| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260393
Identifier: 148260393
GI number: 148260393
Start: 1543781
End: 1545088
Strand: Reverse
Name: 148260393
Synonym: Acry_1390
Alternate gene names: NA
Gene position: 1545088-1543781 (Counterclockwise)
Preceding gene: 148260404
Following gene: 148260392
Centisome position: 45.59
GC content: 66.97
Gene sequence:
>1308_bases ATGGCAGAGATTGTGGTCCTTGGGGCGGGGCTTGGCGGCACGCTCGCCGCGTTCGAAACCGCGGGACAGATCCGGCCGGA AGACAGGATCACGCTGATCGGCGAGCGGAACACGTTCCAGTTCACCCCGTCCAACCCCTGGGTCGCCGTCGGCTGGCGCG AGCGCGCCGACATCGAGGTCTCGCTCGACAAGGTGACGCGCCGCAAGAACATCATCTTCCGCACCGAGGGCGCCGCCCGC GTGCATCCGGCCGAAAACCGCGTCGAGCTCAATGGCGGCGAGAGCATTCCCTACGATTATCTCATCATCGCCACCGGCCC CGAACTCGCCTTCGACGAGATTCCCGGCTGCGGCCCCGGGCAGAACACCGTCTCGATCTGCCAGACCGACCACGCCGCCG CCGCTTTCGAGGCGTTCGAGCGCTTCTGCGCCAATCCGGGGCCGGTCGTCGTCGGCGCGGTGCAGGGCGCGTCCTGCTTC GGCCCGGCCTACGAATTCGCCTTCATCCTCGATCGCGAACTGCGCAAGCGACGCCTGCGCAGCAAGGTGCCGATGACCTT CGTCACCTCCGAACCCTATATCGGCCATCTCGGGCTCGATGGCGTGGGCGACACCAAGTCGCTGATGGAGAGCGAGCTGC GCCACCGCCACATCAAATGGATCACCAACGCGAAGATCGCCGCGGTGGATGCCGAAAAGGTGGTGGCCGAGGAAGTCGGC GCGGACGGCCAGACGATCGCAACCCACGAGCTGCCCAGCCGCTTCACCATGTTCCTGCCCGCCTTTCGCGGCGTGCCGGC GCTGCGCGGCATCGAGGGGCTGGTCAATCCGCGCGGCTTCGTGCTGATCGACGAGCACCAGCGCAACCAGACCTATCCGA ACGTCTTCAGCGTCGGCGTCTGCGTCGCGATCCCGCCGGTGGGCAAGACGCCGGTGCCGGTCGGCGTGCCGAAGACAGGT TTCATGATCGAATCGATGGTCACCGCCACCGCCCACAATATCGGCGCGCTGCTGCGCGGCGAGGCGCCGCACGCGCGGGC GACGTGGAACGCCGTCTGCCTTGCCGATTTCGGCGATGGCGGCGTGGCCTTCGTCGCCCAGCCGCAGATCCCGCCGCGCG ACGTCAACTGGGCCTCGACCGGCGCCTGGGTGCATCTCGCGAAAGTCGCCTTCGAGAAGTATTTCCTCCGCAAGATCCGC GCCGGCGAGAGCGAGCCCTTCTACGAGCGGTTCCTGATGAAGCAGCTCAACATCACGAAGATTCACCACAACGACCGCAA GCCGGCGAAAGGCGCGGGCCATGGCTGA
Upstream 100 bases:
>100_bases GTTGATCCAGGTCAAGCCGGCGTCGCCGCAAACCAATTAACATCCCTCCGGGCGCGGCGGAGCGCCGCCTTCGCCGGAGC GCTCGGAAAGGCAGGAAAGC
Downstream 100 bases:
>100_bases CGCAACCCATCTCGTCTGTCCGCATTGCGGCGCGGTGAACCGCATCCCGCCGGCGCGCCCGGCGCAGGCCGCGCAATGCG GCGCCTGCCACCGCAAGCTG
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Quinone Reductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Sulfide-Quinone Oxidoreductase
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MAEIVVLGAGLGGTLAAFETAGQIRPEDRITLIGERNTFQFTPSNPWVAVGWRERADIEVSLDKVTRRKNIIFRTEGAAR VHPAENRVELNGGESIPYDYLIIATGPELAFDEIPGCGPGQNTVSICQTDHAAAAFEAFERFCANPGPVVVGAVQGASCF GPAYEFAFILDRELRKRRLRSKVPMTFVTSEPYIGHLGLDGVGDTKSLMESELRHRHIKWITNAKIAAVDAEKVVAEEVG ADGQTIATHELPSRFTMFLPAFRGVPALRGIEGLVNPRGFVLIDEHQRNQTYPNVFSVGVCVAIPPVGKTPVPVGVPKTG FMIESMVTATAHNIGALLRGEAPHARATWNAVCLADFGDGGVAFVAQPQIPPRDVNWASTGAWVHLAKVAFEKYFLRKIR AGESEPFYERFLMKQLNITKIHHNDRKPAKGAGHG
Sequences:
>Translated_435_residues MAEIVVLGAGLGGTLAAFETAGQIRPEDRITLIGERNTFQFTPSNPWVAVGWRERADIEVSLDKVTRRKNIIFRTEGAAR VHPAENRVELNGGESIPYDYLIIATGPELAFDEIPGCGPGQNTVSICQTDHAAAAFEAFERFCANPGPVVVGAVQGASCF GPAYEFAFILDRELRKRRLRSKVPMTFVTSEPYIGHLGLDGVGDTKSLMESELRHRHIKWITNAKIAAVDAEKVVAEEVG ADGQTIATHELPSRFTMFLPAFRGVPALRGIEGLVNPRGFVLIDEHQRNQTYPNVFSVGVCVAIPPVGKTPVPVGVPKTG FMIESMVTATAHNIGALLRGEAPHARATWNAVCLADFGDGGVAFVAQPQIPPRDVNWASTGAWVHLAKVAFEKYFLRKIR AGESEPFYERFLMKQLNITKIHHNDRKPAKGAGHG >Mature_434_residues AEIVVLGAGLGGTLAAFETAGQIRPEDRITLIGERNTFQFTPSNPWVAVGWRERADIEVSLDKVTRRKNIIFRTEGAARV HPAENRVELNGGESIPYDYLIIATGPELAFDEIPGCGPGQNTVSICQTDHAAAAFEAFERFCANPGPVVVGAVQGASCFG PAYEFAFILDRELRKRRLRSKVPMTFVTSEPYIGHLGLDGVGDTKSLMESELRHRHIKWITNAKIAAVDAEKVVAEEVGA DGQTIATHELPSRFTMFLPAFRGVPALRGIEGLVNPRGFVLIDEHQRNQTYPNVFSVGVCVAIPPVGKTPVPVGVPKTGF MIESMVTATAHNIGALLRGEAPHARATWNAVCLADFGDGGVAFVAQPQIPPRDVNWASTGAWVHLAKVAFEKYFLRKIRA GESEPFYERFLMKQLNITKIHHNDRKPAKGAGHG
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI115534373, Length=311, Percent_Identity=25.4019292604502, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17539680, Length=376, Percent_Identity=22.6063829787234, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24657386, Length=277, Percent_Identity=25.2707581227437, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24657391, Length=277, Percent_Identity=25.2707581227437, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47394; Mature: 47263
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIVVLGAGLGGTLAAFETAGQIRPEDRITLIGERNTFQFTPSNPWVAVGWRERADIEV CCEEEEEECCCCCHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCEEEECCCCCCCEEE SLDKVTRRKNIIFRTEGAARVHPAENRVELNGGESIPYDYLIIATGPELAFDEIPGCGPG EHHHHHHCCCEEEEECCCCEECCCCCEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCCC QNTVSICQTDHAAAAFEAFERFCANPGPVVVGAVQGASCFGPAYEFAFILDRELRKRRLR CCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH SKVPMTFVTSEPYIGHLGLDGVGDTKSLMESELRHRHIKWITNAKIAAVDAEKVVAEEVG HCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHEEEECCCEEEEECHHHHHHHHHC ADGQTIATHELPSRFTMFLPAFRGVPALRGIEGLVNPRGFVLIDEHQRNQTYPNVFSVGV CCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCEECCE CVAIPPVGKTPVPVGVPKTGFMIESMVTATAHNIGALLRGEAPHARATWNAVCLADFGDG EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCC GVAFVAQPQIPPRDVNWASTGAWVHLAKVAFEKYFLRKIRAGESEPFYERFLMKQLNITK CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEE IHHNDRKPAKGAGHG EECCCCCCCCCCCCC >Mature Secondary Structure AEIVVLGAGLGGTLAAFETAGQIRPEDRITLIGERNTFQFTPSNPWVAVGWRERADIEV CEEEEEECCCCCHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCCEEEECCCCCCCEEE SLDKVTRRKNIIFRTEGAARVHPAENRVELNGGESIPYDYLIIATGPELAFDEIPGCGPG EHHHHHHCCCEEEEECCCCEECCCCCEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCCC QNTVSICQTDHAAAAFEAFERFCANPGPVVVGAVQGASCFGPAYEFAFILDRELRKRRLR CCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH SKVPMTFVTSEPYIGHLGLDGVGDTKSLMESELRHRHIKWITNAKIAAVDAEKVVAEEVG HCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHEEEECCCEEEEECHHHHHHHHHC ADGQTIATHELPSRFTMFLPAFRGVPALRGIEGLVNPRGFVLIDEHQRNQTYPNVFSVGV CCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCEECCE CVAIPPVGKTPVPVGVPKTGFMIESMVTATAHNIGALLRGEAPHARATWNAVCLADFGDG EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCC GVAFVAQPQIPPRDVNWASTGAWVHLAKVAFEKYFLRKIRAGESEPFYERFLMKQLNITK CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEE IHHNDRKPAKGAGHG EECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA