| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148259333
Identifier: 148259333
GI number: 148259333
Start: 365304
End: 365765
Strand: Reverse
Name: 148259333
Synonym: Acry_0314
Alternate gene names: NA
Gene position: 365765-365304 (Counterclockwise)
Preceding gene: 148259336
Following gene: 148259332
Centisome position: 10.79
GC content: 73.81
Gene sequence:
>462_bases ATGGCTGATGCGCGGTTGACCGACGAGGATTACGAGATGCTGGCCTCGTTCCGCTTCGCGCTGCGGAAGTTCATCGCCTT CAGCGAGGCCGCCGCCCGGCGCGACGGGCTGACGCCGCGCCAGCACCAGGCGCTGCTCGGCATCCGCGCCATGCAGGGCC AGGGCGCGGCGAGCGTTTCCGACCTCGCGGCGTTCCTGATCCTGCAGCACAACAGCACGGTGGAGCTGGTCGACCGGCTG GTGGCCGCCGGTTTCGTGGCGCGGGCGACCGACCCGGAAGACGGGCGGCGGGTGCGGCTGGCGCTGACCGGAAGCGGCGA GGCGCGGCTCGCCGCGCTGTCGCAGACGCATCTGGACGAGCTGGAGCAGATCGGCCCGGAACTGCGGCGGCTGCTCGCGC GCATCCAGCGCTACCGCCGCCGGGTCCGCGGCGCCACGCGCTGCGGGGATGCGGGCGGGTGA
Upstream 100 bases:
>100_bases GGGCGAAGGTGACATCGATGGCGGACTCCGGGCCGGGGAAGAGCTGGCCATATATCGTAATGCGATATACAACGGCAACC CGCCGGGAAGAGGAGACAGC
Downstream 100 bases:
>100_bases TGCCGGCGCCGGAGATTTCTGGCATGATCGGCGCGATGAAGGACGACAACCGGTTCGGCGCCTATCTGCGAAGCCGGCGC GCCAGGCTCGATCCCGCCTC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Regulatory Protein MarR; Transcriptional Regulator; Transcription Regulator Protein; MarR-Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Protein Marr Family; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MADARLTDEDYEMLASFRFALRKFIAFSEAAARRDGLTPRQHQALLGIRAMQGQGAASVSDLAAFLILQHNSTVELVDRL VAAGFVARATDPEDGRRVRLALTGSGEARLAALSQTHLDELEQIGPELRRLLARIQRYRRRVRGATRCGDAGG
Sequences:
>Translated_153_residues MADARLTDEDYEMLASFRFALRKFIAFSEAAARRDGLTPRQHQALLGIRAMQGQGAASVSDLAAFLILQHNSTVELVDRL VAAGFVARATDPEDGRRVRLALTGSGEARLAALSQTHLDELEQIGPELRRLLARIQRYRRRVRGATRCGDAGG >Mature_152_residues ADARLTDEDYEMLASFRFALRKFIAFSEAAARRDGLTPRQHQALLGIRAMQGQGAASVSDLAAFLILQHNSTVELVDRLV AAGFVARATDPEDGRRVRLALTGSGEARLAALSQTHLDELEQIGPELRRLLARIQRYRRRVRGATRCGDAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16802; Mature: 16671
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADARLTDEDYEMLASFRFALRKFIAFSEAAARRDGLTPRQHQALLGIRAMQGQGAASVS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHH DLAAFLILQHNSTVELVDRLVAAGFVARATDPEDGRRVRLALTGSGEARLAALSQTHLDE HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH LEQIGPELRRLLARIQRYRRRVRGATRCGDAGG HHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ADARLTDEDYEMLASFRFALRKFIAFSEAAARRDGLTPRQHQALLGIRAMQGQGAASVS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHH DLAAFLILQHNSTVELVDRLVAAGFVARATDPEDGRRVRLALTGSGEARLAALSQTHLDE HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH LEQIGPELRRLLARIQRYRRRVRGATRCGDAGG HHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA