| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is pqqL [C]
Identifier: 148260781
GI number: 148260781
Start: 1968329
End: 1969594
Strand: Reverse
Name: pqqL [C]
Synonym: Acry_1786
Alternate gene names: 148260781
Gene position: 1969594-1968329 (Counterclockwise)
Preceding gene: 148260782
Following gene: 148260780
Centisome position: 58.11
GC content: 67.61
Gene sequence:
>1266_bases ATGAGTGACACAGTGCAGGTGACGAAACTCGACTCCGGCCTGACCATCCTGACCGAACGGATGGACCGGGTGGAGACCGT CTCCTTCGGCGCCTATGCCGGCGTCGGCACCCGCCACGAGACGGCGGCGGAAAACGGCGTCTCGCATTTCCTCGAACACA TGGCCTTCAAGGGCACCGAGCGCCGGAGTGCCGCCGCCATCGCCGAGGCGATCGAGGATGTCGGCGGCCACATCAACGCC TACACCTCGCGCGAGCAGACCGCCTATTACGTCAAGCTGCTGAAGGAGGATCTCTCCCTCGGCATCGACATCATCGGCGA CATCCTCTGCCATTCCACCTTCGATCCGGCGGAATTCGAGCGCGAGCGCGGCGTCATCCTGCAAGAGATCGGCCAGGCGA ACGACACGCCGGACGATATCGTGTTCGACCATTTCCAGCTCGCCGCCTATCCCGACCAGCCGATGGGCTGGCCCACCCTC GGCACCGAGGAGATCATCCGCGCCATCGGGCCGGACGCGCTGCGCCGCTACATGAAGGCGCATTACACGCCGGAGAACCT CGTCATCGCCGCTTCCGGCAATCTCGAACACGCCCGCGTGGTCGATCTCGTGGCGAAGCACTTCGCCGACCTGCCGGCCG CGACGCGCGCCGAGCCGCTGCCGGCCGATTATGCCGGCGGCGAATACCGCGAGCTGCGCGATCTCGACCAGGCGCATCTC GTCCTCGGCTTCCCCGCCGTCGGCTACGCCGATCCCGATTTCCACGCCGCGATGCTGCTCTCCACTTTGCTCGGCGGCGG CATGTCCTCGCGCCTGTTCCAGGAAATCCGCGAGAAGCGCGGCCTCGTCTACTCGATCTACAGCTTCGCCCTGCCGGCGC GCGATGCCGGGCTGTTCGGCATCTATGCCGGCACCGGCGAGGCCGAGGCGGCCGAACTCGTCCCCGTCACCCTCGGCGAG CTGGCCAAGGTTCGCCAGAGCGTCTCCGAGGCCGAACTCCGCCGCGCCCGCGCCCAGGTCAAGGCCGGGCTGCTGATGTC GCTGGAAAGCACCGGCAGCCGCTGCGAGCAGATCGCCCGCCAGTGGCAGATCTTCGGCCGCATCGTGCCGACCGCCGAAA CCGTCGCGAAGATCGACGCCGTGACGGTGGACGACATCACCAACGTCGCCACCCGCATCTTCCGCGCCAAGCCCACCCTT GCCGCGATCGGCCCGGTCGGCCGCGTGCCGCAGATGCCGAAAATCATCGAGAGGCTGGCGGCGTGA
Upstream 100 bases:
>100_bases TCGACGACCTATATGACCGTCAGGAACATTTCGTACGCGCGGGCAACAGCCTCGGCGAGGTCGAGACCCTGGTCCGCCAT TTCGCGCACAGGAACGATGC
Downstream 100 bases:
>100_bases ACCGGCTCGACCTGCTCGACGCCCTGCTCGACGCCGCGAAGCGCGCCGGCGCGGAGTCCGCCGATGCGCTGATGGGCTCC GGCACCTCGCTCTCCGTCGG
Product: processing peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MSDTVQVTKLDSGLTILTERMDRVETVSFGAYAGVGTRHETAAENGVSHFLEHMAFKGTERRSAAAIAEAIEDVGGHINA YTSREQTAYYVKLLKEDLSLGIDIIGDILCHSTFDPAEFERERGVILQEIGQANDTPDDIVFDHFQLAAYPDQPMGWPTL GTEEIIRAIGPDALRRYMKAHYTPENLVIAASGNLEHARVVDLVAKHFADLPAATRAEPLPADYAGGEYRELRDLDQAHL VLGFPAVGYADPDFHAAMLLSTLLGGGMSSRLFQEIREKRGLVYSIYSFALPARDAGLFGIYAGTGEAEAAELVPVTLGE LAKVRQSVSEAELRRARAQVKAGLLMSLESTGSRCEQIARQWQIFGRIVPTAETVAKIDAVTVDDITNVATRIFRAKPTL AAIGPVGRVPQMPKIIERLAA
Sequences:
>Translated_421_residues MSDTVQVTKLDSGLTILTERMDRVETVSFGAYAGVGTRHETAAENGVSHFLEHMAFKGTERRSAAAIAEAIEDVGGHINA YTSREQTAYYVKLLKEDLSLGIDIIGDILCHSTFDPAEFERERGVILQEIGQANDTPDDIVFDHFQLAAYPDQPMGWPTL GTEEIIRAIGPDALRRYMKAHYTPENLVIAASGNLEHARVVDLVAKHFADLPAATRAEPLPADYAGGEYRELRDLDQAHL VLGFPAVGYADPDFHAAMLLSTLLGGGMSSRLFQEIREKRGLVYSIYSFALPARDAGLFGIYAGTGEAEAAELVPVTLGE LAKVRQSVSEAELRRARAQVKAGLLMSLESTGSRCEQIARQWQIFGRIVPTAETVAKIDAVTVDDITNVATRIFRAKPTL AAIGPVGRVPQMPKIIERLAA >Mature_420_residues SDTVQVTKLDSGLTILTERMDRVETVSFGAYAGVGTRHETAAENGVSHFLEHMAFKGTERRSAAAIAEAIEDVGGHINAY TSREQTAYYVKLLKEDLSLGIDIIGDILCHSTFDPAEFERERGVILQEIGQANDTPDDIVFDHFQLAAYPDQPMGWPTLG TEEIIRAIGPDALRRYMKAHYTPENLVIAASGNLEHARVVDLVAKHFADLPAATRAEPLPADYAGGEYRELRDLDQAHLV LGFPAVGYADPDFHAAMLLSTLLGGGMSSRLFQEIREKRGLVYSIYSFALPARDAGLFGIYAGTGEAEAAELVPVTLGEL AKVRQSVSEAELRRARAQVKAGLLMSLESTGSRCEQIARQWQIFGRIVPTAETVAKIDAVTVDDITNVATRIFRAKPTLA AIGPVGRVPQMPKIIERLAA
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=426, Percent_Identity=37.5586854460094, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI46593007, Length=427, Percent_Identity=31.3817330210773, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI24308013, Length=454, Percent_Identity=26.8722466960352, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI50592988, Length=421, Percent_Identity=25.8907363420428, Blast_Score=129, Evalue=5e-30, Organism=Escherichia coli, GI1787770, Length=218, Percent_Identity=26.1467889908257, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71999683, Length=418, Percent_Identity=31.5789473684211, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17553678, Length=426, Percent_Identity=27.9342723004695, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17510601, Length=453, Percent_Identity=25.3863134657837, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17569737, Length=411, Percent_Identity=24.8175182481752, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17555260, Length=415, Percent_Identity=19.5180722891566, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323192, Length=434, Percent_Identity=33.4101382488479, Blast_Score=252, Evalue=8e-68, Organism=Saccharomyces cerevisiae, GI6321813, Length=430, Percent_Identity=28.1395348837209, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319426, Length=424, Percent_Identity=24.5283018867925, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI21357875, Length=422, Percent_Identity=35.3080568720379, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI24646943, Length=422, Percent_Identity=35.3080568720379, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI19921772, Length=449, Percent_Identity=27.6169265033408, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI24667786, Length=190, Percent_Identity=25.2631578947368, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641429, Length=211, Percent_Identity=24.1706161137441, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 45848; Mature: 45716
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTVQVTKLDSGLTILTERMDRVETVSFGAYAGVGTRHETAAENGVSHFLEHMAFKGTE CCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC RRSAAAIAEAIEDVGGHINAYTSREQTAYYVKLLKEDLSLGIDIIGDILCHSTFDPAEFE HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHH RERGVILQEIGQANDTPDDIVFDHFQLAAYPDQPMGWPTLGTEEIIRAIGPDALRRYMKA HHCCHHHHHHCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCHHHHHHHHHH HYTPENLVIAASGNLEHARVVDLVAKHFADLPAATRAEPLPADYAGGEYRELRDLDQAHL CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHE VLGFPAVGYADPDFHAAMLLSTLLGGGMSSRLFQEIREKRGLVYSIYSFALPARDAGLFG EEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHCCCCCCCEEE IYAGTGEAEAAELVPVTLGELAKVRQSVSEAELRRARAQVKAGLLMSLESTGSRCEQIAR EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QWQIFGRIVPTAETVAKIDAVTVDDITNVATRIFRAKPTLAAIGPVGRVPQMPKIIERLA HHHHHHHHCCCHHHHHHHHCEEHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHC A C >Mature Secondary Structure SDTVQVTKLDSGLTILTERMDRVETVSFGAYAGVGTRHETAAENGVSHFLEHMAFKGTE CCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC RRSAAAIAEAIEDVGGHINAYTSREQTAYYVKLLKEDLSLGIDIIGDILCHSTFDPAEFE HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHH RERGVILQEIGQANDTPDDIVFDHFQLAAYPDQPMGWPTLGTEEIIRAIGPDALRRYMKA HHCCHHHHHHCCCCCCCHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCHHHHHHHHHH HYTPENLVIAASGNLEHARVVDLVAKHFADLPAATRAEPLPADYAGGEYRELRDLDQAHL CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHE VLGFPAVGYADPDFHAAMLLSTLLGGGMSSRLFQEIREKRGLVYSIYSFALPARDAGLFG EEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHCCCCCCCEEE IYAGTGEAEAAELVPVTLGELAKVRQSVSEAELRRARAQVKAGLLMSLESTGSRCEQIAR EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QWQIFGRIVPTAETVAKIDAVTVDDITNVATRIFRAKPTLAAIGPVGRVPQMPKIIERLA HHHHHHHHCCCHHHHHHHHCEEHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA