| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is sixA [C]
Identifier: 148243374
GI number: 148243374
Start: 1978002
End: 1978505
Strand: Direct
Name: sixA [C]
Synonym: SynRCC307_2275
Alternate gene names: 148243374
Gene position: 1978002-1978505 (Clockwise)
Preceding gene: 148243373
Following gene: 148243375
Centisome position: 88.9
GC content: 64.29
Gene sequence:
>504_bases ATGGCTCGAGAACTGCTGCTGATCCGCCACGGCATTGCTGTCGAGCGCGGCAGCACCGCCACCGATGAGGAACGCGCCCT TACCACCGAAGGGCGTGCGCGCACGCGGCAAGTGTTGAAGCGGCTGCTGCGCCTGGAGTTGCACTCGGACAGCCTGCTCA GTAGCCCGTTCATCCGCGCCCGGCAAACCGCTGAATTAGCCCTGCAACTGGGGCTGGGAGACACCCTCAACGTGCGCGAT GAGCTGGCGCCAGGCCAAGACCCCCTGCCCTTGCTGCAAGAACTGCTGGCGGAGGAGTGGAAACGGGTGGCGGTTTTTGG CCATGAGCCCGATCTCAGTCAGCTGGCGTGCCATCTGCTGGGTTGCAGCACCAACAGCCTGCAGCTCAAAAAAGCTGGGG TTGCCCTCGTCGAGCTGGAGCCAGGGCTGCCGCAGCTCGAGCCCGGCAACGGCCAGCTGAAGCTGCTACTCAGCCCCAAA GTGCTGCTGGAGGGCAAAAAGTGA
Upstream 100 bases:
>100_bases CGCCTGGGGCCTTCGCTCCAAGGGGCGGCCTTGGCGCTATCACAGGATCAGAGCAGCGCGGAGCTCGATGTGCTGCTGAC GTTCCACTGACGATGGGCCC
Downstream 100 bases:
>100_bases CTGAAGCTCGCCGCGTAGCCTCGATCTGGTGTGCAATACCGGCAAAGCGATGAGCGAGGCTCCCACCGGTTTTCGCCCTG GATTGGAGGGGGTTCCTGCC
Product: putative phosphohistidine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MARELLLIRHGIAVERGSTATDEERALTTEGRARTRQVLKRLLRLELHSDSLLSSPFIRARQTAELALQLGLGDTLNVRD ELAPGQDPLPLLQELLAEEWKRVAVFGHEPDLSQLACHLLGCSTNSLQLKKAGVALVELEPGLPQLEPGNGQLKLLLSPK VLLEGKK
Sequences:
>Translated_167_residues MARELLLIRHGIAVERGSTATDEERALTTEGRARTRQVLKRLLRLELHSDSLLSSPFIRARQTAELALQLGLGDTLNVRD ELAPGQDPLPLLQELLAEEWKRVAVFGHEPDLSQLACHLLGCSTNSLQLKKAGVALVELEPGLPQLEPGNGQLKLLLSPK VLLEGKK >Mature_166_residues ARELLLIRHGIAVERGSTATDEERALTTEGRARTRQVLKRLLRLELHSDSLLSSPFIRARQTAELALQLGLGDTLNVRDE LAPGQDPLPLLQELLAEEWKRVAVFGHEPDLSQLACHLLGCSTNSLQLKKAGVALVELEPGLPQLEPGNGQLKLLLSPKV LLEGKK
Specific function: Exhibits Phosphohistidine Phosphatase Activity Towards The Hpt Domain Of The Arcb Sensor Involved In The Multistep His- Asp Phosphorelay. [C]
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR004449 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: 3.1.3.- [C]
Molecular weight: Translated: 18329; Mature: 18197
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARELLLIRHGIAVERGSTATDEERALTTEGRARTRQVLKRLLRLELHSDSLLSSPFIRA CCCCEEEECCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHH RQTAELALQLGLGDTLNVRDELAPGQDPLPLLQELLAEEWKRVAVFGHEPDLSQLACHLL HHHHHHHEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHH GCSTNSLQLKKAGVALVELEPGLPQLEPGNGQLKLLLSPKVLLEGKK CCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEECCC >Mature Secondary Structure ARELLLIRHGIAVERGSTATDEERALTTEGRARTRQVLKRLLRLELHSDSLLSSPFIRA CCCEEEECCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHH RQTAELALQLGLGDTLNVRDELAPGQDPLPLLQELLAEEWKRVAVFGHEPDLSQLACHLL HHHHHHHEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHH GCSTNSLQLKKAGVALVELEPGLPQLEPGNGQLKLLLSPKVLLEGKK CCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]