| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is uxuA2 [H]
Identifier: 148260852
GI number: 148260852
Start: 2048972
End: 2050153
Strand: Reverse
Name: uxuA2 [H]
Synonym: Acry_1858
Alternate gene names: 148260852
Gene position: 2050153-2048972 (Counterclockwise)
Preceding gene: 148260853
Following gene: 148260851
Centisome position: 60.49
GC content: 72.93
Gene sequence:
>1182_bases ATGGAAGAAACCTGGCGCTGGTTCGGGCCGGAAGATCCGATCCCGCTCGAGCATGTGCGGCAGGCGGGGGCGACCGGCGT GGTGACGGCGCTGCACGACATTCCGCCCGGCGAGCCCTGGCCTGTCGCCGCGGCGCAGGCGCGGCGCGACGCGATCGAGG CCGCCGGGCTGCGCTGGAGCGTGTGCGAGTCGATCCCGGTGCCGACCGGTATCAAGTGCCGCGACCATGACTGGCCGCGT CTCGTCGCGGTGTGGAAGGACTCGCTCGCCGCGGTGGCGCGGGCGGGGGTCGGCGTGATCTGCTACAATTTCATGCCGGT GATCGACTGGACGCGCACCGAACTTGCCCACGAGATGCCGGACGGGGCGAAGGCGCTGCGCTTCGACATGGTGGATTTCA TCGGCTACGACGTCTTCGTGCTGCGCCGCGCCGGGGCGGCGTCGTGCTATCCGGCGCCGCTGGTCGCGCAGGCGGAGGCG CGGATGGCGGCGTGCGACGCGGCGGCGCTGGCGCGGCTGGAACGGACCATCATCGCCGGCCTGCCGGGCGGGGCGGCGGC GCAGACGCGGGAGACCATCGCCGCCGAGATCGCCCGGTTCGACGGGCTGGACGACGCGGCGGTGCGCGCCAATCTGGTCG ATTTCCTGCGCGAGGTGGTGCCGGTGGCCGAGGAACTCGGCGTGCGGCTCGCGATCCATCCCGACGATCCGCCGGTGAAG CTGTTCGGCCTGCCGCGCGTGGTCTCGACGCTGGAGGATCTGGCGATGCTGTTCGAGGCGGTGCCCTCGCGAGCGAACGG GCTGACGCTCTGCGCCGGGTCGCTCGGGTCGCGCGCGGATAACGACGTGCTGGCGATCGCCGAGACGTTCCGCAGCCGCA TCCATTTCGCCCATCTGCGCAACGTGACGGTCGAGCCGGACGGGTCCTTCGTCGAGGCGCCGCATCTCGGCGGGCGGACC GACATGGTGGCCCTGCTCGCCCTGCTGCTGCGCGAGGAACGCGAGGCGGCGGCGGCGGGGCGGCGGGCGTCGATCCCGCT GCGGCCGGACCACGGGCATCTGCTCGCGGCCGATGCCGCCAGGCGCGTCAATCCCGGCTATTCCTATATCGGCCGGCTGC GCGGGCTGGCGGAGCTGCGTGGCGTGATCCGCGCGCTCGAAGCCCTGGCGCCGGCGGCGTGA
Upstream 100 bases:
>100_bases TGATCGCCGAGGAATGCGGCGCGATGGCGCGGCAGGGGCTGGCGGCACGGCTCGACGCGCTCTGCCGCGCGCCGGACTGA CAAGGGGAAAGGGCAGGGCG
Downstream 100 bases:
>100_bases TGTTCGCCGCCATCGGGGAATGCCTCGCGGAGTTCGCGCCGAACGAAGCGGGCGGCTACGCGCTCGGTTTCGCGGGCGAT ACGTTCAACGCCGCCTGGGC
Product: mannonate dehydratase
Products: NA
Alternate protein names: D-mannonate hydrolase 2 [H]
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MEETWRWFGPEDPIPLEHVRQAGATGVVTALHDIPPGEPWPVAAAQARRDAIEAAGLRWSVCESIPVPTGIKCRDHDWPR LVAVWKDSLAAVARAGVGVICYNFMPVIDWTRTELAHEMPDGAKALRFDMVDFIGYDVFVLRRAGAASCYPAPLVAQAEA RMAACDAAALARLERTIIAGLPGGAAAQTRETIAAEIARFDGLDDAAVRANLVDFLREVVPVAEELGVRLAIHPDDPPVK LFGLPRVVSTLEDLAMLFEAVPSRANGLTLCAGSLGSRADNDVLAIAETFRSRIHFAHLRNVTVEPDGSFVEAPHLGGRT DMVALLALLLREEREAAAAGRRASIPLRPDHGHLLAADAARRVNPGYSYIGRLRGLAELRGVIRALEALAPAA
Sequences:
>Translated_393_residues MEETWRWFGPEDPIPLEHVRQAGATGVVTALHDIPPGEPWPVAAAQARRDAIEAAGLRWSVCESIPVPTGIKCRDHDWPR LVAVWKDSLAAVARAGVGVICYNFMPVIDWTRTELAHEMPDGAKALRFDMVDFIGYDVFVLRRAGAASCYPAPLVAQAEA RMAACDAAALARLERTIIAGLPGGAAAQTRETIAAEIARFDGLDDAAVRANLVDFLREVVPVAEELGVRLAIHPDDPPVK LFGLPRVVSTLEDLAMLFEAVPSRANGLTLCAGSLGSRADNDVLAIAETFRSRIHFAHLRNVTVEPDGSFVEAPHLGGRT DMVALLALLLREEREAAAAGRRASIPLRPDHGHLLAADAARRVNPGYSYIGRLRGLAELRGVIRALEALAPAA >Mature_393_residues MEETWRWFGPEDPIPLEHVRQAGATGVVTALHDIPPGEPWPVAAAQARRDAIEAAGLRWSVCESIPVPTGIKCRDHDWPR LVAVWKDSLAAVARAGVGVICYNFMPVIDWTRTELAHEMPDGAKALRFDMVDFIGYDVFVLRRAGAASCYPAPLVAQAEA RMAACDAAALARLERTIIAGLPGGAAAQTRETIAAEIARFDGLDDAAVRANLVDFLREVVPVAEELGVRLAIHPDDPPVK LFGLPRVVSTLEDLAMLFEAVPSRANGLTLCAGSLGSRADNDVLAIAETFRSRIHFAHLRNVTVEPDGSFVEAPHLGGRT DMVALLALLLREEREAAAAGRRASIPLRPDHGHLLAADAARRVNPGYSYIGRLRGLAELRGVIRALEALAPAA
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1312
COG function: function code G; D-mannonate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannonate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI1790778, Length=388, Percent_Identity=47.680412371134, Blast_Score=393, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004628 - InterPro: IPR013022 [H]
Pfam domain/function: PF03786 UxuA [H]
EC number: =4.2.1.8 [H]
Molecular weight: Translated: 42281; Mature: 42281
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEETWRWFGPEDPIPLEHVRQAGATGVVTALHDIPPGEPWPVAAAQARRDAIEAAGLRWS CCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHH VCESIPVPTGIKCRDHDWPRLVAVWKDSLAAVARAGVGVICYNFMPVIDWTRTELAHEMP HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHCC DGAKALRFDMVDFIGYDVFVLRRAGAASCYPAPLVAQAEARMAACDAAALARLERTIIAG CCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LPGGAAAQTRETIAAEIARFDGLDDAAVRANLVDFLREVVPVAEELGVRLAIHPDDPPVK CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEE LFGLPRVVSTLEDLAMLFEAVPSRANGLTLCAGSLGSRADNDVLAIAETFRSRIHFAHLR EEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC NVTVEPDGSFVEAPHLGGRTDMVALLALLLREEREAAAAGRRASIPLRPDHGHLLAADAA CCEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHH RRVNPGYSYIGRLRGLAELRGVIRALEALAPAA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEETWRWFGPEDPIPLEHVRQAGATGVVTALHDIPPGEPWPVAAAQARRDAIEAAGLRWS CCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHH VCESIPVPTGIKCRDHDWPRLVAVWKDSLAAVARAGVGVICYNFMPVIDWTRTELAHEMP HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHCC DGAKALRFDMVDFIGYDVFVLRRAGAASCYPAPLVAQAEARMAACDAAALARLERTIIAG CCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LPGGAAAQTRETIAAEIARFDGLDDAAVRANLVDFLREVVPVAEELGVRLAIHPDDPPVK CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEE LFGLPRVVSTLEDLAMLFEAVPSRANGLTLCAGSLGSRADNDVLAIAETFRSRIHFAHLR EEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC NVTVEPDGSFVEAPHLGGRTDMVALLALLLREEREAAAAGRRASIPLRPDHGHLLAADAA CCEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHH RRVNPGYSYIGRLRGLAELRGVIRALEALAPAA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]