| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is otsA [H]
Identifier: 148259876
GI number: 148259876
Start: 956019
End: 957392
Strand: Reverse
Name: otsA [H]
Synonym: Acry_0865
Alternate gene names: 148259876
Gene position: 957392-956019 (Counterclockwise)
Preceding gene: 148259877
Following gene: 148259869
Centisome position: 28.25
GC content: 69.87
Gene sequence:
>1374_bases ATGGGGCGGCTCGTCGTCGTTTCGAACCGGGTGTCGCTGCCGACCGACAAGGGCGCGAGGGCCGGCGGGCTGGCCGTGGC GCTGGAGGACGCGATGATCCCCGGCTCGCTCTGGTTCGGCTGGTCGGGCCGGCGGGGCGGTGCGAATTCGGACCGGGCGA GCGTGAGCGAACATCAGGGCATCACCTATGCGACGGTGGATCTCGGCGAGACGGATTATCGCCGCTTCTATGTCGGCTTC TCGAACGGCGCGCTGTGGCCGCTGCTGCATTACCGGACCGGGCTGATCGATTACCGGCGGGACGATTACGAGGGGTATGT CGCGGTGAACGACCTGTTCGCCGCCCGGCTGGCGCCGCTGCTGCAGCCCGATGACGTGATCTGGATCCATGACTACCAGC TCCTGACCCTGGCGGAGGCGCTGCGCCGGCTGGGGGTGAAGAACCGGATCGGGCTGTTCGTGCATATCCCGTTCGTGCCG CCGGCGGTGCTGCACGTGCTGCCGGAGGCGGAGCATCTGGTGCGGGCGATGGCGGCGGCCGATCTGGTCGGCTTCCAGAC GCATGGCGACCGGTTGAATTTCCTGGAATCGGCGGCGTCCTGCATGGAGATGCAGCGCGTGGGCGAGGACGGCTTCGTCC ATAACGGGCACCGCACCATGACGACGGTGACGCCGGTGGGCATCGATGTCGAGGGGTTCGCCCGGGCGGCGCGGCGGGCG GCGGGCATGACCGAGACGCGGCGGCTGATCTCCAGCCTGGTGGGGCGCGCGCTGGCGATCGGGGTGGACCGGCTGGACTA TACCAAGGGGCTGCCCCTTCGCTTCGCCGCCTTCGGCCGGCTGTTCCTGCGCCACCCCGAGCATCTGCGCCGGATCAGCC TGTTGCAGATCGCCGCGCGCTCGCGCGAGGATGTCGACCGGTACCAGTCGCTGCGGCGGGAGCTGGACCGGCAGGCGGGC GAGATCAACGGCGCCTATTCGGATTTCGACTGGACGCCCGTGCGCTACATGACGCGGGCGGTGAACCGCACCACGATCGC CGGATTCTACCGGATCGCCAGCATCGGGCTGGTCACGCCGCTGCGCGACGGCATGAACCTGGTGGCGAAGGAATACATCG CCGCGCAGGACCCGGCGGACCCCGGCGTGCTGGTGCTCTCGCGCTTCGCCGGGGCGGCGGAGGACCTGACCGAGGCGCTG ATCGTCAACCCGTATGACGCCGACCAGGTGGCGGATGCGATGCACACGGCGCTGCTGATGCCGCCGGAGGAGCGCGTCGC GCGGCATGCGGCGCTGCTGGCCAAGATCCGCGAGCGGACCGCCGCCTCATTCTGCCGGGCGTTCCTCGACCAGCTGCGCC AGGTCGAGCGCTGA
Upstream 100 bases:
>100_bases TGGGCGGGCACGGGCTGCACGTTCACCGCGATTTCGACGGCACGCCGGCCGCGGTGCTGGCCTGGCTGGGCAGCGCGCTG GCGCCGGGGAGGGTGTGAGG
Downstream 100 bases:
>100_bases GGCCGCCGCCGCCGCCCGGAAATGCGCCGGCAGGGCGGCGGTGACGGCGACCGGCGGGGCGAGCGGCAGGGCGAGCGCGC GGGCGAGCAGGCACATGCCG
Product: Alpha,alpha-trehalose-phosphate synthase
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MGRLVVVSNRVSLPTDKGARAGGLAVALEDAMIPGSLWFGWSGRRGGANSDRASVSEHQGITYATVDLGETDYRRFYVGF SNGALWPLLHYRTGLIDYRRDDYEGYVAVNDLFAARLAPLLQPDDVIWIHDYQLLTLAEALRRLGVKNRIGLFVHIPFVP PAVLHVLPEAEHLVRAMAAADLVGFQTHGDRLNFLESAASCMEMQRVGEDGFVHNGHRTMTTVTPVGIDVEGFARAARRA AGMTETRRLISSLVGRALAIGVDRLDYTKGLPLRFAAFGRLFLRHPEHLRRISLLQIAARSREDVDRYQSLRRELDRQAG EINGAYSDFDWTPVRYMTRAVNRTTIAGFYRIASIGLVTPLRDGMNLVAKEYIAAQDPADPGVLVLSRFAGAAEDLTEAL IVNPYDADQVADAMHTALLMPPEERVARHAALLAKIRERTAASFCRAFLDQLRQVER
Sequences:
>Translated_457_residues MGRLVVVSNRVSLPTDKGARAGGLAVALEDAMIPGSLWFGWSGRRGGANSDRASVSEHQGITYATVDLGETDYRRFYVGF SNGALWPLLHYRTGLIDYRRDDYEGYVAVNDLFAARLAPLLQPDDVIWIHDYQLLTLAEALRRLGVKNRIGLFVHIPFVP PAVLHVLPEAEHLVRAMAAADLVGFQTHGDRLNFLESAASCMEMQRVGEDGFVHNGHRTMTTVTPVGIDVEGFARAARRA AGMTETRRLISSLVGRALAIGVDRLDYTKGLPLRFAAFGRLFLRHPEHLRRISLLQIAARSREDVDRYQSLRRELDRQAG EINGAYSDFDWTPVRYMTRAVNRTTIAGFYRIASIGLVTPLRDGMNLVAKEYIAAQDPADPGVLVLSRFAGAAEDLTEAL IVNPYDADQVADAMHTALLMPPEERVARHAALLAKIRERTAASFCRAFLDQLRQVER >Mature_456_residues GRLVVVSNRVSLPTDKGARAGGLAVALEDAMIPGSLWFGWSGRRGGANSDRASVSEHQGITYATVDLGETDYRRFYVGFS NGALWPLLHYRTGLIDYRRDDYEGYVAVNDLFAARLAPLLQPDDVIWIHDYQLLTLAEALRRLGVKNRIGLFVHIPFVPP AVLHVLPEAEHLVRAMAAADLVGFQTHGDRLNFLESAASCMEMQRVGEDGFVHNGHRTMTTVTPVGIDVEGFARAARRAA GMTETRRLISSLVGRALAIGVDRLDYTKGLPLRFAAFGRLFLRHPEHLRRISLLQIAARSREDVDRYQSLRRELDRQAGE INGAYSDFDWTPVRYMTRAVNRTTIAGFYRIASIGLVTPLRDGMNLVAKEYIAAQDPADPGVLVLSRFAGAAEDLTEALI VNPYDADQVADAMHTALLMPPEERVARHAALLAKIRERTAASFCRAFLDQLRQVER
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=458, Percent_Identity=45.6331877729258, Blast_Score=387, Evalue=1e-109, Organism=Caenorhabditis elegans, GI115533560, Length=420, Percent_Identity=32.1428571428571, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI115533558, Length=420, Percent_Identity=32.1428571428571, Blast_Score=187, Evalue=7e-48, Organism=Caenorhabditis elegans, GI71987012, Length=422, Percent_Identity=31.2796208530806, Blast_Score=177, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6319602, Length=467, Percent_Identity=31.2633832976445, Blast_Score=265, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6323917, Length=457, Percent_Identity=25.164113785558, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6323537, Length=388, Percent_Identity=26.0309278350515, Blast_Score=154, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6320279, Length=396, Percent_Identity=22.2222222222222, Blast_Score=134, Evalue=2e-32, Organism=Drosophila melanogaster, GI19920676, Length=488, Percent_Identity=35.2459016393443, Blast_Score=291, Evalue=5e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 50763; Mature: 50632
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLVVVSNRVSLPTDKGARAGGLAVALEDAMIPGSLWFGWSGRRGGANSDRASVSEHQG CCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHCC ITYATVDLGETDYRRFYVGFSNGALWPLLHYRTGLIDYRRDDYEGYVAVNDLFAARLAPL CEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHC LQPDDVIWIHDYQLLTLAEALRRLGVKNRIGLFVHIPFVPPAVLHVLPEAEHLVRAMAAA CCCCCEEEEECHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHH DLVGFQTHGDRLNFLESAASCMEMQRVGEDGFVHNGHRTMTTVTPVGIDVEGFARAARRA HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHH AGMTETRRLISSLVGRALAIGVDRLDYTKGLPLRFAAFGRLFLRHPEHLRRISLLQIAAR CCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH SREDVDRYQSLRRELDRQAGEINGAYSDFDWTPVRYMTRAVNRTTIAGFYRIASIGLVTP CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRDGMNLVAKEYIAAQDPADPGVLVLSRFAGAAEDLTEALIVNPYDADQVADAMHTALLM HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHHHHCC PPEERVARHAALLAKIRERTAASFCRAFLDQLRQVER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GRLVVVSNRVSLPTDKGARAGGLAVALEDAMIPGSLWFGWSGRRGGANSDRASVSEHQG CCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHCC ITYATVDLGETDYRRFYVGFSNGALWPLLHYRTGLIDYRRDDYEGYVAVNDLFAARLAPL CEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHC LQPDDVIWIHDYQLLTLAEALRRLGVKNRIGLFVHIPFVPPAVLHVLPEAEHLVRAMAAA CCCCCEEEEECHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHH DLVGFQTHGDRLNFLESAASCMEMQRVGEDGFVHNGHRTMTTVTPVGIDVEGFARAARRA HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHH AGMTETRRLISSLVGRALAIGVDRLDYTKGLPLRFAAFGRLFLRHPEHLRRISLLQIAAR CCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH SREDVDRYQSLRRELDRQAGEINGAYSDFDWTPVRYMTRAVNRTTIAGFYRIASIGLVTP CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRDGMNLVAKEYIAAQDPADPGVLVLSRFAGAAEDLTEALIVNPYDADQVADAMHTALLM HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHEECCCCHHHHHHHHHHHHCC PPEERVARHAALLAKIRERTAASFCRAFLDQLRQVER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA