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The map label for this gene is lsrB [H]

Identifier: 148260599

GI number: 148260599

Start: 1768299

End: 1769336

Strand: Reverse

Name: lsrB [H]

Synonym: Acry_1601

Alternate gene names: 148260599

Gene position: 1769336-1768299 (Counterclockwise)

Preceding gene: 148260600

Following gene: 148260598

Centisome position: 52.2

GC content: 65.7

Gene sequence:

>1038_bases
ATGACCAGAAACACGCTCATCCGCGCCGGGCGGCGCGACATTCTCAAACTCGCCGGCGCGGGGGCGGCGGCGGGGCTCGC
GATGCCCGCGATCGCCCGCGCGAACAAGCGCTACACGATCGCGGTGGTGCCGAAATCGCTCGACAATCCGGTGTTCTACA
CGGCGCATTACGGGGCGATGCAGCGGGCGAAGGAGCTTGGCGATGTCGACCTGATCTGGACCGCCTCGGCCTCGTCGGAT
GCGAGCCAGGAAGCGGAGATCGTGCAGAACCTGATCACGCGGCATGTCGATGGCATGGCGATCGACGCCAACGCGCCGCA
GCCGCTGATCGCCCCGGTCAACGAGGCGGTGGAGAAGGGCATCGTCACCATCACCTGGGATTCGGACGTGCCGGGCAGCA
AGCGGCAGGTCTATTACGGGGTGGACAATACCAAGATGGGCGTCTCGATGGGCGAGCAGGCGCTGAAATTCATGGGCACC
AAGGGCAAGGTGATCCTGATTTCCGGCGGGCCGGGGGCGACCAACCTGAACGCGCGGCTGGCCGGCGTGAAGCAGGTGAT
GGGCAAGCACAAGGGGATCGAGTTCCTCGGCCCGTATTTCGACAATGACGACCTGACCAAGGCGCAGGAGCTGATCGACA
ACGTGCTGACCGCGCATCCCGACGCGGGCGCGATCGTCGATGTCGCGGCGGTGGCGTTCTTCGGCAAGCTCTCGGCCATG
CCCAAGCTGATCGCCAACCGCGGCAAGGTGAAGATCATCGGCTCGGACGTGCTGGCGCCGGAGATTCCGCTGGTCGAGAA
GGGCTACGTGCAGGCGCTGGTCGGCCAGGATTACTGGGGCTGGGGGTATCAGACCGTCACCATCATCCACAACATGCTGA
CCAACAAGAAGTGCCATTATCCGACGCTGGTGCCGCAGGCGATGCCGGTGGTGACGAAGGCGAACGCGGCGCACTGGGTG
AAGCTGTGGGACGAGGCGAAGACGCCGGCCGGGGCGGCGAAGGCGTTCCGGGAGGCGCCGATCGGCTGCATGGGCTGA

Upstream 100 bases:

>100_bases
GGGCTCGTGATCGTCGCCGCCGCGGCGATCGACATCCTGCGCAGGAGGCTCGAACGCGTGCGCATCGCCTGAAACCGAAC
AAAGACAGGAGGATAACGCC

Downstream 100 bases:

>100_bases
GGCGATGGCCGAGCCGATCCTGAGCCTGCACGGCATCGCCAAGCATTACGGCCCGGTGCGGGCGCTCGACGCGGTGGATT
TCGAGGTCGCGGCCGGCGAG

Product: ABC-type sugar transport system periplasmic component-like protein

Products: NA

Alternate protein names: AI-2-binding protein lsrB [H]

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MTRNTLIRAGRRDILKLAGAGAAAGLAMPAIARANKRYTIAVVPKSLDNPVFYTAHYGAMQRAKELGDVDLIWTASASSD
ASQEAEIVQNLITRHVDGMAIDANAPQPLIAPVNEAVEKGIVTITWDSDVPGSKRQVYYGVDNTKMGVSMGEQALKFMGT
KGKVILISGGPGATNLNARLAGVKQVMGKHKGIEFLGPYFDNDDLTKAQELIDNVLTAHPDAGAIVDVAAVAFFGKLSAM
PKLIANRGKVKIIGSDVLAPEIPLVEKGYVQALVGQDYWGWGYQTVTIIHNMLTNKKCHYPTLVPQAMPVVTKANAAHWV
KLWDEAKTPAGAAKAFREAPIGCMG

Sequences:

>Translated_345_residues
MTRNTLIRAGRRDILKLAGAGAAAGLAMPAIARANKRYTIAVVPKSLDNPVFYTAHYGAMQRAKELGDVDLIWTASASSD
ASQEAEIVQNLITRHVDGMAIDANAPQPLIAPVNEAVEKGIVTITWDSDVPGSKRQVYYGVDNTKMGVSMGEQALKFMGT
KGKVILISGGPGATNLNARLAGVKQVMGKHKGIEFLGPYFDNDDLTKAQELIDNVLTAHPDAGAIVDVAAVAFFGKLSAM
PKLIANRGKVKIIGSDVLAPEIPLVEKGYVQALVGQDYWGWGYQTVTIIHNMLTNKKCHYPTLVPQAMPVVTKANAAHWV
KLWDEAKTPAGAAKAFREAPIGCMG
>Mature_344_residues
TRNTLIRAGRRDILKLAGAGAAAGLAMPAIARANKRYTIAVVPKSLDNPVFYTAHYGAMQRAKELGDVDLIWTASASSDA
SQEAEIVQNLITRHVDGMAIDANAPQPLIAPVNEAVEKGIVTITWDSDVPGSKRQVYYGVDNTKMGVSMGEQALKFMGTK
GKVILISGGPGATNLNARLAGVKQVMGKHKGIEFLGPYFDNDDLTKAQELIDNVLTAHPDAGAIVDVAAVAFFGKLSAMP
KLIANRGKVKIIGSDVLAPEIPLVEKGYVQALVGQDYWGWGYQTVTIIHNMLTNKKCHYPTLVPQAMPVVTKANAAHWVK
LWDEAKTPAGAAKAFREAPIGCMG

Specific function: Part of the ABC transporter complex lsrABCD involved in autoinducer 2 (AI-2) import. Binds AI-2 and delivers it to the lsrC and lsrD permeases [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787795, Length=237, Percent_Identity=26.5822784810127, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790526, Length=266, Percent_Identity=25.5639097744361, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1790192, Length=288, Percent_Identity=27.4305555555556, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36872; Mature: 36741

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNTLIRAGRRDILKLAGAGAAAGLAMPAIARANKRYTIAVVPKSLDNPVFYTAHYGAM
CCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEHHHHH
QRAKELGDVDLIWTASASSDASQEAEIVQNLITRHVDGMAIDANAPQPLIAPVNEAVEKG
HHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCC
IVTITWDSDVPGSKRQVYYGVDNTKMGVSMGEQALKFMGTKGKVILISGGPGATNLNARL
EEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH
AGVKQVMGKHKGIEFLGPYFDNDDLTKAQELIDNVLTAHPDAGAIVDVAAVAFFGKLSAM
HHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
PKLIANRGKVKIIGSDVLAPEIPLVEKGYVQALVGQDYWGWGYQTVTIIHNMLTNKKCHY
HHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
PTLVPQAMPVVTKANAAHWVKLWDEAKTPAGAAKAFREAPIGCMG
CCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TRNTLIRAGRRDILKLAGAGAAAGLAMPAIARANKRYTIAVVPKSLDNPVFYTAHYGAM
CCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEHHHHH
QRAKELGDVDLIWTASASSDASQEAEIVQNLITRHVDGMAIDANAPQPLIAPVNEAVEKG
HHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCC
IVTITWDSDVPGSKRQVYYGVDNTKMGVSMGEQALKFMGTKGKVILISGGPGATNLNARL
EEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH
AGVKQVMGKHKGIEFLGPYFDNDDLTKAQELIDNVLTAHPDAGAIVDVAAVAFFGKLSAM
HHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
PKLIANRGKVKIIGSDVLAPEIPLVEKGYVQALVGQDYWGWGYQTVTIIHNMLTNKKCHY
HHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC
PTLVPQAMPVVTKANAAHWVKLWDEAKTPAGAAKAFREAPIGCMG
CCCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA