| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is ubiG [H]
Identifier: 148260016
GI number: 148260016
Start: 1117476
End: 1118225
Strand: Reverse
Name: ubiG [H]
Synonym: Acry_1007
Alternate gene names: 148260016
Gene position: 1118225-1117476 (Counterclockwise)
Preceding gene: 148260026
Following gene: 148260014
Centisome position: 32.99
GC content: 73.07
Gene sequence:
>750_bases ATGCGGGCGGAAGAGGACGTGAGCATGGATGACGGGCAGGGCGCCGGACGGGCGGACGCGGCGGAGGTGCGGAAATTCGA CGCGCTGGCGGCGCGCTGGTGGGACCGGCACGGGCCGATGCGCGCGCTGCACGCGATGAATCCGGCGCGCAGCCGGTGGA TCCTCGACCATGTCGCCGCGGCGCGCGGCGGCGCGGCGGGGGTGGCGGTGCTCGATGTCGGCTGCGGCGCGGGGCTGCTG GCGGAAAGCCTGACCCGCGCCGGATGCAGGGTGACGGCGATCGACGCCGCGGGCGAGGCGATCGCCGCGGCGCGGGCGCA TGCCGAGGCGCAGGGACTCGGGATCGACTACCGCGCGACCACGGCGGACGCGCTGGCCGAAGCCGGCGCGCGGTTCGACG TGGTGACGGCGCTGGAGGTGATCGAGCACGTGCCGGACCCGCAGGGGTTTCTCGACACGCTGGCGGGGCTGCTGAAGCCG GGCGGGTTGCTGTTCATCTCAACACTGAACAGAACGCCGCAATCGATTGTTTTTGCAAAATACGCGGCGGAGTATGTGCT GGGCCTGGCGCCGCCCGGCACGCATGACTGGCGGAAATTCGTCACGCCGGGGGAGCTGGCCGCGATGTGCCGCGCCGCCG GGCTGCGGCTGGCGGCGACGGCGGGGATGGTGCCGGCGCCGCTGGCGGGCGGATTCCGCATCGCCCGGGATACGCGGATC AACTACATCGCGATGGCGGTGGCGGGCTGA
Upstream 100 bases:
>100_bases CATGTGATCCGATCTTGCCGTGAAACTGGTATCGACGCGGGAGCGGCGCTTGCTGCCGTCTCCCGGCAGGCTCACATAGC GAGCGGCAGGGAGAAGGGCA
Downstream 100 bases:
>100_bases GGCCGGCCGCTTCGGAGTCGCGGCAGGCGGCGAGCAGCCAGTCGCGGAAGGCGGCGAGGCCGGGCGGGCGGCGGGCCGGG TTTTCCAGCAGGTAATAGCC
Product: ubiquinone biosynthesis O-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MRAEEDVSMDDGQGAGRADAAEVRKFDALAARWWDRHGPMRALHAMNPARSRWILDHVAAARGGAAGVAVLDVGCGAGLL AESLTRAGCRVTAIDAAGEAIAAARAHAEAQGLGIDYRATTADALAEAGARFDVVTALEVIEHVPDPQGFLDTLAGLLKP GGLLFISTLNRTPQSIVFAKYAAEYVLGLAPPGTHDWRKFVTPGELAAMCRAAGLRLAATAGMVPAPLAGGFRIARDTRI NYIAMAVAG
Sequences:
>Translated_249_residues MRAEEDVSMDDGQGAGRADAAEVRKFDALAARWWDRHGPMRALHAMNPARSRWILDHVAAARGGAAGVAVLDVGCGAGLL AESLTRAGCRVTAIDAAGEAIAAARAHAEAQGLGIDYRATTADALAEAGARFDVVTALEVIEHVPDPQGFLDTLAGLLKP GGLLFISTLNRTPQSIVFAKYAAEYVLGLAPPGTHDWRKFVTPGELAAMCRAAGLRLAATAGMVPAPLAGGFRIARDTRI NYIAMAVAG >Mature_249_residues MRAEEDVSMDDGQGAGRADAAEVRKFDALAARWWDRHGPMRALHAMNPARSRWILDHVAAARGGAAGVAVLDVGCGAGLL AESLTRAGCRVTAIDAAGEAIAAARAHAEAQGLGIDYRATTADALAEAGARFDVVTALEVIEHVPDPQGFLDTLAGLLKP GGLLFISTLNRTPQSIVFAKYAAEYVLGLAPPGTHDWRKFVTPGELAAMCRAAGLRLAATAGMVPAPLAGGFRIARDTRI NYIAMAVAG
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=240, Percent_Identity=37.9166666666667, Blast_Score=169, Evalue=2e-42, Organism=Escherichia coli, GI1788564, Length=228, Percent_Identity=40.7894736842105, Blast_Score=188, Evalue=4e-49, Organism=Caenorhabditis elegans, GI115533050, Length=241, Percent_Identity=39.0041493775934, Blast_Score=161, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6324476, Length=260, Percent_Identity=29.2307692307692, Blast_Score=108, Evalue=1e-24, Organism=Drosophila melanogaster, GI281365311, Length=242, Percent_Identity=33.4710743801653, Blast_Score=131, Evalue=3e-31, Organism=Drosophila melanogaster, GI24585589, Length=198, Percent_Identity=38.3838383838384, Blast_Score=129, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 25893; Mature: 25893
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAEEDVSMDDGQGAGRADAAEVRKFDALAARWWDRHGPMRALHAMNPARSRWILDHVAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH ARGGAAGVAVLDVGCGAGLLAESLTRAGCRVTAIDAAGEAIAAARAHAEAQGLGIDYRAT HCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC TADALAEAGARFDVVTALEVIEHVPDPQGFLDTLAGLLKPGGLLFISTLNRTPQSIVFAK HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH YAAEYVLGLAPPGTHDWRKFVTPGELAAMCRAAGLRLAATAGMVPAPLAGGFRIARDTRI HHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHCCCEEHHCCCCCCCCCCCEEEECCCCE NYIAMAVAG EEEEEEECC >Mature Secondary Structure MRAEEDVSMDDGQGAGRADAAEVRKFDALAARWWDRHGPMRALHAMNPARSRWILDHVAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH ARGGAAGVAVLDVGCGAGLLAESLTRAGCRVTAIDAAGEAIAAARAHAEAQGLGIDYRAT HCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC TADALAEAGARFDVVTALEVIEHVPDPQGFLDTLAGLLKPGGLLFISTLNRTPQSIVFAK HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH YAAEYVLGLAPPGTHDWRKFVTPGELAAMCRAAGLRLAATAGMVPAPLAGGFRIARDTRI HHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHCCCEEHHCCCCCCCCCCCEEEECCCCE NYIAMAVAG EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA