| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is hemA [H]
Identifier: 148259065
GI number: 148259065
Start: 43357
End: 44583
Strand: Reverse
Name: hemA [H]
Synonym: Acry_0044
Alternate gene names: 148259065
Gene position: 44583-43357 (Counterclockwise)
Preceding gene: 148259066
Following gene: 148259064
Centisome position: 1.32
GC content: 64.87
Gene sequence:
>1227_bases ATGAATCGCGACCATCCGTTCATCGCCCAATGCGACAAGGCCCTGGCCGATATCCGCGCCGCCGGCCGCTACCGCCGCTT CGTGGCGCTGGAAAAGCTGGCCGATCGTTTCCCCTATTACAAGGTGACGATGGAAGGCCGCACCCAGGACATTCTGGTGT GGTCCTCAAACGATTATCTGGCCATGGGCACCGACCCCGAGGTGATCGAAGCCTCGATCGAGGCCGCGCGCACCATGGGC GCCGGCGCCGGCGGCACGCGCAACATCGCCGGCTCCTCCCCCATCCACGTCGCGCTCGAGGCCGAACTCGCCGCCCTGCA CGGCAAGGATGCGGCCCTGCTGTTCACCTCCGGCTATGTCTCGAACCAGGCGACTCTGACCGCGATCCTCAACTCGATGC CCGGCTGGCACGTGTTTTCCGACGCGCAGAACCACAATTCGATGATCGTCGGCATCAAGGGCGGCAAGGCGGCGACGGTG CATGTCTTCGCCCATAACGACCTCGCCGATCTCGAAGCCCGTCTTGCGGCGGCGCCGGCGGATGCGCCGAAGATGATCGC CTTCGAGAGCGTCTATTCGATGGACGGCGACATCGCCCCGATCGGCGCGATCTGCGACCTCGCCGACAAGTATAACGCCA TCACCTATCTCGACGAGGTTCACGCCGTCGGCATGTATGGGCCGCACGGTGCCGGCGTCTCCGAGCGCGACGGCGTTGCC CATCGGCTCACCATCATCGAGGGCACGCTGGCCAAGGCCTATGGCTGCCACGGCGGCTACATCGCCGGCGATGCCAGCGT GATCGACTATATCCGCTCGGTTGCGGCCGGCTTCATCTTCACCACCGCCCTGCCCCCGCCCACCGTCGCGGCGGCGCTTG CCTCGATCCGCCGGCTGAAGGTCGACCAGGCGCGGCGCGATACGCTGTTCGAACGGGCAAATCTGCTGAAATCGAAATTC GACCAGGCCAGACTGCCGCGCCTGCCGACAGAGAGCCACATCGTCCCGCTGATGATCGGCAACGCGACACGGGCAACCGA AGTCTCGATGCGGCTGATCCGCGAATTCGGCATGTACGCAACTCCGATCAACTACCCGACGGTACCGGCTGGCACCGAAC GGCTACGTTTCACACCGGGCCCCAAACATACGGAAGCGATGATGGACCAGCTCGTCGCCGCCTTGCGTCATATTCTTTCC GGCGAAACCGGAACGGTGGCGGCCTGA
Upstream 100 bases:
>100_bases TTGAACTTATGTCCTTGACGAGCGATGCCGCTTTCCCCGCAATAGTCAACGTTCGGGCACGGCCACGTCGCCGGCTCCGA GAGACTACGAGGAGCATCGT
Downstream 100 bases:
>100_bases CCCGGTCTTGCAGCCAGCGACGAGCCTCGCTATAGCCTCGCGCAGCGCCGACATAGCTCAGCGGTAGAGCAACTGATTCG TAATCAGTAGGTCCCCAGTT
Product: 5-aminolevulinate synthase
Products: NA
Alternate protein names: 5-aminolevulinic acid synthase; Delta-ALA synthase; Delta-aminolevulinate synthase [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MNRDHPFIAQCDKALADIRAAGRYRRFVALEKLADRFPYYKVTMEGRTQDILVWSSNDYLAMGTDPEVIEASIEAARTMG AGAGGTRNIAGSSPIHVALEAELAALHGKDAALLFTSGYVSNQATLTAILNSMPGWHVFSDAQNHNSMIVGIKGGKAATV HVFAHNDLADLEARLAAAPADAPKMIAFESVYSMDGDIAPIGAICDLADKYNAITYLDEVHAVGMYGPHGAGVSERDGVA HRLTIIEGTLAKAYGCHGGYIAGDASVIDYIRSVAAGFIFTTALPPPTVAAALASIRRLKVDQARRDTLFERANLLKSKF DQARLPRLPTESHIVPLMIGNATRATEVSMRLIREFGMYATPINYPTVPAGTERLRFTPGPKHTEAMMDQLVAALRHILS GETGTVAA
Sequences:
>Translated_408_residues MNRDHPFIAQCDKALADIRAAGRYRRFVALEKLADRFPYYKVTMEGRTQDILVWSSNDYLAMGTDPEVIEASIEAARTMG AGAGGTRNIAGSSPIHVALEAELAALHGKDAALLFTSGYVSNQATLTAILNSMPGWHVFSDAQNHNSMIVGIKGGKAATV HVFAHNDLADLEARLAAAPADAPKMIAFESVYSMDGDIAPIGAICDLADKYNAITYLDEVHAVGMYGPHGAGVSERDGVA HRLTIIEGTLAKAYGCHGGYIAGDASVIDYIRSVAAGFIFTTALPPPTVAAALASIRRLKVDQARRDTLFERANLLKSKF DQARLPRLPTESHIVPLMIGNATRATEVSMRLIREFGMYATPINYPTVPAGTERLRFTPGPKHTEAMMDQLVAALRHILS GETGTVAA >Mature_408_residues MNRDHPFIAQCDKALADIRAAGRYRRFVALEKLADRFPYYKVTMEGRTQDILVWSSNDYLAMGTDPEVIEASIEAARTMG AGAGGTRNIAGSSPIHVALEAELAALHGKDAALLFTSGYVSNQATLTAILNSMPGWHVFSDAQNHNSMIVGIKGGKAATV HVFAHNDLADLEARLAAAPADAPKMIAFESVYSMDGDIAPIGAICDLADKYNAITYLDEVHAVGMYGPHGAGVSERDGVA HRLTIIEGTLAKAYGCHGGYIAGDASVIDYIRSVAAGFIFTTALPPPTVAAALASIRRLKVDQARRDTLFERANLLKSKF DQARLPRLPTESHIVPLMIGNATRATEVSMRLIREFGMYATPINYPTVPAGTERLRFTPGPKHTEAMMDQLVAALRHILS GETGTVAA
Specific function: Unknown
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI83977442, Length=376, Percent_Identity=46.5425531914894, Blast_Score=352, Evalue=3e-97, Organism=Homo sapiens, GI83977440, Length=376, Percent_Identity=46.5425531914894, Blast_Score=352, Evalue=3e-97, Organism=Homo sapiens, GI83977444, Length=376, Percent_Identity=46.5425531914894, Blast_Score=352, Evalue=4e-97, Organism=Homo sapiens, GI4502025, Length=389, Percent_Identity=44.987146529563, Blast_Score=324, Evalue=1e-88, Organism=Homo sapiens, GI40316939, Length=389, Percent_Identity=44.987146529563, Blast_Score=324, Evalue=1e-88, Organism=Homo sapiens, GI7657118, Length=385, Percent_Identity=33.5064935064935, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI284448556, Length=352, Percent_Identity=34.9431818181818, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI119220554, Length=393, Percent_Identity=26.7175572519084, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI4758668, Length=373, Percent_Identity=28.1501340482574, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI5454084, Length=260, Percent_Identity=27.3076923076923, Blast_Score=108, Evalue=6e-24, Organism=Escherichia coli, GI1790046, Length=351, Percent_Identity=33.6182336182336, Blast_Score=194, Evalue=7e-51, Organism=Escherichia coli, GI1786993, Length=346, Percent_Identity=33.5260115606936, Blast_Score=169, Evalue=4e-43, Organism=Caenorhabditis elegans, GI71994529, Length=386, Percent_Identity=31.8652849740933, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI32566772, Length=403, Percent_Identity=30.272952853598, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17560914, Length=348, Percent_Identity=26.7241379310345, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17560912, Length=348, Percent_Identity=26.7241379310345, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71982617, Length=283, Percent_Identity=24.0282685512367, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71982625, Length=283, Percent_Identity=24.0282685512367, Blast_Score=88, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6320438, Length=411, Percent_Identity=45.2554744525547, Blast_Score=338, Evalue=9e-94, Organism=Saccharomyces cerevisiae, GI6320267, Length=396, Percent_Identity=26.7676767676768, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6323954, Length=288, Percent_Identity=24.6527777777778, Blast_Score=101, Evalue=3e-22, Organism=Drosophila melanogaster, GI17137420, Length=379, Percent_Identity=46.7018469656992, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI24662918, Length=386, Percent_Identity=35.4922279792746, Blast_Score=224, Evalue=9e-59, Organism=Drosophila melanogaster, GI17136286, Length=399, Percent_Identity=28.0701754385965, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI24653280, Length=286, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24653276, Length=286, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24653278, Length=286, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010961 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.37 [H]
Molecular weight: Translated: 43777; Mature: 43777
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRDHPFIAQCDKALADIRAAGRYRRFVALEKLADRFPYYKVTMEGRTQDILVWSSNDYL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCEE AMGTDPEVIEASIEAARTMGAGAGGTRNIAGSSPIHVALEAELAALHGKDAALLFTSGYV EECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCEEEEEECCCC SNQATLTAILNSMPGWHVFSDAQNHNSMIVGIKGGKAATVHVFAHNDLADLEARLAAAPA CCCHHHHHHHHCCCCCEEECCCCCCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHCCCC DAPKMIAFESVYSMDGDIAPIGAICDLADKYNAITYLDEVHAVGMYGPHGAGVSERDGVA CCCHHEEHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCE HRLTIIEGTLAKAYGCHGGYIAGDASVIDYIRSVAAGFIFTTALPPPTVAAALASIRRLK EEEEEEECHHHHHHCCCCCEECCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH VDQARRDTLFERANLLKSKFDQARLPRLPTESHIVPLMIGNATRATEVSMRLIREFGMYA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEE TPINYPTVPAGTERLRFTPGPKHTEAMMDQLVAALRHILSGETGTVAA CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNRDHPFIAQCDKALADIRAAGRYRRFVALEKLADRFPYYKVTMEGRTQDILVWSSNDYL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCCCEE AMGTDPEVIEASIEAARTMGAGAGGTRNIAGSSPIHVALEAELAALHGKDAALLFTSGYV EECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCEEEEEECCCC SNQATLTAILNSMPGWHVFSDAQNHNSMIVGIKGGKAATVHVFAHNDLADLEARLAAAPA CCCHHHHHHHHCCCCCEEECCCCCCCCEEEEEECCCEEEEEEEECCCHHHHHHHHHCCCC DAPKMIAFESVYSMDGDIAPIGAICDLADKYNAITYLDEVHAVGMYGPHGAGVSERDGVA CCCHHEEHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCE HRLTIIEGTLAKAYGCHGGYIAGDASVIDYIRSVAAGFIFTTALPPPTVAAALASIRRLK EEEEEEECHHHHHHCCCCCEECCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH VDQARRDTLFERANLLKSKFDQARLPRLPTESHIVPLMIGNATRATEVSMRLIREFGMYA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEE TPINYPTVPAGTERLRFTPGPKHTEAMMDQLVAALRHILSGETGTVAA CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2034217 [H]