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The map label for this gene is nusB [H]

Identifier: 148261108

GI number: 148261108

Start: 2345776

End: 2346273

Strand: Reverse

Name: nusB [H]

Synonym: Acry_2117

Alternate gene names: 148261108

Gene position: 2346273-2345776 (Counterclockwise)

Preceding gene: 148261109

Following gene: 148261107

Centisome position: 69.23

GC content: 71.49

Gene sequence:

>498_bases
ATGAAACCGGCGGGAAGCAAGGCGCGGCCGCGCACGCTCGCCCGCGCCGCGGCGGTGCAGGCGCTCTACCAGTGCGAGCA
TGCCGGCGAGACGGCCGAAACCGTGATCGACCAGTTCGTCCGCCACCGTTTCGGGCGGATGGCGGGGATGCTCGGCGTCG
AGGAAGGCGAGGTTCCGCCGCCCGATGTGCCGCTGTTCTCGCGCATCGTCCGCACCGCGACGGCGCAGCAGGACGTGGTC
GACCCGCTGATCGCCGGCGTGCTGCCCGAAGCCTGGCCGATGCCGCGGCTCGATCCGGTGCTGCGAGCCCTGCTGCGCGC
CGCTGGCGCCGAGCTGTGGATGACCGACGGGCCGCCGGCGCGGGTCGTCATCAACGAATATCTCGACGTGGCGCACGGCT
TCCTCGAAGGCGATGCGGTGCAGATGGGCAACGCCGTGCTCGACCGGATTGCCCGCACGCTGCGCGAAGGCGAGTTCACC
GACCCCGTCAGGGCATGA

Upstream 100 bases:

>100_bases
AGGCGGAGGCGCGCTCGGCCGAGACCGGATCGAACAAGGGGGCCGAGGCGGCATCGGCCTGTCTGCGGCAGATCGCCCTC
GCGCGTCGTCTGGGGGCGGC

Downstream 100 bases:

>100_bases
AGTGAGCGGCGAGTTCGGCCGCATCGCCCGGTATTTCGCGCCGCTCGCCTCGGCGGAAGCGCTCGGCCTGGCCGACGATG
CCGCGCTCTGGACGCCGCCG

Product: NusB antitermination factor

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKPAGSKARPRTLARAAAVQALYQCEHAGETAETVIDQFVRHRFGRMAGMLGVEEGEVPPPDVPLFSRIVRTATAQQDVV
DPLIAGVLPEAWPMPRLDPVLRALLRAAGAELWMTDGPPARVVINEYLDVAHGFLEGDAVQMGNAVLDRIARTLREGEFT
DPVRA

Sequences:

>Translated_165_residues
MKPAGSKARPRTLARAAAVQALYQCEHAGETAETVIDQFVRHRFGRMAGMLGVEEGEVPPPDVPLFSRIVRTATAQQDVV
DPLIAGVLPEAWPMPRLDPVLRALLRAAGAELWMTDGPPARVVINEYLDVAHGFLEGDAVQMGNAVLDRIARTLREGEFT
DPVRA
>Mature_165_residues
MKPAGSKARPRTLARAAAVQALYQCEHAGETAETVIDQFVRHRFGRMAGMLGVEEGEVPPPDVPLFSRIVRTATAQQDVV
DPLIAGVLPEAWPMPRLDPVLRALLRAAGAELWMTDGPPARVVINEYLDVAHGFLEGDAVQMGNAVLDRIARTLREGEFT
DPVRA

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 17946; Mature: 17946

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAGSKARPRTLARAAAVQALYQCEHAGETAETVIDQFVRHRFGRMAGMLGVEEGEVPP
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDVPLFSRIVRTATAQQDVVDPLIAGVLPEAWPMPRLDPVLRALLRAAGAELWMTDGPPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCH
RVVINEYLDVAHGFLEGDAVQMGNAVLDRIARTLREGEFTDPVRA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKPAGSKARPRTLARAAAVQALYQCEHAGETAETVIDQFVRHRFGRMAGMLGVEEGEVPP
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDVPLFSRIVRTATAQQDVVDPLIAGVLPEAWPMPRLDPVLRALLRAAGAELWMTDGPPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCH
RVVINEYLDVAHGFLEGDAVQMGNAVLDRIARTLREGEFTDPVRA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA