAGCCTAATTC CATATTTAAATCTAACATGGGTTCAGTATTAGTACCACTGAATTATTTATCTCATATTTCTAATGCAGAGCCAGAGCAGA TTGGCGATCTTTTTTTAGGTTCTCCATGCACTTTTATTCATCGAACTGTAATAAAAGATGTTAAAATAGAAAATATTAAT GTCTTTAATTTTGAAATTGATACTCCATGGGTTTACATTCAAAGAGCATGTCAATATCAAGGCAATGATACAGATATTAC AGTTAAAATGATAATTCATAAATCTTTAGTATCAAATAAAGATCTAAAAAGTGATATATACAAAAAATTAAAAGACGCTA TTAAACAAAACTTTGAATCAACAGCAATAGTTTTTGATGATTCTAAAATGATGAAATAA
Upstream 100 bases:
>100_bases TCTATAGTATAAATCTTAATATAATTCAAGAAAGCTATTATAGCTAGAAAAACGTCAGTTAGTTTACACAAGTACATTTA TATTTATTTTAGAATTAAAT
Downstream 100 bases:
>100_bases AGATATACCATACTCTATAAAGTAGCTATTAAGGTAACTTATGATATATAAAATCTTCAGAACTTTACTACAATTAGTAT TATTAGTAATATTTATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MLYRVLLLQLMVLIVTINPIHARWKYYNDSNLEIIHFEQNIIVNSDGSSEEIIEQQVKILNEVGRKFFTNYMIEYDSVHS QIDIIIAKTIFEGKEYNVDLKTIKSIPLASSSQGFHQQQQILINFAKVEIGSEIHLTYTRKNQTNAENYYSNLFEFGTNS WQQKAHIKINSVLPLYIKINDPHNALEVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQFKTWVSIASTNTWEDVA SKFTDDYYKILNQKLPKLFKTIANKAQKHTKSEDQINSVTSDLIHAVQYHGDYRSIRYGKSVPWSLEQTANTQLGDCKDF SISTAAILQNIGYKVQPAFVNRGIQAFETKLWLPSVEHYNHAILRAIDKDGKLYWIDPTNFVSMADGIFPDIANRMSLVL DPENPSCDHIPNINPNHSQLIIEESISRAENNSAYWKGKLILLGEQAYSITGAELKMSQQQIKDLIFNWASGSFLEEHDK IKIILPDLTSKTVKDLTFEYEYNKPNSIFKSNMGSVLVPLNYLSHISNAEPEQIGDLFLGSPCTFIHRTVIKDVKIENIN VFNFEIDTPWVYIQRACQYQGNDTDITVKMIIHKSLVSNKDLKSDIYKKLKDAIKQNFESTAIVFDDSKMMK
Sequences:
>Translated_632_residues MLYRVLLLQLMVLIVTINPIHARWKYYNDSNLEIIHFEQNIIVNSDGSSEEIIEQQVKILNEVGRKFFTNYMIEYDSVHS QIDIIIAKTIFEGKEYNVDLKTIKSIPLASSSQGFHQQQQILINFAKVEIGSEIHLTYTRKNQTNAENYYSNLFEFGTNS WQQKAHIKINSVLPLYIKINDPHNALEVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQFKTWVSIASTNTWEDVA SKFTDDYYKILNQKLPKLFKTIANKAQKHTKSEDQINSVTSDLIHAVQYHGDYRSIRYGKSVPWSLEQTANTQLGDCKDF SISTAAILQNIGYKVQPAFVNRGIQAFETKLWLPSVEHYNHAILRAIDKDGKLYWIDPTNFVSMADGIFPDIANRMSLVL DPENPSCDHIPNINPNHSQLIIEESISRAENNSAYWKGKLILLGEQAYSITGAELKMSQQQIKDLIFNWASGSFLEEHDK IKIILPDLTSKTVKDLTFEYEYNKPNSIFKSNMGSVLVPLNYLSHISNAEPEQIGDLFLGSPCTFIHRTVIKDVKIENIN VFNFEIDTPWVYIQRACQYQGNDTDITVKMIIHKSLVSNKDLKSDIYKKLKDAIKQNFESTAIVFDDSKMMK >Mature_632_residues MLYRVLLLQLMVLIVTINPIHARWKYYNDSNLEIIHFEQNIIVNSDGSSEEIIEQQVKILNEVGRKFFTNYMIEYDSVHS QIDIIIAKTIFEGKEYNVDLKTIKSIPLASSSQGFHQQQQILINFAKVEIGSEIHLTYTRKNQTNAENYYSNLFEFGTNS WQQKAHIKINSVLPLYIKINDPHNALEVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQFKTWVSIASTNTWEDVA SKFTDDYYKILNQKLPKLFKTIANKAQKHTKSEDQINSVTSDLIHAVQYHGDYRSIRYGKSVPWSLEQTANTQLGDCKDF SISTAAILQNIGYKVQPAFVNRGIQAFETKLWLPSVEHYNHAILRAIDKDGKLYWIDPTNFVSMADGIFPDIANRMSLVL DPENPSCDHIPNINPNHSQLIIEESISRAENNSAYWKGKLILLGEQAYSITGAELKMSQQQIKDLIFNWASGSFLEEHDK IKIILPDLTSKTVKDLTFEYEYNKPNSIFKSNMGSVLVPLNYLSHISNAEPEQIGDLFLGSPCTFIHRTVIKDVKIENIN VFNFEIDTPWVYIQRACQYQGNDTDITVKMIIHKSLVSNKDLKSDIYKKLKDAIKQNFESTAIVFDDSKMMK
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72507; Mature: 72507
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYRVLLLQLMVLIVTINPIHARWKYYNDSNLEIIHFEQNIIVNSDGSSEEIIEQQVKIL CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECEEEEECCCCHHHHHHHHHHHH NEVGRKFFTNYMIEYDSVHSQIDIIIAKTIFEGKEYNVDLKTIKSIPLASSSQGFHQQQQ HHHHHHHHHHHHEEECCCCCCEEEEEEEEHCCCCCCCEEHHHHCCCCCCCCCCCHHHHHH ILINFAKVEIGSEIHLTYTRKNQTNAENYYSNLFEFGTNSWQQKAHIKINSVLPLYIKIN HHHEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEEEC DPHNALEVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQFKTWVSIASTNTWEDVA CCCCEEEEECCCCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHEEEECCCCHHHHH SKFTDDYYKILNQKLPKLFKTIANKAQKHTKSEDQINSVTSDLIHAVQYHGDYRSIRYGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC SVPWSLEQTANTQLGDCKDFSISTAAILQNIGYKVQPAFVNRGIQAFETKLWLPSVEHYN CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHCCHHHHHHHHCCCCHHHHC HAILRAIDKDGKLYWIDPTNFVSMADGIFPDIANRMSLVLDPENPSCDHIPNINPNHSQL HHHHHEECCCCCEEEECCCCHHHHHCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCEE IIEESISRAENNSAYWKGKLILLGEQAYSITGAELKMSQQQIKDLIFNWASGSFLEEHDK EEHHHHHHCCCCCCEEEEEEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCC IKIILPDLTSKTVKDLTFEYEYNKPNSIFKSNMGSVLVPLNYLSHISNAEPEQIGDLFLG EEEEECCCCCHHHHHEEEEEECCCCCHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHCC SPCTFIHRTVIKDVKIENINVFNFEIDTPWVYIQRACQYQGNDTDITVKMIIHKSLVSNK CCHHHHHHHHHHHCEECEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEHHHHHCCC DLKSDIYKKLKDAIKQNFESTAIVFDDSKMMK CHHHHHHHHHHHHHHCCCCCEEEEECCHHCCC >Mature Secondary Structure MLYRVLLLQLMVLIVTINPIHARWKYYNDSNLEIIHFEQNIIVNSDGSSEEIIEQQVKIL CHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECEEEEECCCCHHHHHHHHHHHH NEVGRKFFTNYMIEYDSVHSQIDIIIAKTIFEGKEYNVDLKTIKSIPLASSSQGFHQQQQ HHHHHHHHHHHHEEECCCCCCEEEEEEEEHCCCCCCCEEHHHHCCCCCCCCCCCHHHHHH ILINFAKVEIGSEIHLTYTRKNQTNAENYYSNLFEFGTNSWQQKAHIKINSVLPLYIKIN HHHEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEEEC DPHNALEVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQFKTWVSIASTNTWEDVA CCCCEEEEECCCCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHEEEECCCCHHHHH SKFTDDYYKILNQKLPKLFKTIANKAQKHTKSEDQINSVTSDLIHAVQYHGDYRSIRYGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC SVPWSLEQTANTQLGDCKDFSISTAAILQNIGYKVQPAFVNRGIQAFETKLWLPSVEHYN CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHCCHHHHHHHHCCCCHHHHC HAILRAIDKDGKLYWIDPTNFVSMADGIFPDIANRMSLVLDPENPSCDHIPNINPNHSQL HHHHHEECCCCCEEEECCCCHHHHHCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCCCEE IIEESISRAENNSAYWKGKLILLGEQAYSITGAELKMSQQQIKDLIFNWASGSFLEEHDK EEHHHHHHCCCCCCEEEEEEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCC IKIILPDLTSKTVKDLTFEYEYNKPNSIFKSNMGSVLVPLNYLSHISNAEPEQIGDLFLG EEEEECCCCCHHHHHEEEEEECCCCCHHHHCCCCCEEEEHHHHHHCCCCCHHHHHHHHCC SPCTFIHRTVIKDVKIENINVFNFEIDTPWVYIQRACQYQGNDTDITVKMIIHKSLVSNK CCHHHHHHHHHHHCEECEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEHHHHHCCC DLKSDIYKKLKDAIKQNFESTAIVFDDSKMMK CHHHHHHHHHHHHHHCCCCCEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA