Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243373

Identifier: 148243373

GI number: 148243373

Start: 1976435

End: 1977991

Strand: Direct

Name: 148243373

Synonym: SynRCC307_2274

Alternate gene names: NA

Gene position: 1976435-1977991 (Clockwise)

Preceding gene: 148243370

Following gene: 148243374

Centisome position: 88.83

GC content: 65.83

Gene sequence:

>1557_bases
GTGCAGAAGCTTCTGCAGCAATCGACGGCAGCTGTGGTGGCGATCGCCATCAGCTTGGTGGGACTCGGTGCCGCTGGCTG
GTGGTGGCTACAAAGTCAAAGCCCGCTGAAGCTGCAACACCAGAGCCTCACAACACCTGCCACCACACGCTTTCTGCCCA
CCGACGCCAACCTGACGTTGATCCTGGAAGCCGACCCAGGGCGTCTGCCCGATTACGGGCGAGCGGTGGCCCCCATGCGT
CAGCGCCGTCAGGCGGCCGATCAGTTGGAGCATCTGCGTGATGCCCTGTTCGCGGCTGCAGGGCTGGACTACGCCACCGA
ATTGGCCGACTGGCTGGGTGATGAAAGTGCTCTGGCTGTGACAAGCGGAGACACCCCTGGCTGGGTGCTGGCCCTCTCCA
GCCGCGACGACGATGGCGGCCGGCAATTCCTGCAGCGCTTCTGGCAATCGCGAAGCCTGGCGGGCGGGGGCCTCGACATC
ACCCGCTACCGCGGCCTGGGAGTGATCAGCAGCCGCGGCCAACAAAGCCAGGGCCGGCCCTCTACCAGCAGCCCACAAGC
GGAACACCCGCCCCTGGCTTCGGCCCTAATCAACGATCAACTGGTGCTGCTGGCCTCCAGCCGCGGCCAACTCGAGGATG
CCCTCGATGCATCCCAGGAAGAGGCCAGGAACCTGGCGGGAGATCCGCTGCTGGCGCAATGGCTGGATGCAGGCCGCCAG
GGCATTGCCCTGCTGCGGGGTGATCGCCAGGGCATCGAACAGCTGCTGAGGTTGCCAGCGAGCTGGAGCACCGATCAACC
GATCGAGCAATTTGTCGGCAGCTTGCAACTTGATGGGGCTGGGGTTCGCCTGGCTGCTCAGCTGCAAACCAGCTCTGGGG
CGTCGATCGCCCCACTGAGTCGCCGGGATCAGCAAGTGCTCGGCAACCTCAACCAGCCGGTCCAGCGGCTGAGCCTCAGC
CGCCCCAGCGGCCCCCTGGCCCCGCTGTTCAACCTGACAGCCGCGAGCGACGACATCCTGCTGCCGGCTCTGCTGGAGGG
CGAGCAGCCTCTACTGGAGGCGCAATTGCAGGACAGCAAAGCCTGGTTGATCGGCAGCAGCCAGAGCGCTCCACCAGCCG
CAAGCCTCAATGAAGCGCTGGCCGAGCAAGGCTTTGACGCCAACAACCTCGATGGTTTGCAGGTGTGGAGCCATCTGACG
GGCCAAAGCGATCGCCAGGGCCAACTGCAGGCCACCGTGGCCGGCGCCACCGGAGTGGCGCAGTCCAATCGCTGGTGGAG
CAATAGCCTCGATGGCTTGCGCGCCCAGTTGCAGGGCCATGGCTCAGGCGGAGTGCCAAGCGAACTCTTGGAGCGGCTCA
ATCCCTCCACTGGGGCCATTGCCCTATTGGGCGCCGATGGCCGCAGCACCGCCGAGTTGCTCAAACCCTGGCCCCTGTGG
CGCGGTCTGCAGCTGCTCGCTGGCCAACGCCTGGGGCCTTCGCTCCAAGGGGCGGCCTTGGCGCTATCACAGGATCAGAG
CAGCGCGGAGCTCGATGTGCTGCTGACGTTCCACTGA

Upstream 100 bases:

>100_bases
GCGGCTGCGTGGAAGACATCCAGCGCTGCAACTCGGGCGCAGAGATCGACGTTGGTGCGTTTGCCATGGATGATTTGTAA
ATCACGGCAGGGAGTGCTGG

Downstream 100 bases:

>100_bases
CGATGGGCCCATGGCTCGAGAACTGCTGCTGATCCGCCACGGCATTGCTGTCGAGCGCGGCAGCACCGCCACCGATGAGG
AACGCGCCCTTACCACCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MQKLLQQSTAAVVAIAISLVGLGAAGWWWLQSQSPLKLQHQSLTTPATTRFLPTDANLTLILEADPGRLPDYGRAVAPMR
QRRQAADQLEHLRDALFAAAGLDYATELADWLGDESALAVTSGDTPGWVLALSSRDDDGGRQFLQRFWQSRSLAGGGLDI
TRYRGLGVISSRGQQSQGRPSTSSPQAEHPPLASALINDQLVLLASSRGQLEDALDASQEEARNLAGDPLLAQWLDAGRQ
GIALLRGDRQGIEQLLRLPASWSTDQPIEQFVGSLQLDGAGVRLAAQLQTSSGASIAPLSRRDQQVLGNLNQPVQRLSLS
RPSGPLAPLFNLTAASDDILLPALLEGEQPLLEAQLQDSKAWLIGSSQSAPPAASLNEALAEQGFDANNLDGLQVWSHLT
GQSDRQGQLQATVAGATGVAQSNRWWSNSLDGLRAQLQGHGSGGVPSELLERLNPSTGAIALLGADGRSTAELLKPWPLW
RGLQLLAGQRLGPSLQGAALALSQDQSSAELDVLLTFH

Sequences:

>Translated_518_residues
MQKLLQQSTAAVVAIAISLVGLGAAGWWWLQSQSPLKLQHQSLTTPATTRFLPTDANLTLILEADPGRLPDYGRAVAPMR
QRRQAADQLEHLRDALFAAAGLDYATELADWLGDESALAVTSGDTPGWVLALSSRDDDGGRQFLQRFWQSRSLAGGGLDI
TRYRGLGVISSRGQQSQGRPSTSSPQAEHPPLASALINDQLVLLASSRGQLEDALDASQEEARNLAGDPLLAQWLDAGRQ
GIALLRGDRQGIEQLLRLPASWSTDQPIEQFVGSLQLDGAGVRLAAQLQTSSGASIAPLSRRDQQVLGNLNQPVQRLSLS
RPSGPLAPLFNLTAASDDILLPALLEGEQPLLEAQLQDSKAWLIGSSQSAPPAASLNEALAEQGFDANNLDGLQVWSHLT
GQSDRQGQLQATVAGATGVAQSNRWWSNSLDGLRAQLQGHGSGGVPSELLERLNPSTGAIALLGADGRSTAELLKPWPLW
RGLQLLAGQRLGPSLQGAALALSQDQSSAELDVLLTFH
>Mature_518_residues
MQKLLQQSTAAVVAIAISLVGLGAAGWWWLQSQSPLKLQHQSLTTPATTRFLPTDANLTLILEADPGRLPDYGRAVAPMR
QRRQAADQLEHLRDALFAAAGLDYATELADWLGDESALAVTSGDTPGWVLALSSRDDDGGRQFLQRFWQSRSLAGGGLDI
TRYRGLGVISSRGQQSQGRPSTSSPQAEHPPLASALINDQLVLLASSRGQLEDALDASQEEARNLAGDPLLAQWLDAGRQ
GIALLRGDRQGIEQLLRLPASWSTDQPIEQFVGSLQLDGAGVRLAAQLQTSSGASIAPLSRRDQQVLGNLNQPVQRLSLS
RPSGPLAPLFNLTAASDDILLPALLEGEQPLLEAQLQDSKAWLIGSSQSAPPAASLNEALAEQGFDANNLDGLQVWSHLT
GQSDRQGQLQATVAGATGVAQSNRWWSNSLDGLRAQLQGHGSGGVPSELLERLNPSTGAIALLGADGRSTAELLKPWPLW
RGLQLLAGQRLGPSLQGAALALSQDQSSAELDVLLTFH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55052; Mature: 55052

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLLQQSTAAVVAIAISLVGLGAAGWWWLQSQSPLKLQHQSLTTPATTRFLPTDANLTL
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEHHHCCCCCCCEEEEECCCCEEE
ILEADPGRLPDYGRAVAPMRQRRQAADQLEHLRDALFAAAGLDYATELADWLGDESALAV
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEE
TSGDTPGWVLALSSRDDDGGRQFLQRFWQSRSLAGGGLDITRYRGLGVISSRGQQSQGRP
ECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEHCCCCCEECCCCCCCCCCC
STSSPQAEHPPLASALINDQLVLLASSRGQLEDALDASQEEARNLAGDPLLAQWLDAGRQ
CCCCCCCCCCCHHHHHHCCCEEEEECCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHCCCC
GIALLRGDRQGIEQLLRLPASWSTDQPIEQFVGSLQLDGAGVRLAAQLQTSSGASIAPLS
CEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHCCEEECCCCEEEEEEEECCCCCCCCCCC
RRDQQVLGNLNQPVQRLSLSRPSGPLAPLFNLTAASDDILLPALLEGEQPLLEAQLQDSK
HHHHHHHCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEHHHHCCCCHHHHHHHCCCC
AWLIGSSQSAPPAASLNEALAEQGFDANNLDGLQVWSHLTGQSDRQGQLQATVAGATGVA
EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCC
QSNRWWSNSLDGLRAQLQGHGSGGVPSELLERLNPSTGAIALLGADGRSTAELLKPWPLW
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCHH
RGLQLLAGQRLGPSLQGAALALSQDQSSAELDVLLTFH
HHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure
MQKLLQQSTAAVVAIAISLVGLGAAGWWWLQSQSPLKLQHQSLTTPATTRFLPTDANLTL
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEHHHCCCCCCCEEEEECCCCEEE
ILEADPGRLPDYGRAVAPMRQRRQAADQLEHLRDALFAAAGLDYATELADWLGDESALAV
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEE
TSGDTPGWVLALSSRDDDGGRQFLQRFWQSRSLAGGGLDITRYRGLGVISSRGQQSQGRP
ECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEHCCCCCEECCCCCCCCCCC
STSSPQAEHPPLASALINDQLVLLASSRGQLEDALDASQEEARNLAGDPLLAQWLDAGRQ
CCCCCCCCCCCHHHHHHCCCEEEEECCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHCCCC
GIALLRGDRQGIEQLLRLPASWSTDQPIEQFVGSLQLDGAGVRLAAQLQTSSGASIAPLS
CEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHCCEEECCCCEEEEEEEECCCCCCCCCCC
RRDQQVLGNLNQPVQRLSLSRPSGPLAPLFNLTAASDDILLPALLEGEQPLLEAQLQDSK
HHHHHHHCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEHHHHCCCCHHHHHHHCCCC
AWLIGSSQSAPPAASLNEALAEQGFDANNLDGLQVWSHLTGQSDRQGQLQATVAGATGVA
EEEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCC
QSNRWWSNSLDGLRAQLQGHGSGGVPSELLERLNPSTGAIALLGADGRSTAELLKPWPLW
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCHH
RGLQLLAGQRLGPSLQGAALALSQDQSSAELDVLLTFH
HHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA