| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259822
Identifier: 148259822
GI number: 148259822
Start: 901806
End: 903236
Strand: Reverse
Name: 148259822
Synonym: Acry_0811
Alternate gene names: NA
Gene position: 903236-901806 (Counterclockwise)
Preceding gene: 148259823
Following gene: 148259821
Centisome position: 26.65
GC content: 45.0
Gene sequence:
>1431_bases GTGATGCATAACTCCCAATCTGGATCCAAATGCTCAATCGCAACGCTCCCAATTCGTGAGATATCTGGACGAGTTTTGCC AATAATTTGCTTCGATAGCGGACATATATTTGGTTCCGCATTGCATCATGCTCTTCAATTAGCAAGAACCCGATCGATAG CAACGATCACAAATACAACACGTTCGATTGTTCTTTTGCTGGATTTTTATATAAGCACTGACGCGGACAACTTAGCATCT GATGGTGATAGACAACGTTTTTTGACGACTTTTGCGCTAGCTTTACAGAACGGAACGAGCGTCCCAGACGGGATCGACCC GACCGGACTCAATTGGAAGCCACGTTCACTTAGGGAATCACGACGCGTTTGGCAAAATTGTGAAAAATTTCTAATCGAAT GTCGCCATTTCCCAAAAGGGCGCCACCCCATAGAAAACACTTGGCTGTTCACAACTGATTTGAGACTAAAAAAGTTGGCA CGAACAACTTCGAAAAGTCTATCATTATTTGCTCATCTAAAATTTGGCGAACAAAATGGTATTGATTGGATACCGCGTTA TTCTGGCATAGCAGCGAATCAGCGGCGGGCGATCGGATTTCCGACCGACAAAATTATGAAACTAATTACTACCACATTAG AAAATAACAGAGCAAGTAAGGCTGCTCGGCTCCGAGATGCACTAGCATTTATACTCCTAGCGTATGGCGGGATACGATCT AGTGAACTTTTTCATATATGGATCACGGATATAGTTTTGAACGACAGCGGTGCACGAGCATTTCTGCGCCATCCTTCGGA TTACACAGTAAAACGCGCTGGAATGACAATAACTCGAAGATCGGAATTATCAGACCGATACAACCTCATACCACGACATA TGATGGACCCATCTCATCCACTCCACGCTGGGTGGAAGGGAATAAGTTTTGACTATAATCACTCAGCGGTCGTGTATTGG ATACCTCCAGTTATAGGTAAAATATTTGCAAATTTGCACATGTTGTGGGTATCCAAATTTCGACCCGTGGCTCCAGATCA TCCGTATTATTTCACGTCGGTCGACATAGACGGCGATTTTGGCGGTCCTTGGACACGATCGGCGTTTCGCCGATCTTTCA AAGCGGCCTGTGCGCGGATTGGACTGCAGCTCGATCAGGCTAAAGGCATTTCCCCTCATGGCATGCGTCATGCGTACGGT ATTGCTGCGACAACGCTAGGTCTCAGTCAATCCGCTATCCAGCAGATGCTTCACCATCGTCATCCCCTAAGTCAAGAGGT ATATAAGCAGCAGTCATTTGACCAAGTAACGTCTCAAATACAGTATGCGTACGAGAACTTAAAATCAGAAACGTTAACGA CGCCAAATTTCGATAGTTTTTTTTGGAAATCAGACCCACAGCGCCTATTCAATACATGGAGGCATTCATGA
Upstream 100 bases:
>100_bases GCTGTGGTTCGCACTGTTTAGCTGGAGAAATCACCTATGCTAAATGTAATGAAGACCCAACGTCAGTCCACACAACCTGT TCTAAGTTATTTGTATTATC
Downstream 100 bases:
>100_bases AACCAGCTGAACCCAACGATTTAGTAGCTTACGGATCCGAAAAAAGCACGATGTTTAGTGTTATCGATTCATCATATAAA GGAACCGAATACAATTTATC
Product: phage integrase family protein
Products: NA
Alternate protein names: Phage Integrase; Integrase Family Protein; Site-Specific Recombinase; DNA Integration Protein; Phage Integrase Family Site Specific Recombinase
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MMHNSQSGSKCSIATLPIREISGRVLPIICFDSGHIFGSALHHALQLARTRSIATITNTTRSIVLLLDFYISTDADNLAS DGDRQRFLTTFALALQNGTSVPDGIDPTGLNWKPRSLRESRRVWQNCEKFLIECRHFPKGRHPIENTWLFTTDLRLKKLA RTTSKSLSLFAHLKFGEQNGIDWIPRYSGIAANQRRAIGFPTDKIMKLITTTLENNRASKAARLRDALAFILLAYGGIRS SELFHIWITDIVLNDSGARAFLRHPSDYTVKRAGMTITRRSELSDRYNLIPRHMMDPSHPLHAGWKGISFDYNHSAVVYW IPPVIGKIFANLHMLWVSKFRPVAPDHPYYFTSVDIDGDFGGPWTRSAFRRSFKAACARIGLQLDQAKGISPHGMRHAYG IAATTLGLSQSAIQQMLHHRHPLSQEVYKQQSFDQVTSQIQYAYENLKSETLTTPNFDSFFWKSDPQRLFNTWRHS
Sequences:
>Translated_476_residues MMHNSQSGSKCSIATLPIREISGRVLPIICFDSGHIFGSALHHALQLARTRSIATITNTTRSIVLLLDFYISTDADNLAS DGDRQRFLTTFALALQNGTSVPDGIDPTGLNWKPRSLRESRRVWQNCEKFLIECRHFPKGRHPIENTWLFTTDLRLKKLA RTTSKSLSLFAHLKFGEQNGIDWIPRYSGIAANQRRAIGFPTDKIMKLITTTLENNRASKAARLRDALAFILLAYGGIRS SELFHIWITDIVLNDSGARAFLRHPSDYTVKRAGMTITRRSELSDRYNLIPRHMMDPSHPLHAGWKGISFDYNHSAVVYW IPPVIGKIFANLHMLWVSKFRPVAPDHPYYFTSVDIDGDFGGPWTRSAFRRSFKAACARIGLQLDQAKGISPHGMRHAYG IAATTLGLSQSAIQQMLHHRHPLSQEVYKQQSFDQVTSQIQYAYENLKSETLTTPNFDSFFWKSDPQRLFNTWRHS >Mature_476_residues MMHNSQSGSKCSIATLPIREISGRVLPIICFDSGHIFGSALHHALQLARTRSIATITNTTRSIVLLLDFYISTDADNLAS DGDRQRFLTTFALALQNGTSVPDGIDPTGLNWKPRSLRESRRVWQNCEKFLIECRHFPKGRHPIENTWLFTTDLRLKKLA RTTSKSLSLFAHLKFGEQNGIDWIPRYSGIAANQRRAIGFPTDKIMKLITTTLENNRASKAARLRDALAFILLAYGGIRS SELFHIWITDIVLNDSGARAFLRHPSDYTVKRAGMTITRRSELSDRYNLIPRHMMDPSHPLHAGWKGISFDYNHSAVVYW IPPVIGKIFANLHMLWVSKFRPVAPDHPYYFTSVDIDGDFGGPWTRSAFRRSFKAACARIGLQLDQAKGISPHGMRHAYG IAATTLGLSQSAIQQMLHHRHPLSQEVYKQQSFDQVTSQIQYAYENLKSETLTTPNFDSFFWKSDPQRLFNTWRHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54128; Mature: 54128
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHNSQSGSKCSIATLPIREISGRVLPIICFDSGHIFGSALHHALQLARTRSIATITNTT CCCCCCCCCEEEEEEEEHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCH RSIVLLLDFYISTDADNLASDGDRQRFLTTFALALQNGTSVPDGIDPTGLNWKPRSLRES HHHHHEEEHHHCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH RRVWQNCEKFLIECRHFPKGRHPIENTWLFTTDLRLKKLARTTSKSLSLFAHLKFGEQNG HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHEEEEEEEECCCCC IDWIPRYSGIAANQRRAIGFPTDKIMKLITTTLENNRASKAARLRDALAFILLAYGGIRS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC SELFHIWITDIVLNDSGARAFLRHPSDYTVKRAGMTITRRSELSDRYNLIPRHMMDPSHP CCEEEEEEEEEEECCCCCEEEHCCCCCCEEECCCCEEEEHHHHHHHHHCCHHHHCCCCCC LHAGWKGISFDYNHSAVVYWIPPVIGKIFANLHMLWVSKFRPVAPDHPYYFTSVDIDGDF CCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC GGPWTRSAFRRSFKAACARIGLQLDQAKGISPHGMRHAYGIAATTLGLSQSAIQQMLHHR CCCCHHHHHHHHHHHHHHHHCCEEHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHC HPLSQEVYKQQSFDQVTSQIQYAYENLKSETLTTPNFDSFFWKSDPQRLFNTWRHS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MMHNSQSGSKCSIATLPIREISGRVLPIICFDSGHIFGSALHHALQLARTRSIATITNTT CCCCCCCCCEEEEEEEEHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCH RSIVLLLDFYISTDADNLASDGDRQRFLTTFALALQNGTSVPDGIDPTGLNWKPRSLRES HHHHHEEEHHHCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH RRVWQNCEKFLIECRHFPKGRHPIENTWLFTTDLRLKKLARTTSKSLSLFAHLKFGEQNG HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHEEEEEEEECCCCC IDWIPRYSGIAANQRRAIGFPTDKIMKLITTTLENNRASKAARLRDALAFILLAYGGIRS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC SELFHIWITDIVLNDSGARAFLRHPSDYTVKRAGMTITRRSELSDRYNLIPRHMMDPSHP CCEEEEEEEEEEECCCCCEEEHCCCCCCEEECCCCEEEEHHHHHHHHHCCHHHHCCCCCC LHAGWKGISFDYNHSAVVYWIPPVIGKIFANLHMLWVSKFRPVAPDHPYYFTSVDIDGDF CCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC GGPWTRSAFRRSFKAACARIGLQLDQAKGISPHGMRHAYGIAATTLGLSQSAIQQMLHHR CCCCHHHHHHHHHHHHHHHHCCEEHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHC HPLSQEVYKQQSFDQVTSQIQYAYENLKSETLTTPNFDSFFWKSDPQRLFNTWRHS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA