| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148260404
Identifier: 148260404
GI number: 148260404
Start: 1557743
End: 1558291
Strand: Reverse
Name: 148260404
Synonym: Acry_1402
Alternate gene names: NA
Gene position: 1558291-1557743 (Counterclockwise)
Preceding gene: 148260405
Following gene: 148260393
Centisome position: 45.98
GC content: 66.85
Gene sequence:
>549_bases ATGGACCAGGTCGAAAGCGCAGCGCCGAACGCGTTCCTGAGGGATGTGCGCGCCATCTCGGCGCGGATGCACGGCGCGCT GCTCGATGAGGAGTCGGAGGGCGCCGATCCCGCGCTCGTTCTCCTGCAAAGCGCGCTCACGGCCGAAATCCTCTGCGTCT GGCGCTACACCATGATGTCGGTCTCGCTCGCCGGGCTGAAACAGCCGCGCATCGGCGCCGAGTTCCAGGAACAGGCGAAT GACGAGCGCCGCCACATGGTCGCCATCGCGCAGCGCATCCGCGAACTCGGCGGCACGCCGGATTTCTCCCCGCACGGGCT CGAAACCCGCTTCGGCGAATTCGGCACCAGGGCGGATCTCGCCGGCCTCGTCGAACAGAACCTCGCCGCCGAGCGCGAGG TGATCGGCCTCTACCGCCGGATGATCGACCATTTCGAGCCGCACGACCCGGTCACCGCGCTGATGCTCACCAACATCCTC GAAGAGGAAAGCGAGCACGCGACCGATATGCAGGACCTGCTTTCGATCGAGACCGGCGGCCACGGCTGA
Upstream 100 bases:
>100_bases ACTTGCGCGCGGCCGCCGTGGCGCGCGTTGAGTTGGCGTCCCGATTCTGTCATCATAAGGGCGCCATATCGAAGCGGCGA TCAGCGGAGTGGACAGCGTG
Downstream 100 bases:
>100_bases AACGCCTGCCGCGCCGTCGCCGAACCGCTACCCCAGCAGGCCGATCAGCCCGTGCAACAGCGCGGCCGGCGTCGGCGGGC AGCCCGGAATCGTGAGCGTG
Product: Ferritin, Dps family protein
Products: NA
Alternate protein names: Bacterioferritin; Ferritin And Dps; Ferritin-Like Domain Subfamily; Bacterioferritin-Like Domain-Containing Protein; Rubrerythrin Family Protein; RubrerythrinFerritin And Dps
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MDQVESAAPNAFLRDVRAISARMHGALLDEESEGADPALVLLQSALTAEILCVWRYTMMSVSLAGLKQPRIGAEFQEQAN DERRHMVAIAQRIRELGGTPDFSPHGLETRFGEFGTRADLAGLVEQNLAAEREVIGLYRRMIDHFEPHDPVTALMLTNIL EEESEHATDMQDLLSIETGGHG
Sequences:
>Translated_182_residues MDQVESAAPNAFLRDVRAISARMHGALLDEESEGADPALVLLQSALTAEILCVWRYTMMSVSLAGLKQPRIGAEFQEQAN DERRHMVAIAQRIRELGGTPDFSPHGLETRFGEFGTRADLAGLVEQNLAAEREVIGLYRRMIDHFEPHDPVTALMLTNIL EEESEHATDMQDLLSIETGGHG >Mature_182_residues MDQVESAAPNAFLRDVRAISARMHGALLDEESEGADPALVLLQSALTAEILCVWRYTMMSVSLAGLKQPRIGAEFQEQAN DERRHMVAIAQRIRELGGTPDFSPHGLETRFGEFGTRADLAGLVEQNLAAEREVIGLYRRMIDHFEPHDPVTALMLTNIL EEESEHATDMQDLLSIETGGHG
Specific function: Unknown
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20123; Mature: 20123
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQVESAAPNAFLRDVRAISARMHGALLDEESEGADPALVLLQSALTAEILCVWRYTMMS CCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VSLAGLKQPRIGAEFQEQANDERRHMVAIAQRIRELGGTPDFSPHGLETRFGEFGTRADL HHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHH AGLVEQNLAAEREVIGLYRRMIDHFEPHDPVTALMLTNILEEESEHATDMQDLLSIETGG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HG CC >Mature Secondary Structure MDQVESAAPNAFLRDVRAISARMHGALLDEESEGADPALVLLQSALTAEILCVWRYTMMS CCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VSLAGLKQPRIGAEFQEQANDERRHMVAIAQRIRELGGTPDFSPHGLETRFGEFGTRADL HHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHH AGLVEQNLAAEREVIGLYRRMIDHFEPHDPVTALMLTNILEEESEHATDMQDLLSIETGG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA