| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259869
Identifier: 148259869
GI number: 148259869
Start: 947091
End: 947924
Strand: Reverse
Name: 148259869
Synonym: Acry_0858
Alternate gene names: NA
Gene position: 947924-947091 (Counterclockwise)
Preceding gene: 148259876
Following gene: 148259866
Centisome position: 27.97
GC content: 67.99
Gene sequence:
>834_bases ATGGACGGCTCGATCCTTGGTCATCAACTCACCCGGACGACGAATTTCAATCATCTCCCGGCCCGCCGCTCTGACGGTGT GACGGCGCGGCTCGTTCTCGACGACGAGGGGTTTCGGGAAGCCCTCGCCGTGCGGTACGAGGCCTACGTCGCCGCGGGCT ATCTCGCGCCACGCCGCGACGCCCTGTTCTCTGATACTTATGACGAATCGCCGCTAAGCAAGACGCTGGTGCTCTACACC GACGGCGAGGCCGCGGCATCGGTGCGGGTGTGCATGCTCGGCCATCGCGACGGCAACGACCGGCCGGGCGATCTGCCCGC CGCGGCGATGTTCCGCACGGAGATCGACACCTGTCTCGCCGGCCTCGCGGCGGAGGGGCGTCCGGCCCGGGCGGTCGAGA TCACGCGGCTCGCGTGCAGCCCCCGGCACGCCAGGAACGTCGCCCTCCTGCTCGGTCTCTATCACGTCGCGGGCTACCTG ATCCTGCATTTCCACGCCGATATCATCTTCGCCGCCGTGACCGCCAATCACACCGGCTTCTACAGGCGGATGGGCTTCCG GGAGATGGCCCCGCCGCGCGACTATCCGGGGCTTGACGTGCAGACCGTGCTGATGGGCTGCAAGATCGGCGAGCATCGGG GGATTCCGGGCAAGACGCTGGCGCTCAGCGAGATGTCGCTCTCCGACGACACCTATCAGGGGCTGGTGACCGGCGAGACC GTGCCCGTGTTTGGCGGACACGCCACATCCCGCCCCGATCTCGTGGTCAACCGGATGGCCGGCGGCATGCGGATGCCGCA GACGGCCGGGACGATCGCCACGACGATCGGCTAG
Upstream 100 bases:
>100_bases GAAATTTTCCATTCATGGAACAAAGGAATCACCACTGATCTGTTAAGCAATCATATCGGATAAAGCATTGTTATCCGTTT GTTCTCAAAGGAGACCCCCT
Downstream 100 bases:
>100_bases GCTGACCGCTCACCGGCGCCGCGCGGCACAGGCCCGCGGCGCCGGTGTGGGGCTGATCAGAACGCGGACAGGCCGGTCTG GGCGCGGCCGAGGATCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MDGSILGHQLTRTTNFNHLPARRSDGVTARLVLDDEGFREALAVRYEAYVAAGYLAPRRDALFSDTYDESPLSKTLVLYT DGEAAASVRVCMLGHRDGNDRPGDLPAAAMFRTEIDTCLAGLAAEGRPARAVEITRLACSPRHARNVALLLGLYHVAGYL ILHFHADIIFAAVTANHTGFYRRMGFREMAPPRDYPGLDVQTVLMGCKIGEHRGIPGKTLALSEMSLSDDTYQGLVTGET VPVFGGHATSRPDLVVNRMAGGMRMPQTAGTIATTIG
Sequences:
>Translated_277_residues MDGSILGHQLTRTTNFNHLPARRSDGVTARLVLDDEGFREALAVRYEAYVAAGYLAPRRDALFSDTYDESPLSKTLVLYT DGEAAASVRVCMLGHRDGNDRPGDLPAAAMFRTEIDTCLAGLAAEGRPARAVEITRLACSPRHARNVALLLGLYHVAGYL ILHFHADIIFAAVTANHTGFYRRMGFREMAPPRDYPGLDVQTVLMGCKIGEHRGIPGKTLALSEMSLSDDTYQGLVTGET VPVFGGHATSRPDLVVNRMAGGMRMPQTAGTIATTIG >Mature_277_residues MDGSILGHQLTRTTNFNHLPARRSDGVTARLVLDDEGFREALAVRYEAYVAAGYLAPRRDALFSDTYDESPLSKTLVLYT DGEAAASVRVCMLGHRDGNDRPGDLPAAAMFRTEIDTCLAGLAAEGRPARAVEITRLACSPRHARNVALLLGLYHVAGYL ILHFHADIIFAAVTANHTGFYRRMGFREMAPPRDYPGLDVQTVLMGCKIGEHRGIPGKTLALSEMSLSDDTYQGLVTGET VPVFGGHATSRPDLVVNRMAGGMRMPQTAGTIATTIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29932; Mature: 29932
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGSILGHQLTRTTNFNHLPARRSDGVTARLVLDDEGFREALAVRYEAYVAAGYLAPRRD CCCCCCCHHHEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC ALFSDTYDESPLSKTLVLYTDGEAAASVRVCMLGHRDGNDRPGDLPAAAMFRTEIDTCLA CHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH GLAAEGRPARAVEITRLACSPRHARNVALLLGLYHVAGYLILHFHADIIFAAVTANHTGF HHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHH YRRMGFREMAPPRDYPGLDVQTVLMGCKIGEHRGIPGKTLALSEMSLSDDTYQGLVTGET HHHCCCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCE VPVFGGHATSRPDLVVNRMAGGMRMPQTAGTIATTIG EEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECC >Mature Secondary Structure MDGSILGHQLTRTTNFNHLPARRSDGVTARLVLDDEGFREALAVRYEAYVAAGYLAPRRD CCCCCCCHHHEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC ALFSDTYDESPLSKTLVLYTDGEAAASVRVCMLGHRDGNDRPGDLPAAAMFRTEIDTCLA CHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH GLAAEGRPARAVEITRLACSPRHARNVALLLGLYHVAGYLILHFHADIIFAAVTANHTGF HHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHH YRRMGFREMAPPRDYPGLDVQTVLMGCKIGEHRGIPGKTLALSEMSLSDDTYQGLVTGET HHHCCCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCE VPVFGGHATSRPDLVVNRMAGGMRMPQTAGTIATTIG EEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA