| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148259336
Identifier: 148259336
GI number: 148259336
Start: 368973
End: 369968
Strand: Reverse
Name: 148259336
Synonym: Acry_0317
Alternate gene names: NA
Gene position: 369968-368973 (Counterclockwise)
Preceding gene: 148259337
Following gene: 148259333
Centisome position: 10.92
GC content: 67.37
Gene sequence:
>996_bases ATGAAACTCAGGATGTCCTTCGCTTCGGCGGCCGCCATCGCGGCGGCGCTGTTCTGCGGCACGGCCGCCGCGGCCCCGCA GCACAAGCTCGGCGCCGGGCTGACCATGTATTTCCAGATGGGCGGCAGCCCCGGCGACGCCTCGACGCTGCCGCGCGAAC TCGGCGCCAAGGCGGCGGCCAAGGCGCTCGGCGTGCGGCTGATCTCGCAATATTCCGACTGGCAGCCGGAAAAGATGATC GAGCAGTTCCGCCAGGCCATCGCCGCCGGGCCGCAATGCGCCGAGATCATGGGCCATCCGGGCAACGCCGCCTTCGCGCC GCTGGTGAGCAAGGCCGAGGCCCAGGGCATGGTGGTCACCGCCGGGAACGTGCCGCTGCCCAAGCTCGAGGCGAAATACC GGACCAACGGGTTCGGCTATGTCGGCACCTATCTCGTGCAGGGCGGCGAGACCACCGCGGCGGCGATGGTCAAGGCCGGG CACCTGAAGCCGGGTGACGAGGCGCTCGAATACGGCGTCTTCGCCGAGGGGATCCGCGGCGAATCCGACGAGGGCCTGGT GATGGGGCTGAAGAAGGCCGGGCTCAAGGTCTACAAGCTCAACATCTCGAACGCCGTCAACGCCGATCCGGCGCTGTCGG TGCCGATCCTCGTCGCCTTCATCGAGCGGCATCCGAAGCTCAAGGCGATCGGCACGCAGCAGGGGCTGGTGACCTCGTTC ATTCCGAAGGCGTTGCAGGAGGCCGGCAAGAAGCCCGGGCAGATCGTCGTCGGCGGCATCGATCTCGCGCCGACCACCAT CGCCGGGGTGAAGAGCGGCTACATCGCCGCGACGCTGAACCAGCAGCTCTACATGCAGGGCTTCCTGCCGGTGGTGCAGT GCGTGCTGACCAAGCGGTTCGACCTCGAGGGCATGAACGTCAACACCGCCGCCGGCACCGACGACAAGGCGCTGCTCGAC AAGATCGAGCCGCTGATCAAGAAGGGCTATTACTGA
Upstream 100 bases:
>100_bases GACCCGGCGAGGGTGAAGGCTCTGCAGCGACGACTGATGCAACGCGAGTAAAGCCCGCCGGCATGACGGGCACCTCAAGG CAAACAAAGGGAGAGACGGG
Downstream 100 bases:
>100_bases TCCGGCGCTGACCCGGCGCCGGCCACGAGCGCCGGGTCGAGGCCGACGAGGTCGCGGTAGCGCGCCGTGTCGGTCGCGCC CTCGGTATTGAAGACCAGGA
Product: ABC-type sugar transport system periplasmic component-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKLRMSFASAAAIAAALFCGTAAAAPQHKLGAGLTMYFQMGGSPGDASTLPRELGAKAAAKALGVRLISQYSDWQPEKMI EQFRQAIAAGPQCAEIMGHPGNAAFAPLVSKAEAQGMVVTAGNVPLPKLEAKYRTNGFGYVGTYLVQGGETTAAAMVKAG HLKPGDEALEYGVFAEGIRGESDEGLVMGLKKAGLKVYKLNISNAVNADPALSVPILVAFIERHPKLKAIGTQQGLVTSF IPKALQEAGKKPGQIVVGGIDLAPTTIAGVKSGYIAATLNQQLYMQGFLPVVQCVLTKRFDLEGMNVNTAAGTDDKALLD KIEPLIKKGYY
Sequences:
>Translated_331_residues MKLRMSFASAAAIAAALFCGTAAAAPQHKLGAGLTMYFQMGGSPGDASTLPRELGAKAAAKALGVRLISQYSDWQPEKMI EQFRQAIAAGPQCAEIMGHPGNAAFAPLVSKAEAQGMVVTAGNVPLPKLEAKYRTNGFGYVGTYLVQGGETTAAAMVKAG HLKPGDEALEYGVFAEGIRGESDEGLVMGLKKAGLKVYKLNISNAVNADPALSVPILVAFIERHPKLKAIGTQQGLVTSF IPKALQEAGKKPGQIVVGGIDLAPTTIAGVKSGYIAATLNQQLYMQGFLPVVQCVLTKRFDLEGMNVNTAAGTDDKALLD KIEPLIKKGYY >Mature_331_residues MKLRMSFASAAAIAAALFCGTAAAAPQHKLGAGLTMYFQMGGSPGDASTLPRELGAKAAAKALGVRLISQYSDWQPEKMI EQFRQAIAAGPQCAEIMGHPGNAAFAPLVSKAEAQGMVVTAGNVPLPKLEAKYRTNGFGYVGTYLVQGGETTAAAMVKAG HLKPGDEALEYGVFAEGIRGESDEGLVMGLKKAGLKVYKLNISNAVNADPALSVPILVAFIERHPKLKAIGTQQGLVTSF IPKALQEAGKKPGQIVVGGIDLAPTTIAGVKSGYIAATLNQQLYMQGFLPVVQCVLTKRFDLEGMNVNTAAGTDDKALLD KIEPLIKKGYY
Specific function: Unknown
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34654; Mature: 34654
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRMSFASAAAIAAALFCGTAAAAPQHKLGAGLTMYFQMGGSPGDASTLPRELGAKAAA CEEECHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCHHHCHHHHHHHHHH KALGVRLISQYSDWQPEKMIEQFRQAIAAGPQCAEIMGHPGNAAFAPLVSKAEAQGMVVT HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCEEEE AGNVPLPKLEAKYRTNGFGYVGTYLVQGGETTAAAMVKAGHLKPGDEALEYGVFAEGIRG ECCCCCCCCCHHHCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC ESDEGLVMGLKKAGLKVYKLNISNAVNADPALSVPILVAFIERHPKLKAIGTQQGLVTSF CCCCCEEEEHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHH IPKALQEAGKKPGQIVVGGIDLAPTTIAGVKSGYIAATLNQQLYMQGFLPVVQCVLTKRF HHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC DLEGMNVNTAAGTDDKALLDKIEPLIKKGYY CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLRMSFASAAAIAAALFCGTAAAAPQHKLGAGLTMYFQMGGSPGDASTLPRELGAKAAA CEEECHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCHHHCHHHHHHHHHH KALGVRLISQYSDWQPEKMIEQFRQAIAAGPQCAEIMGHPGNAAFAPLVSKAEAQGMVVT HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHCCEEEE AGNVPLPKLEAKYRTNGFGYVGTYLVQGGETTAAAMVKAGHLKPGDEALEYGVFAEGIRG ECCCCCCCCCHHHCCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC ESDEGLVMGLKKAGLKVYKLNISNAVNADPALSVPILVAFIERHPKLKAIGTQQGLVTSF CCCCCEEEEHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHH IPKALQEAGKKPGQIVVGGIDLAPTTIAGVKSGYIAATLNQQLYMQGFLPVVQCVLTKRF HHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC DLEGMNVNTAAGTDDKALLDKIEPLIKKGYY CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA