| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is trxC [H]
Identifier: 148260392
GI number: 148260392
Start: 1543342
End: 1543788
Strand: Reverse
Name: trxC [H]
Synonym: Acry_1389
Alternate gene names: 148260392
Gene position: 1543788-1543342 (Counterclockwise)
Preceding gene: 148260393
Following gene: 148260391
Centisome position: 45.55
GC content: 72.48
Gene sequence:
>447_bases ATGGCTGACGCAACCCATCTCGTCTGTCCGCATTGCGGCGCGGTGAACCGCATCCCGCCGGCGCGCCCGGCGCAGGCCGC GCAATGCGGCGCCTGCCACCGCAAGCTGTTCGACGGCCATCCCGTCGAGGTCGACCAGGCCGGCTTCGAGCGCCACGCCG AGCGGGACGGGATTCCCCTCCTGCTCGATGTCTGGGCGCCCTGGTGCGGACCGTGCCGGATGATGGCGCCGCAATTCGAG CAGGCGGCCACCATCCTCGAACCGGAGGTCCGGCTGCTCAAGCTCAATGCCGACGAGGCGCCGGAGATCTCCGCCCGCCT CGGCGTGCGCGGCATCCCGGCGCTGTTCCTGCTCAGGGGCGGTCGGGTCATCGGCCAGAGCGCCGGGGCCATGAGCGCTC AGGCGATCGTCGATTTCGCGCGCCGCCACCTCGCGGCGGCGGCGTGA
Upstream 100 bases:
>100_bases GCCGGCGAGAGCGAGCCCTTCTACGAGCGGTTCCTGATGAAGCAGCTCAACATCACGAAGATTCACCACAACGACCGCAA GCCGGCGAAAGGCGCGGGCC
Downstream 100 bases:
>100_bases TGTTCAGAGCATCATCCGATCAGATGGAGTTATCTGATCGGATAAAGATGCTCAGGTTATCAATATGATGGAGCACGACA TCCGATCCAGCAGGATCGGA
Product: thioredoxin domain-containing protein
Products: NA
Alternate protein names: Trx-2; Protein-disulfide reductase [H]
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MADATHLVCPHCGAVNRIPPARPAQAAQCGACHRKLFDGHPVEVDQAGFERHAERDGIPLLLDVWAPWCGPCRMMAPQFE QAATILEPEVRLLKLNADEAPEISARLGVRGIPALFLLRGGRVIGQSAGAMSAQAIVDFARRHLAAAA
Sequences:
>Translated_148_residues MADATHLVCPHCGAVNRIPPARPAQAAQCGACHRKLFDGHPVEVDQAGFERHAERDGIPLLLDVWAPWCGPCRMMAPQFE QAATILEPEVRLLKLNADEAPEISARLGVRGIPALFLLRGGRVIGQSAGAMSAQAIVDFARRHLAAAA >Mature_147_residues ADATHLVCPHCGAVNRIPPARPAQAAQCGACHRKLFDGHPVEVDQAGFERHAERDGIPLLLDVWAPWCGPCRMMAPQFEQ AATILEPEVRLLKLNADEAPEISARLGVRGIPALFLLRGGRVIGQSAGAMSAQAIVDFARRHLAAAA
Specific function: Efficient electron donor for the essential enzyme ribonucleotide reductase. Is also able to reduce the interchain disulfide bridges of insulin [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788936, Length=126, Percent_Identity=40.4761904761905, Blast_Score=116, Evalue=5e-28, Organism=Escherichia coli, GI87082331, Length=86, Percent_Identity=38.3720930232558, Blast_Score=78, Evalue=2e-16, Organism=Caenorhabditis elegans, GI212646193, Length=111, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: =1.8.1.8 [H]
Molecular weight: Translated: 15845; Mature: 15713
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: PS00194 THIOREDOXIN ; PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADATHLVCPHCGAVNRIPPARPAQAAQCGACHRKLFDGHPVEVDQAGFERHAERDGIPL CCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCE LLDVWAPWCGPCRMMAPQFEQAATILEPEVRLLKLNADEAPEISARLGVRGIPALFLLRG EEECCCCCCCCHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCHHHHHHHC GRVIGQSAGAMSAQAIVDFARRHLAAAA CEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADATHLVCPHCGAVNRIPPARPAQAAQCGACHRKLFDGHPVEVDQAGFERHAERDGIPL CCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCE LLDVWAPWCGPCRMMAPQFEQAATILEPEVRLLKLNADEAPEISARLGVRGIPALFLLRG EEECCCCCCCCHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCCCHHHHHHHC GRVIGQSAGAMSAQAIVDFARRHLAAAA CEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]