| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260026
Identifier: 148260026
GI number: 148260026
Start: 1129329
End: 1130018
Strand: Reverse
Name: 148260026
Synonym: Acry_1017
Alternate gene names: NA
Gene position: 1130018-1129329 (Counterclockwise)
Preceding gene: 148260030
Following gene: 148260016
Centisome position: 33.34
GC content: 70.0
Gene sequence:
>690_bases ATGGACACGATTTATCGCGGCGACCTGTCGACCCCGGCGGGGCGGCGCAATGCCTGGATCGACGCGCTGTTCGTCGACCA TGCCGTGCTGCGGCTGGGCTGGACCAATTTCGCTCCGGTGAAGCCGGGCGCGCTGTATCGATCGAACCATCCGGTGCCGT TCCAGCTGGCGAAATTCCGCCGGCTGGTCGGGATCAACACGCTGATCAACCTGCGCGGCGAGTGCCGCAACGGCTCGGAC GCGCTCTCGCGCGAGGCGGCGCGGCGGCTCGGGCTCGATTTCTACGACATGGCGCTGGAATCGCGCGGCGCGCCGCATCG CGACCGCATCCTGCGGCTGGCCGAGATCATCCGCACGATGCGGCGGCCGGCGCTGGTGCACTGCAAGTCCGGCGCCGACC GGGCGGGGATCGCGAGTGCGTTGTTCGTGCTGATCGAGGGCGGCAGCGTGGCGGAGGCGCGGCGGCAGCTCAGCCTGCGC TTTGGCCATATACGGCAGTCGAACACCGGGATCCTGGACGCCTTCCTCGACATGTACGAGGAGGAGGGCGGCGGGATGGC GTTTCTGGACTGGGTGCGCGACGCCTATCGCGAGCAGGCGCTGCGCGAGCGCTACGCGCGCGAGACGCGCAACCGGCCAG GCCGGCGGATCGCGCGGTTCGTCAACGACCGGCTGCTCGCCCGGGAGTGA
Upstream 100 bases:
>100_bases CCGGCGAAGCGCGAGGTGGCGCAGGCGGCGAGCAGCAGCGGCGCCGCGAGGGCGGGCAGGGCGAGTCGCATGGGCAGAGA ATACCTGCTAGTCAGCCGGC
Downstream 100 bases:
>100_bases CCGGGCGGCGGCGCGGGCAGGGGCGGGCGGTCAGGCCTCCGGCGGGGCGGCGCTGATCGGGATTTCGCGGGCTTCGGTCG GCGGCTGTTCGCCGAGACCG
Product: protein tyrosine/serine phosphatase
Products: NA
Alternate protein names: Tyrosine/Serine Protein Phosphatase; Tyrosine/Serine Phosphatase
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MDTIYRGDLSTPAGRRNAWIDALFVDHAVLRLGWTNFAPVKPGALYRSNHPVPFQLAKFRRLVGINTLINLRGECRNGSD ALSREAARRLGLDFYDMALESRGAPHRDRILRLAEIIRTMRRPALVHCKSGADRAGIASALFVLIEGGSVAEARRQLSLR FGHIRQSNTGILDAFLDMYEEEGGGMAFLDWVRDAYREQALRERYARETRNRPGRRIARFVNDRLLARE
Sequences:
>Translated_229_residues MDTIYRGDLSTPAGRRNAWIDALFVDHAVLRLGWTNFAPVKPGALYRSNHPVPFQLAKFRRLVGINTLINLRGECRNGSD ALSREAARRLGLDFYDMALESRGAPHRDRILRLAEIIRTMRRPALVHCKSGADRAGIASALFVLIEGGSVAEARRQLSLR FGHIRQSNTGILDAFLDMYEEEGGGMAFLDWVRDAYREQALRERYARETRNRPGRRIARFVNDRLLARE >Mature_229_residues MDTIYRGDLSTPAGRRNAWIDALFVDHAVLRLGWTNFAPVKPGALYRSNHPVPFQLAKFRRLVGINTLINLRGECRNGSD ALSREAARRLGLDFYDMALESRGAPHRDRILRLAEIIRTMRRPALVHCKSGADRAGIASALFVLIEGGSVAEARRQLSLR FGHIRQSNTGILDAFLDMYEEEGGGMAFLDWVRDAYREQALRERYARETRNRPGRRIARFVNDRLLARE
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26062; Mature: 26062
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIYRGDLSTPAGRRNAWIDALFVDHAVLRLGWTNFAPVKPGALYRSNHPVPFQLAKFR CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCHHHHHHH RLVGINTLINLRGECRNGSDALSREAARRLGLDFYDMALESRGAPHRDRILRLAEIIRTM HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH RRPALVHCKSGADRAGIASALFVLIEGGSVAEARRQLSLRFGHIRQSNTGILDAFLDMYE CCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EEGGGMAFLDWVRDAYREQALRERYARETRNRPGRRIARFVNDRLLARE HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTIYRGDLSTPAGRRNAWIDALFVDHAVLRLGWTNFAPVKPGALYRSNHPVPFQLAKFR CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCHHHHHHH RLVGINTLINLRGECRNGSDALSREAARRLGLDFYDMALESRGAPHRDRILRLAEIIRTM HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH RRPALVHCKSGADRAGIASALFVLIEGGSVAEARRQLSLRFGHIRQSNTGILDAFLDMYE CCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EEGGGMAFLDWVRDAYREQALRERYARETRNRPGRRIARFVNDRLLARE HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA