| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259654
Identifier: 148259654
GI number: 148259654
Start: 723209
End: 724993
Strand: Reverse
Name: 148259654
Synonym: Acry_0641
Alternate gene names: NA
Gene position: 724993-723209 (Counterclockwise)
Preceding gene: 148259655
Following gene: 148259653
Centisome position: 21.39
GC content: 71.43
Gene sequence:
>1785_bases ATGGCGGACCACCCGACGACAGAGTTCTTCCGGCCGGACACCACCCCGTCCGCCGACTGGGGCGCGGCCGGCAACTGGAG CGGCGGCACCGTTCCCTCCGCCGGCGTCACCGCCGAGATCGTCGGGCTCTTCGCCTCGATCGACCCGACCATGACGATCG AGACCGCCATCCGCCTGGAGGGTGGCGCGGACGCGGCCGGGCTGGTCGGCAACGGCGGCGCGGTTGCCCTGGGGCGAAAC TCCTGGCTCGACGTCGCCGCCGCCGCCGACCTGTTCGCCTATGATTCCGCCGTCGGCATGGGGACCATCTCGCTCGCCTG CGACGCGACGCTCAATGTCGTGGTCGATCTCGGCGCCCTGACCGGGTTGCCCGGCGCGGCCCCGCCCAGCTTCGGCAATG ACGGCACGATCGATATCGGCGCCGGCGCGCTGGTCGAGATCGGCGGCACGGCATTCGACAATCGGGGCACCGTCGATATT GCCGCGGGCACGCTCGCCGTCGAGGGCGGCGCCGTGCAAGGCGGCGGGCTGATCGCCCTGAGCGGCGGCGCCTCCGCCCT GCTGGCCGACGGCGTCGCCGGCCAGACCTTCCTGTTCGGCCCCGGCGGCGGGACGCTGACGCTCGAAGATCCCTATCTCG GCCGTGGCGTCACGATCGCCGACCTCGCGCCCGGCGACACGATCGTCCTGCCGACGCTGCGCAACGGCGAGGTCCGCGAG ACCGGCGATGCCGTGAGCCTCATCGACGCCGCCGGCCATGTCGACGGGCAGTTCGTGCTCCGGGACGCGGCCGGCTTCCA TGTCGAGACCGGCTCCGGCGGAACGACGATCAGCGGCGGCGCCTACGATCCCCCCTGTTTCGCGCGCGGCACCCTTATCC TGACCCGCGAAGGGCTTCGCCCGGTCGAAACCCTCGCCGCCGGCGACGAGGTCGTCACGGCCGACGGAAAGCTCGTGCCC GTCATCTGGACCGGTTCGCGCACGCTCGATCTCGCGATGCACCCGGCGCCCGAGAAGGTGAAACCCGTCTGCTTCGCGCC CGGATCGATGGCCGACGGCGTCCCCGCCCGCCGCCTGCGGCTTTCGCCCGATCACGCGGTCTGGTTCGACAACCTCCTGA TTCCCGCCAAGTTCCTCGTCAACGGCGCGACCATCACGCAGGACGAGGCCTGCCTCGCCATCACCTACTACCATGTCGAG CTGGCCCGGCACGACGTGATCCTGGCCGAGGGCGCGCCATGCGAGAGCTACCTCGACACCGGCAACCGCGCCGGCTTCAC CACGGCGCAGGCCTGGCCGGTCCGCGATCTCCGCTGGGACCGGGATGCCTGCGCGCCGCTCTGCACCGGCGGGCCGGCGC TCCTCGCGGTGCGGCAGCAGCTGCATCATCGCGCGCTGTCCGAAGGCTTCCGGGTCGGCACCGTCCGGGACGCCGCGCTG TGGACAGGAGGCGTGATCCTGCCCGTCGAAACCGCAGACTGGCTGTCCCTCCCTTCCGGGCATGACGGCAGGGCCATTCT CCGGTCATCGTGTTTCGTGCCGGCCTGCGTCGATCCCGCGTCCGATGACCGGCGCACCCTCGGCGTCGCCCTCGCCGCGC TGCAGACCGACCTCGGCGAGATTCAGCTCGACAACTGTGCCGTCCAGGGTTTCCACAATCGTGCGTCAGGCGACGCGGCA AGATGGACCAATGGCCGTGGCGAAATCATGCTGCCACGCCAGGCTCGGCGCATCCGTGTCTGCCTCGAAGCCTTCCCGCG CCTCTGGCAGCGGGCCGGCGGATAG
Upstream 100 bases:
>100_bases AACAGTTCTGCTAACGCGCCTTTAAATTCGGGCGTAAAAACCACGCCTCCTTGGCGGCCGCCGGCTCATGATGACCGGGC CGGGCCGTTGGAGATGCGCG
Downstream 100 bases:
>100_bases CATAGGAATCGTCGCAGCCGGTGAGATGTTCAATCTTTAATGTAATATTAACTTTTTCGGAGACCGCCTCGTCCAAATTT CAGCTTCGCAACCTGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Hemagglutinin-Related Protein; Type I Secretion Target Repeat-Containing Protein; Triple Helix Repeat-Containing Collagen; Adhesin Family Protein; Peptidase Metallopeptidase; Collagen Triple Helix Repeat-Containing Protein; Collagen Triple Helix Repeat; Peroxidase; Bifunctional Hemolysin/Adenylate Cyclase
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MADHPTTEFFRPDTTPSADWGAAGNWSGGTVPSAGVTAEIVGLFASIDPTMTIETAIRLEGGADAAGLVGNGGAVALGRN SWLDVAAAADLFAYDSAVGMGTISLACDATLNVVVDLGALTGLPGAAPPSFGNDGTIDIGAGALVEIGGTAFDNRGTVDI AAGTLAVEGGAVQGGGLIALSGGASALLADGVAGQTFLFGPGGGTLTLEDPYLGRGVTIADLAPGDTIVLPTLRNGEVRE TGDAVSLIDAAGHVDGQFVLRDAAGFHVETGSGGTTISGGAYDPPCFARGTLILTREGLRPVETLAAGDEVVTADGKLVP VIWTGSRTLDLAMHPAPEKVKPVCFAPGSMADGVPARRLRLSPDHAVWFDNLLIPAKFLVNGATITQDEACLAITYYHVE LARHDVILAEGAPCESYLDTGNRAGFTTAQAWPVRDLRWDRDACAPLCTGGPALLAVRQQLHHRALSEGFRVGTVRDAAL WTGGVILPVETADWLSLPSGHDGRAILRSSCFVPACVDPASDDRRTLGVALAALQTDLGEIQLDNCAVQGFHNRASGDAA RWTNGRGEIMLPRQARRIRVCLEAFPRLWQRAGG
Sequences:
>Translated_594_residues MADHPTTEFFRPDTTPSADWGAAGNWSGGTVPSAGVTAEIVGLFASIDPTMTIETAIRLEGGADAAGLVGNGGAVALGRN SWLDVAAAADLFAYDSAVGMGTISLACDATLNVVVDLGALTGLPGAAPPSFGNDGTIDIGAGALVEIGGTAFDNRGTVDI AAGTLAVEGGAVQGGGLIALSGGASALLADGVAGQTFLFGPGGGTLTLEDPYLGRGVTIADLAPGDTIVLPTLRNGEVRE TGDAVSLIDAAGHVDGQFVLRDAAGFHVETGSGGTTISGGAYDPPCFARGTLILTREGLRPVETLAAGDEVVTADGKLVP VIWTGSRTLDLAMHPAPEKVKPVCFAPGSMADGVPARRLRLSPDHAVWFDNLLIPAKFLVNGATITQDEACLAITYYHVE LARHDVILAEGAPCESYLDTGNRAGFTTAQAWPVRDLRWDRDACAPLCTGGPALLAVRQQLHHRALSEGFRVGTVRDAAL WTGGVILPVETADWLSLPSGHDGRAILRSSCFVPACVDPASDDRRTLGVALAALQTDLGEIQLDNCAVQGFHNRASGDAA RWTNGRGEIMLPRQARRIRVCLEAFPRLWQRAGG >Mature_593_residues ADHPTTEFFRPDTTPSADWGAAGNWSGGTVPSAGVTAEIVGLFASIDPTMTIETAIRLEGGADAAGLVGNGGAVALGRNS WLDVAAAADLFAYDSAVGMGTISLACDATLNVVVDLGALTGLPGAAPPSFGNDGTIDIGAGALVEIGGTAFDNRGTVDIA AGTLAVEGGAVQGGGLIALSGGASALLADGVAGQTFLFGPGGGTLTLEDPYLGRGVTIADLAPGDTIVLPTLRNGEVRET GDAVSLIDAAGHVDGQFVLRDAAGFHVETGSGGTTISGGAYDPPCFARGTLILTREGLRPVETLAAGDEVVTADGKLVPV IWTGSRTLDLAMHPAPEKVKPVCFAPGSMADGVPARRLRLSPDHAVWFDNLLIPAKFLVNGATITQDEACLAITYYHVEL ARHDVILAEGAPCESYLDTGNRAGFTTAQAWPVRDLRWDRDACAPLCTGGPALLAVRQQLHHRALSEGFRVGTVRDAALW TGGVILPVETADWLSLPSGHDGRAILRSSCFVPACVDPASDDRRTLGVALAALQTDLGEIQLDNCAVQGFHNRASGDAAR WTNGRGEIMLPRQARRIRVCLEAFPRLWQRAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61205; Mature: 61073
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHPTTEFFRPDTTPSADWGAAGNWSGGTVPSAGVTAEIVGLFASIDPTMTIETAIRLE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEC GGADAAGLVGNGGAVALGRNSWLDVAAAADLFAYDSAVGMGTISLACDATLNVVVDLGAL CCCCCCCEECCCCEEEECCCCCEEHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEHHH TGLPGAAPPSFGNDGTIDIGAGALVEIGGTAFDNRGTVDIAAGTLAVEGGAVQGGGLIAL CCCCCCCCCCCCCCCEEEECCCEEEEECCEEECCCCEEEEEECEEEECCCEECCCCEEEE SGGASALLADGVAGQTFLFGPGGGTLTLEDPYLGRGVTIADLAPGDTIVLPTLRNGEVRE CCCCCEEEECCCCCCEEEEECCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCC TGDAVSLIDAAGHVDGQFVLRDAAGFHVETGSGGTTISGGAYDPPCFARGTLILTREGLR CCCEEEEEHHCCCCCCEEEEEECCCEEEEECCCCCEECCCCCCCCCHHCCEEEEEECCCC PVETLAAGDEVVTADGKLVPVIWTGSRTLDLAMHPAPEKVKPVCFAPGSMADGVPARRLR HHHHHHCCCEEEECCCCEEEEEEECCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEE LSPDHAVWFDNLLIPAKFLVNGATITQDEACLAITYYHVELARHDVILAEGAPCESYLDT ECCCCEEEECCEEECHHHEECCCEEECCCCEEEEEEEEEEEECCEEEEECCCCHHHHHCC GNRAGFTTAQAWPVRDLRWDRDACAPLCTGGPALLAVRQQLHHRALSEGFRVGTVRDAAL CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHE WTGGVILPVETADWLSLPSGHDGRAILRSSCFVPACVDPASDDRRTLGVALAALQTDLGE ECCCEEEEECCHHHHCCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCC IQLDNCAVQGFHNRASGDAARWTNGRGEIMLPRQARRIRVCLEAFPRLWQRAGG EEECCEEEECCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADHPTTEFFRPDTTPSADWGAAGNWSGGTVPSAGVTAEIVGLFASIDPTMTIETAIRLE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEC GGADAAGLVGNGGAVALGRNSWLDVAAAADLFAYDSAVGMGTISLACDATLNVVVDLGAL CCCCCCCEECCCCEEEECCCCCEEHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEHHH TGLPGAAPPSFGNDGTIDIGAGALVEIGGTAFDNRGTVDIAAGTLAVEGGAVQGGGLIAL CCCCCCCCCCCCCCCEEEECCCEEEEECCEEECCCCEEEEEECEEEECCCEECCCCEEEE SGGASALLADGVAGQTFLFGPGGGTLTLEDPYLGRGVTIADLAPGDTIVLPTLRNGEVRE CCCCCEEEECCCCCCEEEEECCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCC TGDAVSLIDAAGHVDGQFVLRDAAGFHVETGSGGTTISGGAYDPPCFARGTLILTREGLR CCCEEEEEHHCCCCCCEEEEEECCCEEEEECCCCCEECCCCCCCCCHHCCEEEEEECCCC PVETLAAGDEVVTADGKLVPVIWTGSRTLDLAMHPAPEKVKPVCFAPGSMADGVPARRLR HHHHHHCCCEEEECCCCEEEEEEECCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEE LSPDHAVWFDNLLIPAKFLVNGATITQDEACLAITYYHVELARHDVILAEGAPCESYLDT ECCCCEEEECCEEECHHHEECCCEEECCCCEEEEEEEEEEEECCEEEEECCCCHHHHHCC GNRAGFTTAQAWPVRDLRWDRDACAPLCTGGPALLAVRQQLHHRALSEGFRVGTVRDAAL CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHHE WTGGVILPVETADWLSLPSGHDGRAILRSSCFVPACVDPASDDRRTLGVALAALQTDLGE ECCCEEEEECCHHHHCCCCCCCCHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCC IQLDNCAVQGFHNRASGDAARWTNGRGEIMLPRQARRIRVCLEAFPRLWQRAGG EEECCEEEECCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA