Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is kdgK [H]

Identifier: 148260851

GI number: 148260851

Start: 2048079

End: 2048972

Strand: Reverse

Name: kdgK [H]

Synonym: Acry_1857

Alternate gene names: 148260851

Gene position: 2048972-2048079 (Counterclockwise)

Preceding gene: 148260852

Following gene: 148260848

Centisome position: 60.46

GC content: 75.95

Gene sequence:

>894_bases
ATGTTCGCCGCCATCGGGGAATGCCTCGCGGAGTTCGCGCCGAACGAAGCGGGCGGCTACGCGCTCGGTTTCGCGGGCGA
TACGTTCAACGCCGCCTGGGCGGCGCGGGTGCGGCTGCGCGGCGCGGTGCCGGTGCGCTACGTGACCGCGATCGGGACCG
ACTGGATGTCGGACGCGATGCGCGCGCGGATCGAGGCGGCCGGGATCGATGCCGCCTTCGTGCGGCGGGTCGAGGGCGCG
TCGGTCGGGCTGTATGTGATCCGGGTGGAGGCGGGCGAGCGGTCCTTCGCCTATTGGCGGCGGCAGTCGGCGGCGACGCA
TCTGGCCGACGATCCGGCATTCCTCGCACGGGCGCTGGCGGGCGCGCGGCTCGTGCTGGTCTCGGGCATCACGCTGGCGA
TCCTGCCGCCGGCGGGGCGGGCGGCGCTGCTGGACGCCCTCGGCGCGGCGCGGGCGGCGGGGGCCGAGATCGCCTTCGAT
ACCAATTACCGCCCGGCGCTGTGGCGCGACGCCGACGAGGCGCGGGAGACCGTCCGGCGCGTGCTGCCGCTCGTGGATAT
CGCGCTGCCGACCTTCGAGGACGAGGCGGCCCTGTTCGGCGACGCGGCGCCGGCGGCGACGGTCGCGCGGCTCGCGGCGG
CGGGGGTGCGGGATGTCGTCGTCAAGAACGGCACGGCGGCGACGCTGGGGCGCTGCGGTGCGGAGAGCTTCGAGGTGGTG
CCGCGCGAGGTGGTGACGCCGGTGGATTCGACCGGCGCGGGCGATGCGTTCAACGGCACCTTCCTCGCCTGCCGGTTGCA
GGGCATGGCGCCCGCGGCCGCGGTGGCGGCGGCGCAGGCGGTGGCGGCGCGGGCGGTGCTGACGCGCGGCGCGCTGATCG
CCGACGAGGCGTGA

Upstream 100 bases:

>100_bases
GGCGCGTCAATCCCGGCTATTCCTATATCGGCCGGCTGCGCGGGCTGGCGGAGCTGCGTGGCGTGATCCGCGCGCTCGAA
GCCCTGGCGCCGGCGGCGTG

Downstream 100 bases:

>100_bases
GCCGCGCTTAGAGCACTTTCCGATCCTTTTGGATCGGATGTAGTGCCCTATCATGCTGATAAATCGAGCATTTTTATCCG
ATCAGATGACTCCATCTGAT

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MFAAIGECLAEFAPNEAGGYALGFAGDTFNAAWAARVRLRGAVPVRYVTAIGTDWMSDAMRARIEAAGIDAAFVRRVEGA
SVGLYVIRVEAGERSFAYWRRQSAATHLADDPAFLARALAGARLVLVSGITLAILPPAGRAALLDALGAARAAGAEIAFD
TNYRPALWRDADEARETVRRVLPLVDIALPTFEDEAALFGDAAPAATVARLAAAGVRDVVVKNGTAATLGRCGAESFEVV
PREVVTPVDSTGAGDAFNGTFLACRLQGMAPAAAVAAAQAVAARAVLTRGALIADEA

Sequences:

>Translated_297_residues
MFAAIGECLAEFAPNEAGGYALGFAGDTFNAAWAARVRLRGAVPVRYVTAIGTDWMSDAMRARIEAAGIDAAFVRRVEGA
SVGLYVIRVEAGERSFAYWRRQSAATHLADDPAFLARALAGARLVLVSGITLAILPPAGRAALLDALGAARAAGAEIAFD
TNYRPALWRDADEARETVRRVLPLVDIALPTFEDEAALFGDAAPAATVARLAAAGVRDVVVKNGTAATLGRCGAESFEVV
PREVVTPVDSTGAGDAFNGTFLACRLQGMAPAAAVAAAQAVAARAVLTRGALIADEA
>Mature_297_residues
MFAAIGECLAEFAPNEAGGYALGFAGDTFNAAWAARVRLRGAVPVRYVTAIGTDWMSDAMRARIEAAGIDAAFVRRVEGA
SVGLYVIRVEAGERSFAYWRRQSAATHLADDPAFLARALAGARLVLVSGITLAILPPAGRAALLDALGAARAAGAEIAFD
TNYRPALWRDADEARETVRRVLPLVDIALPTFEDEAALFGDAAPAATVARLAAAGVRDVVVKNGTAATLGRCGAESFEVV
PREVVTPVDSTGAGDAFNGTFLACRLQGMAPAAAVAAAQAVAARAVLTRGALIADEA

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87082281, Length=305, Percent_Identity=37.0491803278689, Blast_Score=181, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.45 [H]

Molecular weight: Translated: 30685; Mature: 30685

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAAIGECLAEFAPNEAGGYALGFAGDTFNAAWAARVRLRGAVPVRYVTAIGTDWMSDAM
CCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHEEEEECCCCCEEHHHHHCCHHHHHHH
RARIEAAGIDAAFVRRVEGASVGLYVIRVEAGERSFAYWRRQSAATHLADDPAFLARALA
HHHHHHCCCCHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
GARLVLVSGITLAILPPAGRAALLDALGAARAAGAEIAFDTNYRPALWRDADEARETVRR
CCEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHH
VLPLVDIALPTFEDEAALFGDAAPAATVARLAAAGVRDVVVKNGTAATLGRCGAESFEVV
HHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHEECCCCHHHHHHCCCCHHHHC
PREVVTPVDSTGAGDAFNGTFLACRLQGMAPAAAVAAAQAVAARAVLTRGALIADEA
CHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MFAAIGECLAEFAPNEAGGYALGFAGDTFNAAWAARVRLRGAVPVRYVTAIGTDWMSDAM
CCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHEEEEECCCCCEEHHHHHCCHHHHHHH
RARIEAAGIDAAFVRRVEGASVGLYVIRVEAGERSFAYWRRQSAATHLADDPAFLARALA
HHHHHHCCCCHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
GARLVLVSGITLAILPPAGRAALLDALGAARAAGAEIAFDTNYRPALWRDADEARETVRR
CCEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHH
VLPLVDIALPTFEDEAALFGDAAPAATVARLAAAGVRDVVVKNGTAATLGRCGAESFEVV
HHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHEECCCCHHHHHHCCCCHHHHC
PREVVTPVDSTGAGDAFNGTFLACRLQGMAPAAAVAAAQAVAARAVLTRGALIADEA
CHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]