| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is yqeB [C]
Identifier: 148260157
GI number: 148260157
Start: 1283652
End: 1284524
Strand: Reverse
Name: yqeB [C]
Synonym: Acry_1153
Alternate gene names: 148260157
Gene position: 1284524-1283652 (Counterclockwise)
Preceding gene: 148260158
Following gene: 148260156
Centisome position: 37.9
GC content: 70.22
Gene sequence:
>873_bases GTGAGTGCGGTTGTACAACCTCCACGCGGCGTGATCGTCGAGCTGCGGCGCGTTCGTGGCTCGGCGCCCCGCGAGCAGGG CACGCGCATGATGGTGACGGCGCACGCGACCGACGGCACGATCGGTGGCGGCGCCCTGGAACACGCGGCGATCGCGCGCG CCCGCGCGCTGCTCGGCGAATGGATCGCCCATCCCGATCTTGCCCGCGAAATGCACGAGCTTCACGCGCTCGGCCCGCAG CTTGGCCAGTGCTGCGGAGGCTCCGTCACCCTCGCCTATGCGCCGTCGGACTCGGGAAAGCTCGAAGCCCCGCCGCCCAT GTTTCATCTGCAACTGCACGGGGCCGGTCATGTCGGCCGTGCCGTGGTCGCGGTTCTCGCGACTCTCGGCTGCACGATCG ACTGGATCGACTCCCGCACGGACGCATTTCCCGCCAGCCTCCCCGGCGGCAAGGCACAACTCGCCTGCCGCAGGCTGGCC GATCCGGTCGCCGCCATCGCGGATGCGCCGCCGGGTGCCGCGTTCCTGATCATGACCCATGCCCACCCGCTCGACGCGGC ACTGTGCGCCGCGGTCATGCGGCGCGGCGATTTCGGCTATCTCGGCCTGATCGGTTCGGAAACCAAGCGCGCGCGCTTCA CCCGCCAGTGGCGCCGGCAGGACATCCCGCCCGCGGCGATCGCGCGCCTGTGCTGCCCGATCGGGATTCCCGCGATCCAG GGCAAGCAGCCGGAACTCATCGCTCTCGCCGTCGCCGCGGAACTGGCATCGCGGTTTCCGGCGCGGAACATGCGCCAGAT TCCGCGCATCCCGATTGATCTCGACGCTGAGTGCAGCGCCTGTCGTGCCTCGGCGCGCTGCACCGGATCATAA
Upstream 100 bases:
>100_bases CCGCCGGCGGCCACCGCGTCGATCCGCCGCTGCGCGCACCGGCGACGCCGGAGGCGATCCTCGACGCGCTCGATGTCGTC CGCGCCGGCGGTGACGCACC
Downstream 100 bases:
>100_bases GCGGGGAATTATATCGACAATTTCGGATCGCGGGCGCGGCAGCGGGCTGCCACCATCGCCCGCGCATGAGAGGAAACGGA CCGGATCGATGACTGACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Accessory Protein; Adenosine Deaminase; XdhC Protein; Xanthine And CO Dehydrogenases Maturation Factor; Xanthine Dehydrogenase; Dehydrogenase; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Xdh C Protein; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSAVVQPPRGVIVELRRVRGSAPREQGTRMMVTAHATDGTIGGGALEHAAIARARALLGEWIAHPDLAREMHELHALGPQ LGQCCGGSVTLAYAPSDSGKLEAPPPMFHLQLHGAGHVGRAVVAVLATLGCTIDWIDSRTDAFPASLPGGKAQLACRRLA DPVAAIADAPPGAAFLIMTHAHPLDAALCAAVMRRGDFGYLGLIGSETKRARFTRQWRRQDIPPAAIARLCCPIGIPAIQ GKQPELIALAVAAELASRFPARNMRQIPRIPIDLDAECSACRASARCTGS
Sequences:
>Translated_290_residues MSAVVQPPRGVIVELRRVRGSAPREQGTRMMVTAHATDGTIGGGALEHAAIARARALLGEWIAHPDLAREMHELHALGPQ LGQCCGGSVTLAYAPSDSGKLEAPPPMFHLQLHGAGHVGRAVVAVLATLGCTIDWIDSRTDAFPASLPGGKAQLACRRLA DPVAAIADAPPGAAFLIMTHAHPLDAALCAAVMRRGDFGYLGLIGSETKRARFTRQWRRQDIPPAAIARLCCPIGIPAIQ GKQPELIALAVAAELASRFPARNMRQIPRIPIDLDAECSACRASARCTGS >Mature_289_residues SAVVQPPRGVIVELRRVRGSAPREQGTRMMVTAHATDGTIGGGALEHAAIARARALLGEWIAHPDLAREMHELHALGPQL GQCCGGSVTLAYAPSDSGKLEAPPPMFHLQLHGAGHVGRAVVAVLATLGCTIDWIDSRTDAFPASLPGGKAQLACRRLAD PVAAIADAPPGAAFLIMTHAHPLDAALCAAVMRRGDFGYLGLIGSETKRARFTRQWRRQDIPPAAIARLCCPIGIPAIQG KQPELIALAVAAELASRFPARNMRQIPRIPIDLDAECSACRASARCTGS
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789240, Length=241, Percent_Identity=29.4605809128631, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30546; Mature: 30415
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVVQPPRGVIVELRRVRGSAPREQGTRMMVTAHATDGTIGGGALEHAAIARARALLGE CCCCCCCCHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH WIAHPDLAREMHELHALGPQLGQCCGGSVTLAYAPSDSGKLEAPPPMFHLQLHGAGHVGR HHCCHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCHHH AVVAVLATLGCTIDWIDSRTDAFPASLPGGKAQLACRRLADPVAAIADAPPGAAFLIMTH HHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC AHPLDAALCAAVMRRGDFGYLGLIGSETKRARFTRQWRRQDIPPAAIARLCCPIGIPAIQ CCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC GKQPELIALAVAAELASRFPARNMRQIPRIPIDLDAECSACRASARCTGS CCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure SAVVQPPRGVIVELRRVRGSAPREQGTRMMVTAHATDGTIGGGALEHAAIARARALLGE CCCCCCCHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH WIAHPDLAREMHELHALGPQLGQCCGGSVTLAYAPSDSGKLEAPPPMFHLQLHGAGHVGR HHCCHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCHHH AVVAVLATLGCTIDWIDSRTDAFPASLPGGKAQLACRRLADPVAAIADAPPGAAFLIMTH HHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC AHPLDAALCAAVMRRGDFGYLGLIGSETKRARFTRQWRRQDIPPAAIARLCCPIGIPAIQ CCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC GKQPELIALAVAAELASRFPARNMRQIPRIPIDLDAECSACRASARCTGS CCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA