| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259823
Identifier: 148259823
GI number: 148259823
Start: 903410
End: 903670
Strand: Reverse
Name: 148259823
Synonym: Acry_0812
Alternate gene names: NA
Gene position: 903670-903410 (Counterclockwise)
Preceding gene: 148259824
Following gene: 148259822
Centisome position: 26.66
GC content: 69.73
Gene sequence:
>261_bases ATGACCCCCGACCCCGTCGTGGCGGGCGGGGCCGGCGCGACGGCGGGCGAGACGATCGACGACGTCGCCGCGGCGGCGCG GGCCTGCACGGTCTGCGCCGCGTCATTGCCGCTGGGCCCGCGCCCGGTGTTCCGCATCTCGGCCACGGCGCGCGTGCTGA TCGTCGGGCAGGCGCCGGGGACGAAGGTTCACGCGAGCGGGATTTTTGATACCTACTTATACCTACTCTATGCTCAGACG TTGCGCTTTACATCCGACTGA
Upstream 100 bases:
>100_bases ATCTGGCCGCCATTCGGGCGCATGAGCTGGTCGATGCCTGGTACCGGGACGCCGCCGCGGAGCCGGACGACTGGAAGATC GCCCGATACGAGACGTGACC
Downstream 100 bases:
>100_bases CATCTGCCAAACTATTGCTCGCCAAGTTGCGGAATCAGACCACCATTGTCCGGCGTATTGTCGAAGAGAACTCGCTGTGG TTCGCACTGTTTAGCTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MTPDPVVAGGAGATAGETIDDVAAAARACTVCAASLPLGPRPVFRISATARVLIVGQAPGTKVHASGIFDTYLYLLYAQT LRFTSD
Sequences:
>Translated_86_residues MTPDPVVAGGAGATAGETIDDVAAAARACTVCAASLPLGPRPVFRISATARVLIVGQAPGTKVHASGIFDTYLYLLYAQT LRFTSD >Mature_85_residues TPDPVVAGGAGATAGETIDDVAAAARACTVCAASLPLGPRPVFRISATARVLIVGQAPGTKVHASGIFDTYLYLLYAQTL RFTSD
Specific function: Unknown
COG id: COG1573
COG function: function code L; Uracil-DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8766; Mature: 8635
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDPVVAGGAGATAGETIDDVAAAARACTVCAASLPLGPRPVFRISATARVLIVGQAPG CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCC TKVHASGIFDTYLYLLYAQTLRFTSD CEEECCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPDPVVAGGAGATAGETIDDVAAAARACTVCAASLPLGPRPVFRISATARVLIVGQAPG CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCC TKVHASGIFDTYLYLLYAQTLRFTSD CEEECCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA