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The map label for this gene is rbsC [H]

Identifier: 148260600

GI number: 148260600

Start: 1769365

End: 1770414

Strand: Reverse

Name: rbsC [H]

Synonym: Acry_1602

Alternate gene names: 148260600

Gene position: 1770414-1769365 (Counterclockwise)

Preceding gene: 148260602

Following gene: 148260599

Centisome position: 52.24

GC content: 70.19

Gene sequence:

>1050_bases
ATGGGGGAGCGACTGCGGGGCCGGGAACCGGCGCCAGACACGTCCGGCATCGGTCCGGCATCGCCAGCTCCGAGCCTGGC
GCGGCGGGGGATCGACATCCTGCTCCTGCCCTGGGTGAGCGTGCTGATCGCGCTGGTCGCGATTTCGGCGCTGCTGAGTT
TGGCGACGCCGTATTTCTTCACCGAAGACAACATCATCGGCACCGTCGCGGTCTATTTCTCGTGGATCTGCATCGCCGGG
TTCGGCGAGGCGCTGGTGATGATCGGCGGCGGGCTCGACCTTTCGGTGGGCTCGACCATGGGGCTGGCCGGCATGATCTC
GGCCATGGTGCTGGCGGCGGGCGGCAACCTTGCGCTGGCGCTGCTGGCGGGGCTCGCGACCGGGGCGGCGGTGGGGCTGG
CCAACGGGCTGGTGATCACCCGCATCGGGCTCAACCCGTTCATCACCACGCTCGGCTCGCTCAGCGTGGTGCGGGGGCTG
GCCTTCGGGATCGGCCAGGGGATGGCGGTGACGGCGCCGAGCGATGCGGCGGGCAACGCCTTCTCGGCGCTCGGCACCGG
CACGGCGCTCGGCATTCCGGTGCCGGTGCTGGTGATGCTCGGCTTCGGCGTGATCGTCCATGTCGTGCTGACCGGCACGC
CGTTCGGCCGGCATGTCTACGGGCTTGGCGGCAACGAGCAGGCCTCGCGCCTGCTGGGGCTGAACGTCGACCGGCTGAAG
ATCCGGCTCTACGTGATTTCCGGCGTGCTCGCCGCGATCGGCGGGATGCTGCTGACCGCGAAATCGGGCACGGCGCTGCC
GGATGCCGCCACCGGCTACGAACTCAAGGTGATCGCCGCGGTGATCATCGGCGGCACCAGCCTCGCCGGCGGGCGGGGCA
CGATTCCGGGCGTGCTGATCGGTGCGGCGCTGCTCGGCGTGATCAATGACGGCATCGTCCTGCTCGGGCTGGCCGGCTAC
TGGCAGCAGCTGATCACCGGGCTCGTGATCGTCGCCGCCGCGGCGATCGACATCCTGCGCAGGAGGCTCGAACGCGTGCG
CATCGCCTGA

Upstream 100 bases:

>100_bases
AAGGCAGTGCGGCGCTCGATTGTTTGACTTGACAGACGGAAAGCCGCGCCGATAGGCTCATTTTTATAAGTTAACGAACA
CCCGAAACGGGAATCTGCTC

Downstream 100 bases:

>100_bases
AACCGAACAAAGACAGGAGGATAACGCCATGACCAGAAACACGCTCATCCGCGCCGGGCGGCGCGACATTCTCAAACTCG
CCGGCGCGGGGGCGGCGGCG

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MGERLRGREPAPDTSGIGPASPAPSLARRGIDILLLPWVSVLIALVAISALLSLATPYFFTEDNIIGTVAVYFSWICIAG
FGEALVMIGGGLDLSVGSTMGLAGMISAMVLAAGGNLALALLAGLATGAAVGLANGLVITRIGLNPFITTLGSLSVVRGL
AFGIGQGMAVTAPSDAAGNAFSALGTGTALGIPVPVLVMLGFGVIVHVVLTGTPFGRHVYGLGGNEQASRLLGLNVDRLK
IRLYVISGVLAAIGGMLLTAKSGTALPDAATGYELKVIAAVIIGGTSLAGGRGTIPGVLIGAALLGVINDGIVLLGLAGY
WQQLITGLVIVAAAAIDILRRRLERVRIA

Sequences:

>Translated_349_residues
MGERLRGREPAPDTSGIGPASPAPSLARRGIDILLLPWVSVLIALVAISALLSLATPYFFTEDNIIGTVAVYFSWICIAG
FGEALVMIGGGLDLSVGSTMGLAGMISAMVLAAGGNLALALLAGLATGAAVGLANGLVITRIGLNPFITTLGSLSVVRGL
AFGIGQGMAVTAPSDAAGNAFSALGTGTALGIPVPVLVMLGFGVIVHVVLTGTPFGRHVYGLGGNEQASRLLGLNVDRLK
IRLYVISGVLAAIGGMLLTAKSGTALPDAATGYELKVIAAVIIGGTSLAGGRGTIPGVLIGAALLGVINDGIVLLGLAGY
WQQLITGLVIVAAAAIDILRRRLERVRIA
>Mature_348_residues
GERLRGREPAPDTSGIGPASPAPSLARRGIDILLLPWVSVLIALVAISALLSLATPYFFTEDNIIGTVAVYFSWICIAGF
GEALVMIGGGLDLSVGSTMGLAGMISAMVLAAGGNLALALLAGLATGAAVGLANGLVITRIGLNPFITTLGSLSVVRGLA
FGIGQGMAVTAPSDAAGNAFSALGTGTALGIPVPVLVMLGFGVIVHVVLTGTPFGRHVYGLGGNEQASRLLGLNVDRLKI
RLYVISGVLAAIGGMLLTAKSGTALPDAATGYELKVIAAVIIGGTSLAGGRGTIPGVLIGAALLGVINDGIVLLGLAGYW
QQLITGLVIVAAAAIDILRRRLERVRIA

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=300, Percent_Identity=39, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI145693152, Length=264, Percent_Identity=36.7424242424242, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1790524, Length=291, Percent_Identity=37.4570446735395, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1788896, Length=301, Percent_Identity=35.2159468438538, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1788471, Length=287, Percent_Identity=34.4947735191638, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1789992, Length=132, Percent_Identity=38.6363636363636, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI87082395, Length=285, Percent_Identity=30.8771929824561, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1787793, Length=288, Percent_Identity=31.5972222222222, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI145693214, Length=249, Percent_Identity=32.5301204819277, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1787794, Length=280, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35002; Mature: 34871

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERLRGREPAPDTSGIGPASPAPSLARRGIDILLLPWVSVLIALVAISALLSLATPYFF
CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEE
TEDNIIGTVAVYFSWICIAGFGEALVMIGGGLDLSVGSTMGLAGMISAMVLAAGGNLALA
ECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHHCCCHHHHH
LLAGLATGAAVGLANGLVITRIGLNPFITTLGSLSVVRGLAFGIGQGMAVTAPSDAAGNA
HHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCH
FSALGTGTALGIPVPVLVMLGFGVIVHVVLTGTPFGRHVYGLGGNEQASRLLGLNVDRLK
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCHHHHE
IRLYVISGVLAAIGGMLLTAKSGTALPDAATGYELKVIAAVIIGGTSLAGGRGTIPGVLI
EEHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHH
GAALLGVINDGIVLLGLAGYWQQLITGLVIVAAAAIDILRRRLERVRIA
HHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GERLRGREPAPDTSGIGPASPAPSLARRGIDILLLPWVSVLIALVAISALLSLATPYFF
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEE
TEDNIIGTVAVYFSWICIAGFGEALVMIGGGLDLSVGSTMGLAGMISAMVLAAGGNLALA
ECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCHHHHHHHHHHHHHHCCCHHHHH
LLAGLATGAAVGLANGLVITRIGLNPFITTLGSLSVVRGLAFGIGQGMAVTAPSDAAGNA
HHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCH
FSALGTGTALGIPVPVLVMLGFGVIVHVVLTGTPFGRHVYGLGGNEQASRLLGLNVDRLK
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCHHHHE
IRLYVISGVLAAIGGMLLTAKSGTALPDAATGYELKVIAAVIIGGTSLAGGRGTIPGVLI
EEHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHH
GAALLGVINDGIVLLGLAGYWQQLITGLVIVAAAAIDILRRRLERVRIA
HHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]