Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is rhp2

Identifier: 148284005

GI number: 148284005

Start: 10369

End: 12168

Strand: Direct

Name: rhp2

Synonym: OTBS_0009

Alternate gene names: NA

Gene position: 10369-12168 (Clockwise)

Preceding gene: 148284004

Following gene: 148284012

Centisome position: 0.49

GC content: 29.11

Gene sequence:

>1800_bases
ATGCTTAAAGATAGAATTACAAAAAGTATATTAGCAACGAAGTTATTTAAAACATTAATAGCTTCTAATCAATCTAAATT
TACAGAAGAAGATATTTTATTGTTAAGTGAAAATCTTATAAAAACCTTAAGCAGCATTTCTGAAAAAAATAGTATGGCAA
GTATAGAAGAATACCAAAAATGTCTTTCTGATTTAGATGATCGAGACTTAAGCAAAGTATTGAAAGTATTACAGGATATT
TTTGCAGGGGAGGAGCATAAAGAATTCAGAAAAATTATTGAGTTACCACTTTTAGATAGACTAACTACACAATTTAAAAT
AGAACGTATACAAGAATTAAATAATCAACAAACAGGAAATTTTAATAAAAACTTAAGCAATAACAATATTGAGGAGCTGC
TGCGTGATAAAAACATTGCTAAACAAGGAGATTTTTCTCCTAAAAGCCCTAAACAAGCTGGGGTTTCTGCAGGATATATT
GCTACTGAAAAGTCTAGTGGTAATACTTTTCTTCTAAAGCAGTTTTATAAAAGCAATGCTAGTGCCAAAAAAATCTCAAG
AAGTATTTTATGTTGTATAAATTCACAGAAATTAAACCAAGCTCAAAGTGATATGATAGATGCTATGCAAGAATTACTAG
CATCACAGATGTATCAATTATTATTATATGATCGAGCTCCTAAAGAAGCGTTAACAATACCAGATAAATTGAATTCAGAT
TCTCTTTATATACGATCTAAGTTTCTTAAGAACGCAGTAACACTTTCTGAGTTATCTGGTTTAAAAGATGTTACTTGGGT
TGATCCAAGCGCTAGATGTCTAAAACAATTAGAAGGATTTGAAAAAGTAATTGCTGCTTGCCATGTATTAGGAGATATAG
ATTATCATGCTGCTAATTTAATAGTACTTGATGGTAAAACTGTGGCTAAAATAGATCATGGCAGATCATTTATGGAATTT
TATAAAGATTTTGCAAATATGGTTAACTCAACATATAAAAGATTTAAAAGCAGAGGTAAAAATTATGCTTTAGCAATTCA
ATATGGTAATTTGTGCTTTGATATTGGCAAATATAATACTGCATTAAGACAAATGATAGATCAATTGAATGAAGAGCAGA
TAGAGATTATAATAGGGCAAAAAGCTGCTGAGCTAAGAAAGTTAGGATTTAATCCAAATGACTTAATTGTACAAGCGGGC
TTTGGAAGTGATATAGTTAATAGTACTGTCATAAGTGACTACAAAGATCTTGAAAATTTTTATAAAGAAAATCTGAAAAA
AAGCCTTCAAAATATGAAAGAAATAGCTAAAGCAACAAATATAGTAGCCAAGTTTAGCAGTGTATCTCAAAAGTTTAAAG
AAGGAGGATGGTTAGAAGCTTTTGCTACTTCTAGAATACAAGATCCAGTGTTATATGCACATAATACTAATATTGCAATT
GATCAAAAAAGTGCCTTAGAATGGGCTATTACTAATAATTATGAGATTAAACATTATGACAGTAATATATACTCTAATTG
GCAACAAGAATGGCTAAAAAGTAATTATGATAAATTGCAAAAAATAAACCAGTGTATTTTGACGCAAGAAAAAAAAATAG
TTGAATTTAATGCTGCAGATCGTATTATAGAAAGCGAAAATCATCAAAAAAGTTTAAATAATAAAATTGATTTTTTATCA
AGTAGTAAGGAAGTATTACTAAAGTCTAAAGTCAAGCATCAGTTTGATATTAACCAAAAAAAAGAACCTGCAGTATTTAA
GCTCAAACCTAAAACTTCACAAGGAAGGAGCATGGTTTGA

Upstream 100 bases:

>100_bases
ATAGCTTATTCGAAGGTTTATATATTCTCTTTTTTTCAGTAACTAAATTTAGAAAATTTAAATATATATGCAAAGATATA
TTGATTAATGAGGGCTTTAA

Downstream 100 bases:

>100_bases
CTATATAGTCTAACTCATCAAATGTATCAATTTATAGATTATCTTGTCTATTAACGTCAGTTTAGGATAAGAAAAAGTAT
GAAAGGCATAATACAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MLKDRITKSILATKLFKTLIASNQSKFTEEDILLLSENLIKTLSSISEKNSMASIEEYQKCLSDLDDRDLSKVLKVLQDI
FAGEEHKEFRKIIELPLLDRLTTQFKIERIQELNNQQTGNFNKNLSNNNIEELLRDKNIAKQGDFSPKSPKQAGVSAGYI
ATEKSSGNTFLLKQFYKSNASAKKISRSILCCINSQKLNQAQSDMIDAMQELLASQMYQLLLYDRAPKEALTIPDKLNSD
SLYIRSKFLKNAVTLSELSGLKDVTWVDPSARCLKQLEGFEKVIAACHVLGDIDYHAANLIVLDGKTVAKIDHGRSFMEF
YKDFANMVNSTYKRFKSRGKNYALAIQYGNLCFDIGKYNTALRQMIDQLNEEQIEIIIGQKAAELRKLGFNPNDLIVQAG
FGSDIVNSTVISDYKDLENFYKENLKKSLQNMKEIAKATNIVAKFSSVSQKFKEGGWLEAFATSRIQDPVLYAHNTNIAI
DQKSALEWAITNNYEIKHYDSNIYSNWQQEWLKSNYDKLQKINQCILTQEKKIVEFNAADRIIESENHQKSLNNKIDFLS
SSKEVLLKSKVKHQFDINQKKEPAVFKLKPKTSQGRSMV

Sequences:

>Translated_599_residues
MLKDRITKSILATKLFKTLIASNQSKFTEEDILLLSENLIKTLSSISEKNSMASIEEYQKCLSDLDDRDLSKVLKVLQDI
FAGEEHKEFRKIIELPLLDRLTTQFKIERIQELNNQQTGNFNKNLSNNNIEELLRDKNIAKQGDFSPKSPKQAGVSAGYI
ATEKSSGNTFLLKQFYKSNASAKKISRSILCCINSQKLNQAQSDMIDAMQELLASQMYQLLLYDRAPKEALTIPDKLNSD
SLYIRSKFLKNAVTLSELSGLKDVTWVDPSARCLKQLEGFEKVIAACHVLGDIDYHAANLIVLDGKTVAKIDHGRSFMEF
YKDFANMVNSTYKRFKSRGKNYALAIQYGNLCFDIGKYNTALRQMIDQLNEEQIEIIIGQKAAELRKLGFNPNDLIVQAG
FGSDIVNSTVISDYKDLENFYKENLKKSLQNMKEIAKATNIVAKFSSVSQKFKEGGWLEAFATSRIQDPVLYAHNTNIAI
DQKSALEWAITNNYEIKHYDSNIYSNWQQEWLKSNYDKLQKINQCILTQEKKIVEFNAADRIIESENHQKSLNNKIDFLS
SSKEVLLKSKVKHQFDINQKKEPAVFKLKPKTSQGRSMV
>Mature_599_residues
MLKDRITKSILATKLFKTLIASNQSKFTEEDILLLSENLIKTLSSISEKNSMASIEEYQKCLSDLDDRDLSKVLKVLQDI
FAGEEHKEFRKIIELPLLDRLTTQFKIERIQELNNQQTGNFNKNLSNNNIEELLRDKNIAKQGDFSPKSPKQAGVSAGYI
ATEKSSGNTFLLKQFYKSNASAKKISRSILCCINSQKLNQAQSDMIDAMQELLASQMYQLLLYDRAPKEALTIPDKLNSD
SLYIRSKFLKNAVTLSELSGLKDVTWVDPSARCLKQLEGFEKVIAACHVLGDIDYHAANLIVLDGKTVAKIDHGRSFMEF
YKDFANMVNSTYKRFKSRGKNYALAIQYGNLCFDIGKYNTALRQMIDQLNEEQIEIIIGQKAAELRKLGFNPNDLIVQAG
FGSDIVNSTVISDYKDLENFYKENLKKSLQNMKEIAKATNIVAKFSSVSQKFKEGGWLEAFATSRIQDPVLYAHNTNIAI
DQKSALEWAITNNYEIKHYDSNIYSNWQQEWLKSNYDKLQKINQCILTQEKKIVEFNAADRIIESENHQKSLNNKIDFLS
SSKEVLLKSKVKHQFDINQKKEPAVFKLKPKTSQGRSMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68323; Mature: 68323

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDRITKSILATKLFKTLIASNQSKFTEEDILLLSENLIKTLSSISEKNSMASIEEYQK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLSDLDDRDLSKVLKVLQDIFAGEEHKEFRKIIELPLLDRLTTQFKIERIQELNNQQTGN
HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FNKNLSNNNIEELLRDKNIAKQGDFSPKSPKQAGVSAGYIATEKSSGNTFLLKQFYKSNA
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHCCC
SAKKISRSILCCINSQKLNQAQSDMIDAMQELLASQMYQLLLYDRAPKEALTIPDKLNSD
HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SLYIRSKFLKNAVTLSELSGLKDVTWVDPSARCLKQLEGFEKVIAACHVLGDIDYHAANL
CHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
IVLDGKTVAKIDHGRSFMEFYKDFANMVNSTYKRFKSRGKNYALAIQYGNLCFDIGKYNT
EEECCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHH
ALRQMIDQLNEEQIEIIIGQKAAELRKLGFNPNDLIVQAGFGSDIVNSTVISDYKDLENF
HHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
YKENLKKSLQNMKEIAKATNIVAKFSSVSQKFKEGGWLEAFATSRIQDPVLYAHNTNIAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCEEE
DQKSALEWAITNNYEIKHYDSNIYSNWQQEWLKSNYDKLQKINQCILTQEKKIVEFNAAD
ECCCCEEEEECCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHEEECHHH
RIIESENHQKSLNNKIDFLSSSKEVLLKSKVKHQFDINQKKEPAVFKLKPKTSQGRSMV
HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MLKDRITKSILATKLFKTLIASNQSKFTEEDILLLSENLIKTLSSISEKNSMASIEEYQK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLSDLDDRDLSKVLKVLQDIFAGEEHKEFRKIIELPLLDRLTTQFKIERIQELNNQQTGN
HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FNKNLSNNNIEELLRDKNIAKQGDFSPKSPKQAGVSAGYIATEKSSGNTFLLKQFYKSNA
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHCCC
SAKKISRSILCCINSQKLNQAQSDMIDAMQELLASQMYQLLLYDRAPKEALTIPDKLNSD
HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SLYIRSKFLKNAVTLSELSGLKDVTWVDPSARCLKQLEGFEKVIAACHVLGDIDYHAANL
CHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
IVLDGKTVAKIDHGRSFMEFYKDFANMVNSTYKRFKSRGKNYALAIQYGNLCFDIGKYNT
EEECCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHH
ALRQMIDQLNEEQIEIIIGQKAAELRKLGFNPNDLIVQAGFGSDIVNSTVISDYKDLENF
HHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
YKENLKKSLQNMKEIAKATNIVAKFSSVSQKFKEGGWLEAFATSRIQDPVLYAHNTNIAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCEEE
DQKSALEWAITNNYEIKHYDSNIYSNWQQEWLKSNYDKLQKINQCILTQEKKIVEFNAAD
ECCCCEEEEECCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHEEECHHH
RIIESENHQKSLNNKIDFLSSSKEVLLKSKVKHQFDINQKKEPAVFKLKPKTSQGRSMV
HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]