| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is cobC [C]
Identifier: 148259157
GI number: 148259157
Start: 156613
End: 157167
Strand: Reverse
Name: cobC [C]
Synonym: Acry_0137
Alternate gene names: 148259157
Gene position: 157167-156613 (Counterclockwise)
Preceding gene: 148259166
Following gene: 148259156
Centisome position: 4.64
GC content: 67.03
Gene sequence:
>555_bases ATGATCCTGCTTCGCCACGGCCAGAGCGAGTTCAACCTCCACTTCACCGCGACGCGGCGTGACCCTGGAATCGAGGATCC CGGACTGACCGAACACGGGCACGCGCAGGCGGAGGCCGCGGCTTCGGCGCTTGAAGGGCACTCGCTGCGGCGGCTGATCG TCTCGCCCTATACCCGTACGCTGCAGACGGCAGCGCCGGTGCTGGCGCGGCGGCCCCTCGATGTCGAAATCTCGGCGGAG ATCCGCGAGCGGTTCCACTTCACCTGCGATATCGGCAGCCCACCGGATCGCCTTGCCGAGAGGTTCCCGGATCACGATTT CGCGCACCTGCCGACTCGCTGGTGGCCTGACGAAACCGAGACGGAGGAGGCGGTGATCGAACGCGCGAATCGGTTCCGCG CGGCGATGGCGGCGCGGCCGGATTGGCGGGAGACGCTGGTGGTCAGCCATTGGGCCTTCATCCTGGCACTCACCGGACAG TCACTGACCAACGGTTCATGGATCAACTATGATCCGACCTCGCCGCCGCCGTCCGCCTTGCGCTGGCGTCCCTGA
Upstream 100 bases:
>100_bases AAGCCCGCCCTCGTGATAGGCCGAGCGCGGCGCGCCCGCAACCGCGGCATGCCCGACGCGCGGTTTGCCGAAGCCCCCGG CGCAGGGTATCGCTGAAGGC
Downstream 100 bases:
>100_bases CCGCGGCCGGCGCAGGAGGTCTTGAATCGTGCGTCAGACATCAAAAAATACGTCAGGCCTGAAGTCGTATCGGGACGAGA AGACGGGCGCGGAAAGGCCA
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: Fructose-2 6-Bisphosphatase
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MILLRHGQSEFNLHFTATRRDPGIEDPGLTEHGHAQAEAAASALEGHSLRRLIVSPYTRTLQTAAPVLARRPLDVEISAE IRERFHFTCDIGSPPDRLAERFPDHDFAHLPTRWWPDETETEEAVIERANRFRAAMAARPDWRETLVVSHWAFILALTGQ SLTNGSWINYDPTSPPPSALRWRP
Sequences:
>Translated_184_residues MILLRHGQSEFNLHFTATRRDPGIEDPGLTEHGHAQAEAAASALEGHSLRRLIVSPYTRTLQTAAPVLARRPLDVEISAE IRERFHFTCDIGSPPDRLAERFPDHDFAHLPTRWWPDETETEEAVIERANRFRAAMAARPDWRETLVVSHWAFILALTGQ SLTNGSWINYDPTSPPPSALRWRP >Mature_184_residues MILLRHGQSEFNLHFTATRRDPGIEDPGLTEHGHAQAEAAASALEGHSLRRLIVSPYTRTLQTAAPVLARRPLDVEISAE IRERFHFTCDIGSPPDRLAERFPDHDFAHLPTRWWPDETETEEAVIERANRFRAAMAARPDWRETLVVSHWAFILALTGQ SLTNGSWINYDPTSPPPSALRWRP
Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.73 [C]
Molecular weight: Translated: 20904; Mature: 20904
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLRHGQSEFNLHFTATRRDPGIEDPGLTEHGHAQAEAAASALEGHSLRRLIVSPYTRT CEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCHHHHH LQTAAPVLARRPLDVEISAEIRERFHFTCDIGSPPDRLAERFPDHDFAHLPTRWWPDETE HHHHHHHHHCCCCCEEECHHHHHCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC TEEAVIERANRFRAAMAARPDWRETLVVSHWAFILALTGQSLTNGSWINYDPTSPPPSAL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC RWRP CCCC >Mature Secondary Structure MILLRHGQSEFNLHFTATRRDPGIEDPGLTEHGHAQAEAAASALEGHSLRRLIVSPYTRT CEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCHHHHH LQTAAPVLARRPLDVEISAEIRERFHFTCDIGSPPDRLAERFPDHDFAHLPTRWWPDETE HHHHHHHHHCCCCCEEECHHHHHCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC TEEAVIERANRFRAAMAARPDWRETLVVSHWAFILALTGQSLTNGSWINYDPTSPPPSAL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCC RWRP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA