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The map label for this gene is arpC [H]

Identifier: 148259156

GI number: 148259156

Start: 155076

End: 156584

Strand: Reverse

Name: arpC [H]

Synonym: Acry_0136

Alternate gene names: 148259156

Gene position: 156584-155076 (Counterclockwise)

Preceding gene: 148259157

Following gene: 148259155

Centisome position: 4.62

GC content: 68.92

Gene sequence:

>1509_bases
GTGCGTCAGACATCAAAAAATACGTCAGGCCTGAAGTCGTATCGGGACGAGAAGACGGGCGCGGAAAGGCCAGAGGCGCG
TGACACGACGACCAATCACCGCATGAGGCGCCTCCGCCTCGCCGCCGCCGCGCTGCTGACGCCGGGACTTGCAGGCTGCG
CCGTCGGTCCCGCGTTCCACATGCCGCAGACCAATGTGCCGGCGCGGTTTTCGGCCACCGCGGACGCAAAGCCGGCCTGG
CCGAAGCCCGGATGGTGGCGCCATTTCGGCTCGCCGGAGCTCGACCGGCTGGTGGAAGCGGCGAAGGCACACAATTTCTC
GGTGATCGAGGCGATCGACCAGCTCGAGGCGGCCAACGCGCAGGCACAGATCGCCGGCGCGCCACTGCTGCCAGCGATCA
CGGGCAGCGGCAGCGGGTCATTCCAGCAGATCCAGGCGAATGCCGGCAACGGGCTGCAGGCGGTGGATACGCGCAGCTTC
ACCGCGACGTTCCAGGCCTCCTACCAGCTCGATTTCTGGGGCAAGAACTATGACGCGCTGCGCGCGGCGCAGGCGAACGC
GGCGGCGGCGGAATTCAACGCGGCGACGGTGGCACTGACCGCCGAAGCCTCGGTCGCCACCGTCTATTTCCAGGTACTGG
CGTACCAGGACCAGCTGGGAATTGCGCAACGCAATCTGAAGGCGGCGGAGGGGCTGCTCGCACAGTTGCGGGCGGAACTG
CGGGCCGGGATCGTCGATGCACCGACGGTGGCGCAGCAGGCTGCGCTGGTTGCGTCTGAGCGGGCGAACATTCCCAACCT
GGTCTCGCAGATGCGCCAGGAGGCGATCGGCCTCGGCATCCTGACGGGGCGGGCGCCGGAATTCCTGCGCGTGCGGGGCG
GCTCGCTCGGCGCGCTGACGGTGCCGGCGCTGGCGCCGGGACTGCCGGCCGGGCTGCTGGAGCGCCGGCCCGACATCGCG
GAGGCGAAGGCCAACCTGATCGCCGCCAACGCCAATGTGCGTGGCGCGATCGCGGCGTTCTTCCCGTCGATCACGCTGAC
CGGCTCGGGCGGCTGGCAGAGCAAGGCGCTGAACCTTCTCTTTGCGCCAGGCTCGACACTGATCTCGGCGGCAACCTCGA
TCGCCCAGCCGATCTTCGAGGGCGGTGCACTGACCGGGCAGCTGCGGGTGAGCCGCGCGACCTATCGGGAAGATGTCGCA
AAATACGAGCAGGCGGTGGTGCAGGCTTTCACCGATGTCGAGACCGCGATGACCGCGCTGCGCTACGCCACCGACCAGGA
AGCGCTGCAGCAGGTTGCGGTCGCACGCGCCCGAGCCGCGCTGGATGGCGCCAGGGCGCAGCTCAGGGCCGGCGTGGTCG
ATATCGGCACGGTGCTGAACGCCGAGCAGACCCTGCTGTCGGACGAGACGACGCTGGTGACGACGCGGCTCACCCGGCTC
GATGCCGCGGTCAATCTCTACAAGGCGATGGGCGGTGGCTGGACGGCCGGCGCCGGCAAGGATCACTGA

Upstream 100 bases:

>100_bases
CTGACCAACGGTTCATGGATCAACTATGATCCGACCTCGCCGCCGCCGTCCGCCTTGCGCTGGCGTCCCTGACCGCGGCC
GGCGCAGGAGGTCTTGAATC

Downstream 100 bases:

>100_bases
CGATGGCGAAACGGCGCGGACGGATCATTTTCGGGCTGGTGGCGCTCGCCCTTGTCGGCGCGGTGGCGTACCGGCTGGCG
CACCGGACGAAACCCGCGCA

Product: RND efflux system outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MRQTSKNTSGLKSYRDEKTGAERPEARDTTTNHRMRRLRLAAAALLTPGLAGCAVGPAFHMPQTNVPARFSATADAKPAW
PKPGWWRHFGSPELDRLVEAAKAHNFSVIEAIDQLEAANAQAQIAGAPLLPAITGSGSGSFQQIQANAGNGLQAVDTRSF
TATFQASYQLDFWGKNYDALRAAQANAAAAEFNAATVALTAEASVATVYFQVLAYQDQLGIAQRNLKAAEGLLAQLRAEL
RAGIVDAPTVAQQAALVASERANIPNLVSQMRQEAIGLGILTGRAPEFLRVRGGSLGALTVPALAPGLPAGLLERRPDIA
EAKANLIAANANVRGAIAAFFPSITLTGSGGWQSKALNLLFAPGSTLISAATSIAQPIFEGGALTGQLRVSRATYREDVA
KYEQAVVQAFTDVETAMTALRYATDQEALQQVAVARARAALDGARAQLRAGVVDIGTVLNAEQTLLSDETTLVTTRLTRL
DAAVNLYKAMGGGWTAGAGKDH

Sequences:

>Translated_502_residues
MRQTSKNTSGLKSYRDEKTGAERPEARDTTTNHRMRRLRLAAAALLTPGLAGCAVGPAFHMPQTNVPARFSATADAKPAW
PKPGWWRHFGSPELDRLVEAAKAHNFSVIEAIDQLEAANAQAQIAGAPLLPAITGSGSGSFQQIQANAGNGLQAVDTRSF
TATFQASYQLDFWGKNYDALRAAQANAAAAEFNAATVALTAEASVATVYFQVLAYQDQLGIAQRNLKAAEGLLAQLRAEL
RAGIVDAPTVAQQAALVASERANIPNLVSQMRQEAIGLGILTGRAPEFLRVRGGSLGALTVPALAPGLPAGLLERRPDIA
EAKANLIAANANVRGAIAAFFPSITLTGSGGWQSKALNLLFAPGSTLISAATSIAQPIFEGGALTGQLRVSRATYREDVA
KYEQAVVQAFTDVETAMTALRYATDQEALQQVAVARARAALDGARAQLRAGVVDIGTVLNAEQTLLSDETTLVTTRLTRL
DAAVNLYKAMGGGWTAGAGKDH
>Mature_502_residues
MRQTSKNTSGLKSYRDEKTGAERPEARDTTTNHRMRRLRLAAAALLTPGLAGCAVGPAFHMPQTNVPARFSATADAKPAW
PKPGWWRHFGSPELDRLVEAAKAHNFSVIEAIDQLEAANAQAQIAGAPLLPAITGSGSGSFQQIQANAGNGLQAVDTRSF
TATFQASYQLDFWGKNYDALRAAQANAAAAEFNAATVALTAEASVATVYFQVLAYQDQLGIAQRNLKAAEGLLAQLRAEL
RAGIVDAPTVAQQAALVASERANIPNLVSQMRQEAIGLGILTGRAPEFLRVRGGSLGALTVPALAPGLPAGLLERRPDIA
EAKANLIAANANVRGAIAAFFPSITLTGSGGWQSKALNLLFAPGSTLISAATSIAQPIFEGGALTGQLRVSRATYREDVA
KYEQAVVQAFTDVETAMTALRYATDQEALQQVAVARARAALDGARAQLRAGVVDIGTVLNAEQTLLSDETTLVTTRLTRL
DAAVNLYKAMGGGWTAGAGKDH

Specific function: The outer membrane component of an antibiotic efflux pump. Confers resistance to numerous structurally unrelated antibiotics such as carbenicillin, chloramphenicol, erythromycin, novobiocin, streptomycin and tetracycline. Is not involved in organic solven

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=453, Percent_Identity=31.1258278145695, Blast_Score=181, Evalue=1e-46,
Organism=Escherichia coli, GI2367348, Length=501, Percent_Identity=25.9481037924152, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 52735; Mature: 52735

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQTSKNTSGLKSYRDEKTGAERPEARDTTTNHRMRRLRLAAAALLTPGLAGCAVGPAFH
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC
MPQTNVPARFSATADAKPAWPKPGWWRHFGSPELDRLVEAAKAHNFSVIEAIDQLEAANA
CCCCCCCCEECCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCC
QAQIAGAPLLPAITGSGSGSFQQIQANAGNGLQAVDTRSFTATFQASYQLDFWGKNYDAL
CEEECCCCCCCEEECCCCCCCEEEECCCCCCCEEECCCCEEEEEEEEEEEEECCCCHHHH
RAAQANAAAAEFNAATVALTAEASVATVYFQVLAYQDQLGIAQRNLKAAEGLLAQLRAEL
HHHHCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGIVDAPTVAQQAALVASERANIPNLVSQMRQEAIGLGILTGRAPEFLRVRGGSLGALT
HCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEECCCCCCEEEECCCCCCEEE
VPALAPGLPAGLLERRPDIAEAKANLIAANANVRGAIAAFFPSITLTGSGGWQSKALNLL
HHHHCCCCCHHHHHCCCCHHHHCCCEEEECCCCCHHHHHHCCCEEEECCCCCCCCCEEEE
FAPGSTLISAATSIAQPIFEGGALTGQLRVSRATYREDVAKYEQAVVQAFTDVETAMTAL
ECCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYATDQEALQQVAVARARAALDGARAQLRAGVVDIGTVLNAEQTLLSDETTLVTTRLTRL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHCCCCEEEHHHHHHH
DAAVNLYKAMGGGWTAGAGKDH
HHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure
MRQTSKNTSGLKSYRDEKTGAERPEARDTTTNHRMRRLRLAAAALLTPGLAGCAVGPAFH
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC
MPQTNVPARFSATADAKPAWPKPGWWRHFGSPELDRLVEAAKAHNFSVIEAIDQLEAANA
CCCCCCCCEECCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCC
QAQIAGAPLLPAITGSGSGSFQQIQANAGNGLQAVDTRSFTATFQASYQLDFWGKNYDAL
CEEECCCCCCCEEECCCCCCCEEEECCCCCCCEEECCCCEEEEEEEEEEEEECCCCHHHH
RAAQANAAAAEFNAATVALTAEASVATVYFQVLAYQDQLGIAQRNLKAAEGLLAQLRAEL
HHHHCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGIVDAPTVAQQAALVASERANIPNLVSQMRQEAIGLGILTGRAPEFLRVRGGSLGALT
HCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEECCCCCCEEEECCCCCCEEE
VPALAPGLPAGLLERRPDIAEAKANLIAANANVRGAIAAFFPSITLTGSGGWQSKALNLL
HHHHCCCCCHHHHHCCCCHHHHCCCEEEECCCCCHHHHHHCCCEEEECCCCCCCCCEEEE
FAPGSTLISAATSIAQPIFEGGALTGQLRVSRATYREDVAKYEQAVVQAFTDVETAMTAL
ECCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYATDQEALQQVAVARARAALDGARAQLRAGVVDIGTVLNAEQTLLSDETTLVTTRLTRL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHCCCCEEEHHHHHHH
DAAVNLYKAMGGGWTAGAGKDH
HHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11160799 [H]