| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is exoC [H]
Identifier: 148260030
GI number: 148260030
Start: 1133229
End: 1134647
Strand: Reverse
Name: exoC [H]
Synonym: Acry_1021
Alternate gene names: 148260030
Gene position: 1134647-1133229 (Counterclockwise)
Preceding gene: 148260031
Following gene: 148260026
Centisome position: 33.48
GC content: 68.85
Gene sequence:
>1419_bases ATGCATGACAAGACCGGTTTCTCGCATCAATTCCCCGCCAGCACGCTGCGCGAATACGATATTCGCGGCATCGTCGGCGA AACGCTGCACGAGACGGACGCCTTCGCGATCGGGCGAACCTTCGGCTCGATGGTCGCGCGCAAGGGCGGCAGCCGGGTGA TCGTGGGCCGCGACGGGCGGCTCTCCTCGCCGGCGATGGCGCGGGCGGTGATCGCGGGACTGGTCGCCAGCGGCATGCAG GTGACCGATATCGGCTGCGGGCCGACGCCGATGCTGTATTACGCGGCGACCGTCGCCGAGGCCGATGGCGCGGTGATGGT GACCGGCAGTCACAACCCCTCGAACTACAACGGCTTCAAGATGATGCTCGGGCGCAAGCCGTTCTTCGGCGCGCAGATCC AGGAGCTCGGGCGGCTGGCGACGGCGGGGAATGTGGAGCCGGAAGGCGAGGGTTCGGTCGAGGAAAAGGATGTCAGCGAC GCCTATCTGGCCCGGCTGCTGGAGGACTGGGAAGGCGGCGACCGGATGCTCAACGTGGTGTGGGATACCGGCAATGGCGC CGCCGGCGAGATCGTCGCGCGGCTGGTGCAGGCGCTGCCGGGGCGGCACATGGTGCTGAACGCCGAGATCGACGGGCGGT TCCCGGCGCATCATCCGGACCCGACGGTGCCGAAGAACCTCGAGCAGCTGGTGGCCGCGGTGAAGAAGCAGGGGGCGGAT ATCGGCATCGCCTTCGACGGCGACGCCGACCGGATCGGCATCGTCGACGATACCGGCGAGATCCTGTTCGGCGACCAGTT CCTCGTGCTGCTGGCGCGCGACGTGCTGGCGGCGCATCCGGGGGCGATGATCATCGCCGATGTGAAGGCGAGCCAGGTGC TGTTCGACCAGATCGCCGCCGCGGGCGGCACGCCGCTGATGTGGAAGACCGGGCATTCGCTGATCAAGTCGAAGATGGCG GAGACCGGCGCGCCGCTGGCGGGCGAGATGTCCGGCCACATTTTCTTCGCCGACAAGTGGTACGGGTTCGACGACGCGAT CTATGCCGCGATCCGCGTGCTGAACGCGGTGAACCGGAGCGGCGAGAGCGTTTCCGCCTTCCGCAAGAGCCTGCCGCAGG TGATCAACACGCCGGAGCTGCGCTTCGACTGCGCGGAGGACCGGAAATTCGAGGTGGTGGCCGAGGTGGCCGAGCGGCTG CGGGCGGATGGCGCCACCGTGTCGGAGACCGACGGGGTGCGGGTGACGACCGAGGACGGGTGGTGGCTGCTGCGGGCCTC GAACACCCAGGCCGTGCTGGTGGCGCGGGCGGAGGCGGGGTCGGCCGAGGGGCTGGCGCGGCTGAAGCAGATCCTCGCCT CGCAGCTCGCGGCCTCGGGCCTCGCGCCGGATTTCTCCGGGGCGAACTCAGGGCATTAA
Upstream 100 bases:
>100_bases TGCGGCGACAAGGCGGGCTATCTGGAAGCGCAGATTGCCTTCGGTCTGGTGCGTCCGGACCTGGGGCCGTCGATCCGTCA CTTCCTGAAGGCTTATTCCG
Downstream 100 bases:
>100_bases GTCACTGAATTTCAAAGATTGATGATCCGCCCCCGGCCGGAACCGGGGGCGGTTTCCGTTCAGCGCGCGGGCAGCAGGCC GACGAGGCGCTCGGCTTCGG
Product: phosphomannomutase
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MHDKTGFSHQFPASTLREYDIRGIVGETLHETDAFAIGRTFGSMVARKGGSRVIVGRDGRLSSPAMARAVIAGLVASGMQ VTDIGCGPTPMLYYAATVAEADGAVMVTGSHNPSNYNGFKMMLGRKPFFGAQIQELGRLATAGNVEPEGEGSVEEKDVSD AYLARLLEDWEGGDRMLNVVWDTGNGAAGEIVARLVQALPGRHMVLNAEIDGRFPAHHPDPTVPKNLEQLVAAVKKQGAD IGIAFDGDADRIGIVDDTGEILFGDQFLVLLARDVLAAHPGAMIIADVKASQVLFDQIAAAGGTPLMWKTGHSLIKSKMA ETGAPLAGEMSGHIFFADKWYGFDDAIYAAIRVLNAVNRSGESVSAFRKSLPQVINTPELRFDCAEDRKFEVVAEVAERL RADGATVSETDGVRVTTEDGWWLLRASNTQAVLVARAEAGSAEGLARLKQILASQLAASGLAPDFSGANSGH
Sequences:
>Translated_472_residues MHDKTGFSHQFPASTLREYDIRGIVGETLHETDAFAIGRTFGSMVARKGGSRVIVGRDGRLSSPAMARAVIAGLVASGMQ VTDIGCGPTPMLYYAATVAEADGAVMVTGSHNPSNYNGFKMMLGRKPFFGAQIQELGRLATAGNVEPEGEGSVEEKDVSD AYLARLLEDWEGGDRMLNVVWDTGNGAAGEIVARLVQALPGRHMVLNAEIDGRFPAHHPDPTVPKNLEQLVAAVKKQGAD IGIAFDGDADRIGIVDDTGEILFGDQFLVLLARDVLAAHPGAMIIADVKASQVLFDQIAAAGGTPLMWKTGHSLIKSKMA ETGAPLAGEMSGHIFFADKWYGFDDAIYAAIRVLNAVNRSGESVSAFRKSLPQVINTPELRFDCAEDRKFEVVAEVAERL RADGATVSETDGVRVTTEDGWWLLRASNTQAVLVARAEAGSAEGLARLKQILASQLAASGLAPDFSGANSGH >Mature_472_residues MHDKTGFSHQFPASTLREYDIRGIVGETLHETDAFAIGRTFGSMVARKGGSRVIVGRDGRLSSPAMARAVIAGLVASGMQ VTDIGCGPTPMLYYAATVAEADGAVMVTGSHNPSNYNGFKMMLGRKPFFGAQIQELGRLATAGNVEPEGEGSVEEKDVSD AYLARLLEDWEGGDRMLNVVWDTGNGAAGEIVARLVQALPGRHMVLNAEIDGRFPAHHPDPTVPKNLEQLVAAVKKQGAD IGIAFDGDADRIGIVDDTGEILFGDQFLVLLARDVLAAHPGAMIIADVKASQVLFDQIAAAGGTPLMWKTGHSLIKSKMA ETGAPLAGEMSGHIFFADKWYGFDDAIYAAIRVLNAVNRSGESVSAFRKSLPQVINTPELRFDCAEDRKFEVVAEVAERL RADGATVSETDGVRVTTEDGWWLLRASNTQAVLVARAEAGSAEGLARLKQILASQLAASGLAPDFSGANSGH
Specific function: Involved In The Biosynthesis Of The Capsular Polysaccharide Colanic Acid. [C]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=442, Percent_Identity=34.1628959276018, Blast_Score=213, Evalue=3e-56, Organism=Escherichia coli, GI1789566, Length=441, Percent_Identity=28.1179138321995, Blast_Score=96, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 50118; Mature: 50118
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDKTGFSHQFPASTLREYDIRGIVGETLHETDAFAIGRTFGSMVARKGGSRVIVGRDGR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC LSSPAMARAVIAGLVASGMQVTDIGCGPTPMLYYAATVAEADGAVMVTGSHNPSNYNGFK CCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHEEEEHCCCCCEEEEECCCCCCCCCCEE MMLGRKPFFGAQIQELGRLATAGNVEPEGEGSVEEKDVSDAYLARLLEDWEGGDRMLNVV EEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE WDTGNGAAGEIVARLVQALPGRHMVLNAEIDGRFPAHHPDPTVPKNLEQLVAAVKKQGAD EECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCE IGIAFDGDADRIGIVDDTGEILFGDQFLVLLARDVLAAHPGAMIIADVKASQVLFDQIAA EEEEECCCCCEEEEEECCCCEEECCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHH AGGTPLMWKTGHSLIKSKMAETGAPLAGEMSGHIFFADKWYGFDDAIYAAIRVLNAVNRS CCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC GESVSAFRKSLPQVINTPELRFDCAEDRKFEVVAEVAERLRADGATVSETDGVRVTTEDG CCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC WWLLRASNTQAVLVARAEAGSAEGLARLKQILASQLAASGLAPDFSGANSGH EEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MHDKTGFSHQFPASTLREYDIRGIVGETLHETDAFAIGRTFGSMVARKGGSRVIVGRDGR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC LSSPAMARAVIAGLVASGMQVTDIGCGPTPMLYYAATVAEADGAVMVTGSHNPSNYNGFK CCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHEEEEHCCCCCEEEEECCCCCCCCCCEE MMLGRKPFFGAQIQELGRLATAGNVEPEGEGSVEEKDVSDAYLARLLEDWEGGDRMLNVV EEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE WDTGNGAAGEIVARLVQALPGRHMVLNAEIDGRFPAHHPDPTVPKNLEQLVAAVKKQGAD EECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCE IGIAFDGDADRIGIVDDTGEILFGDQFLVLLARDVLAAHPGAMIIADVKASQVLFDQIAA EEEEECCCCCEEEEEECCCCEEECCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHH AGGTPLMWKTGHSLIKSKMAETGAPLAGEMSGHIFFADKWYGFDDAIYAAIRVLNAVNRS CCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC GESVSAFRKSLPQVINTPELRFDCAEDRKFEVVAEVAERLRADGATVSETDGVRVTTEDG CCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC WWLLRASNTQAVLVARAEAGSAEGLARLKQILASQLAASGLAPDFSGANSGH EEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA