| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is kdgK [H]
Identifier: 148259473
GI number: 148259473
Start: 509103
End: 510044
Strand: Reverse
Name: kdgK [H]
Synonym: Acry_0457
Alternate gene names: 148259473
Gene position: 510044-509103 (Counterclockwise)
Preceding gene: 148259474
Following gene: 148259472
Centisome position: 15.05
GC content: 65.5
Gene sequence:
>942_bases ATGACCGGCATGATCGTGACCATGGGTGAAATCCTCGTCGACATTCTCGCCGAGGAAAAGGGCCAGGGCTTCCACGAGCC CGGCCGGCTGCTTGGCCCCTTCCCCGGCGGCGCGCCGGCGACCTTCATCGCCCAGGCCGCACGGCTTGGTGCTGGCGCGG GCATCATCTCCTGCATCGGCGACGACGATTTCGGCTGGCTCTGCGTCGACCGGCTGCGGCGCGAGGGGGCGGATGTGAGC GCCGTGCGGATCGAGCCGGACCAGGTGACGGCAAGCGCCTTCGTGCGCTACCGCGAGGATGGCGACCGCGACTTCCTGTT CAACCTCAAGCGCAGCGCCGCGGGGCGGATCACGATCGACGCCGCCGCACGGGCGATGCTCGCTCAATGCGCGCATTTCC ACATCATGGGGTCGTCGCTCTTCTCGTTTCATATCATTGACGAAATGAAAAAGGCGATCGAGCTGGCCAAGGCGAACGGC GCGGTGATTTCCTTCGATCCGAACATCCGCAAGGAAATGCTGATGATTCCGGAAATGCGCGCGGGCCTCGAATTCATGCT CGGCTATACCGACATCTTCATGCCGTCAGGCCCTGAGATCCTGCTGCCGACCGAGGCGAAGTCGGAACGCGCGGCGGTCG AGGAACTGCTCGATCTCGGCGTACGGATGGTAGTGATCAAACGCAGCCGCAAGGGTGTGAGTTTCCGCTCGCGCGATGAA CAATTCGACCTGCCGGCGTTTCCGGTGGAGGAGATCGACCCGACCGGGGCGGGCGACTGTTTCGGCGCTGCCTTCGTCAC CTGCCTGTTGCAGGGGATGGGGACAAGGCGGGCGCTCGACTATGCCCGCGCGGCGGGCGCGCTCGCCGTCAGCCGCAAGG GCGGGATGGAAGGGGTTGCCGACTTCGCAACGCTCGACGCCTTCATCGCCGCCGCGGGCTGA
Upstream 100 bases:
>100_bases CCGGCTTCAGGCCTGTCGAGACCGATGGCGGAACCGAGGCGCATTTCTCCAGCCATCCCGCGCATAGCCGGAGCGGCGCC AGGGCGTTCGGCGAGGCGTC
Downstream 100 bases:
>100_bases GCGGCAACCGGAACGAGGAGGACCGCCATGAGCCACCCGGCAAACCATATCGTCATTGGCGTCGATGTCGGCACCGGCAG CGCTCGCGCTGGCGTGTTCG
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTGMIVTMGEILVDILAEEKGQGFHEPGRLLGPFPGGAPATFIAQAARLGAGAGIISCIGDDDFGWLCVDRLRREGADVS AVRIEPDQVTASAFVRYREDGDRDFLFNLKRSAAGRITIDAAARAMLAQCAHFHIMGSSLFSFHIIDEMKKAIELAKANG AVISFDPNIRKEMLMIPEMRAGLEFMLGYTDIFMPSGPEILLPTEAKSERAAVEELLDLGVRMVVIKRSRKGVSFRSRDE QFDLPAFPVEEIDPTGAGDCFGAAFVTCLLQGMGTRRALDYARAAGALAVSRKGGMEGVADFATLDAFIAAAG
Sequences:
>Translated_313_residues MTGMIVTMGEILVDILAEEKGQGFHEPGRLLGPFPGGAPATFIAQAARLGAGAGIISCIGDDDFGWLCVDRLRREGADVS AVRIEPDQVTASAFVRYREDGDRDFLFNLKRSAAGRITIDAAARAMLAQCAHFHIMGSSLFSFHIIDEMKKAIELAKANG AVISFDPNIRKEMLMIPEMRAGLEFMLGYTDIFMPSGPEILLPTEAKSERAAVEELLDLGVRMVVIKRSRKGVSFRSRDE QFDLPAFPVEEIDPTGAGDCFGAAFVTCLLQGMGTRRALDYARAAGALAVSRKGGMEGVADFATLDAFIAAAG >Mature_312_residues TGMIVTMGEILVDILAEEKGQGFHEPGRLLGPFPGGAPATFIAQAARLGAGAGIISCIGDDDFGWLCVDRLRREGADVSA VRIEPDQVTASAFVRYREDGDRDFLFNLKRSAAGRITIDAAARAMLAQCAHFHIMGSSLFSFHIIDEMKKAIELAKANGA VISFDPNIRKEMLMIPEMRAGLEFMLGYTDIFMPSGPEILLPTEAKSERAAVEELLDLGVRMVVIKRSRKGVSFRSRDEQ FDLPAFPVEEIDPTGAGDCFGAAFVTCLLQGMGTRRALDYARAAGALAVSRKGGMEGVADFATLDAFIAAAG
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87081971, Length=307, Percent_Identity=25.0814332247557, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1790193, Length=317, Percent_Identity=25.8675078864353, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17532905, Length=309, Percent_Identity=25.8899676375405, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 33644; Mature: 33513
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGMIVTMGEILVDILAEEKGQGFHEPGRLLGPFPGGAPATFIAQAARLGAGAGIISCIG CCCEEEHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEEC DDDFGWLCVDRLRREGADVSAVRIEPDQVTASAFVRYREDGDRDFLFNLKRSAAGRITID CCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHEEEEHHCCCCEEEHH AAARAMLAQCAHFHIMGSSLFSFHIIDEMKKAIELAKANGAVISFDPNIRKEMLMIPEMR HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCHHH AGLEFMLGYTDIFMPSGPEILLPTEAKSERAAVEELLDLGVRMVVIKRSRKGVSFRSRDE HHHHHHHCHHHEECCCCCCEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC QFDLPAFPVEEIDPTGAGDCFGAAFVTCLLQGMGTRRALDYARAAGALAVSRKGGMEGVA CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCHHH DFATLDAFIAAAG HHHHHHHHHHCCC >Mature Secondary Structure TGMIVTMGEILVDILAEEKGQGFHEPGRLLGPFPGGAPATFIAQAARLGAGAGIISCIG CCEEEHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEEC DDDFGWLCVDRLRREGADVSAVRIEPDQVTASAFVRYREDGDRDFLFNLKRSAAGRITID CCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHEEEEHHCCCCEEEHH AAARAMLAQCAHFHIMGSSLFSFHIIDEMKKAIELAKANGAVISFDPNIRKEMLMIPEMR HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCCHHH AGLEFMLGYTDIFMPSGPEILLPTEAKSERAAVEELLDLGVRMVVIKRSRKGVSFRSRDE HHHHHHHCHHHEECCCCCCEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC QFDLPAFPVEEIDPTGAGDCFGAAFVTCLLQGMGTRRALDYARAAGALAVSRKGGMEGVA CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCCCHHH DFATLDAFIAAAG HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]