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The map label for this gene is yvdB [H]

Identifier: 148243262

GI number: 148243262

Start: 1868271

End: 1869935

Strand: Direct

Name: yvdB [H]

Synonym: SynRCC307_2163

Alternate gene names: 148243262

Gene position: 1868271-1869935 (Clockwise)

Preceding gene: 148243261

Following gene: 148243264

Centisome position: 83.97

GC content: 62.82

Gene sequence:

>1665_bases
ATGCCTGCGGCCACGGCGGTGTTCAACCGAATCAGCGCCAACAATCTGCGCGGTGACCTGTTTGGCGGCCTGACCGCCGC
CGTGATCGCCCTGCCGATGGCCCTGGCTTTCGGTGTAGCCAGCGGAGCTGGCGCCACGGCAGGCCTCTGGGGTGCGGTGC
TGGTGGGTCTCTTCGCCGCTCTCTTTGGCGGCACTCCCACGTTGATCTCCGAGCCCACGGGCCCGATGACGGTGGTGATG
ACAGCAGTCATCGCTGGCCTGACAGCCCGCAACCCCGAGCACGGCCTGGCCATGGCATTCACGGTGGTGATGCTGGCTGG
GGTGTTCCAGATCGGCTTTGGCCTGTTGCGTCTGGGGCGGTACGTCACCCAGATGCCTTACACGGTGATCTCCGGCTTCA
TGAGCGGGATCGGCCTGATCCTGATCATCCTGCAGCTGGGACCCTTCCTGGGTCAGGCCAGCCCCAAGGGAGGCGTGATT
GGCACCTTGCAGGCGTTGCCTCAACTGCTAGCCGGAGCACGCCCTTTGGAGGTGTCCCTGGCGCTGATCACCCTGGCCAT
CCTCTGGTTCACCCCCAAGCAACTCAAAAAAATTGCCCCACCGCAGTTGATTGCGCTGCTGGTGGGAACCCTGGTCTCGC
TGCCACTGATCAGTGGCTTTGGCTCTGAGGACATTCGCCGCATTGGCGAAATTGCCTCCGGCTTCCCGCAGCTGCAGCTG
CCGATGTTCAGCGGCGCTGAACTGCAACTGATGGTGGTGGATGCCGCTGTGCTCGGCATGCTCGGCTGCATTGATGCTCT
GCTCACCTCGGTGGTGGCCGACAGCCTCACCCGGACAGAGCACAACTCCAACAAAGAACTGATTGGCCAAGGCCTGGGCA
ACCTCGTCAGTGGCCTGTTCGGTGGCCTGCCCGGCGCTGGCGCCACGATGGGCACGGTGGTGAACATCCAGAGCGGCGGC
CGCAGCGCCCTCTCCGGCATCTTCCGCGCGGTGATCCTGATGCTGGTGATCCTGGTGGGAGCTCCACTGGCAGCCGAGAT
TCCTCAAGCGGTGCTGGCTGGCATTGCCCTGAAGGTGGGTGTCGACATCGTCGACTGGGATTTCATCAAGCGCGCCCACC
GCATCTCCCTCAATGGGGCGCTGATCATGTATTTAGTGATCGCCCTCACCGTTCTGGTGGATCTGATCACCGCGGTGTTT
GTAGGCGTTTTCATCGCCAACATCCTCACGATCGACAAGATGAGCGAGCTGCAAAGCGAGGCGATCCAGTCGGTGAGCAC
AGGCGATGGCGACCTGGAGATCAGCGACGACGAGCGCGAGCTACTGAATCAGGGCCACGGCAAGGTTCTGCTGTTCCAGC
TCAATGGCGCCATGATTTTCGGCGTTGCCAAGGCGATTAACCGCGAGCACAACGCCATCAGCGACTGCAGGGCCGTGGTG
TTTGACCTCTCCAAGGTGTCGCACCTGGGTGTGACCGCAGCGCTAGCCGTGGAAAACGCGGTGGAAGAAGCGATTGAAGT
GGGCCGGCAGGTGTTTGTCGTTGGTGCCAGCGGCACCACACGCCGGCGCTTGGAAAAGCTCGGCCTATTCAGCAAGCTGC
CAGCAGAGCGCACTGAAATCGACCGGCGCGAGGCGCTGCGGACCGCCGTAGCGGGGATTGCCTGA

Upstream 100 bases:

>100_bases
TACCACGCCGGTGAGGTGCAGCGGCTGATGCAGGAACACCCACGCTGATCAATTTCTTTTGGTCAACCGCTTAGGGTTTA
GGCCCAGTCCGACGTACTAA

Downstream 100 bases:

>100_bases
GTCGATCAGGCAGCCACCGCCTCCTTCTCAGCCAGGCCAACGTTGCCGCGCTCGCTGGGGGGAACCAGCAGCTTGAAGCG
GCCCTTCCAGCTGTTCCAAT

Product: MFS superfamily sulfate permease

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MPAATAVFNRISANNLRGDLFGGLTAAVIALPMALAFGVASGAGATAGLWGAVLVGLFAALFGGTPTLISEPTGPMTVVM
TAVIAGLTARNPEHGLAMAFTVVMLAGVFQIGFGLLRLGRYVTQMPYTVISGFMSGIGLILIILQLGPFLGQASPKGGVI
GTLQALPQLLAGARPLEVSLALITLAILWFTPKQLKKIAPPQLIALLVGTLVSLPLISGFGSEDIRRIGEIASGFPQLQL
PMFSGAELQLMVVDAAVLGMLGCIDALLTSVVADSLTRTEHNSNKELIGQGLGNLVSGLFGGLPGAGATMGTVVNIQSGG
RSALSGIFRAVILMLVILVGAPLAAEIPQAVLAGIALKVGVDIVDWDFIKRAHRISLNGALIMYLVIALTVLVDLITAVF
VGVFIANILTIDKMSELQSEAIQSVSTGDGDLEISDDERELLNQGHGKVLLFQLNGAMIFGVAKAINREHNAISDCRAVV
FDLSKVSHLGVTAALAVENAVEEAIEVGRQVFVVGASGTTRRRLEKLGLFSKLPAERTEIDRREALRTAVAGIA

Sequences:

>Translated_554_residues
MPAATAVFNRISANNLRGDLFGGLTAAVIALPMALAFGVASGAGATAGLWGAVLVGLFAALFGGTPTLISEPTGPMTVVM
TAVIAGLTARNPEHGLAMAFTVVMLAGVFQIGFGLLRLGRYVTQMPYTVISGFMSGIGLILIILQLGPFLGQASPKGGVI
GTLQALPQLLAGARPLEVSLALITLAILWFTPKQLKKIAPPQLIALLVGTLVSLPLISGFGSEDIRRIGEIASGFPQLQL
PMFSGAELQLMVVDAAVLGMLGCIDALLTSVVADSLTRTEHNSNKELIGQGLGNLVSGLFGGLPGAGATMGTVVNIQSGG
RSALSGIFRAVILMLVILVGAPLAAEIPQAVLAGIALKVGVDIVDWDFIKRAHRISLNGALIMYLVIALTVLVDLITAVF
VGVFIANILTIDKMSELQSEAIQSVSTGDGDLEISDDERELLNQGHGKVLLFQLNGAMIFGVAKAINREHNAISDCRAVV
FDLSKVSHLGVTAALAVENAVEEAIEVGRQVFVVGASGTTRRRLEKLGLFSKLPAERTEIDRREALRTAVAGIA
>Mature_553_residues
PAATAVFNRISANNLRGDLFGGLTAAVIALPMALAFGVASGAGATAGLWGAVLVGLFAALFGGTPTLISEPTGPMTVVMT
AVIAGLTARNPEHGLAMAFTVVMLAGVFQIGFGLLRLGRYVTQMPYTVISGFMSGIGLILIILQLGPFLGQASPKGGVIG
TLQALPQLLAGARPLEVSLALITLAILWFTPKQLKKIAPPQLIALLVGTLVSLPLISGFGSEDIRRIGEIASGFPQLQLP
MFSGAELQLMVVDAAVLGMLGCIDALLTSVVADSLTRTEHNSNKELIGQGLGNLVSGLFGGLPGAGATMGTVVNIQSGGR
SALSGIFRAVILMLVILVGAPLAAEIPQAVLAGIALKVGVDIVDWDFIKRAHRISLNGALIMYLVIALTVLVDLITAVFV
GVFIANILTIDKMSELQSEAIQSVSTGDGDLEISDDERELLNQGHGKVLLFQLNGAMIFGVAKAINREHNAISDCRAVVF
DLSKVSHLGVTAALAVENAVEEAIEVGRQVFVVGASGTTRRRLEKLGLFSKLPAERTEIDRREALRTAVAGIA

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI4557535, Length=374, Percent_Identity=23.2620320855615, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI94721253, Length=423, Percent_Identity=25.531914893617, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI94721259, Length=423, Percent_Identity=25.531914893617, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI94721255, Length=423, Percent_Identity=25.531914893617, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI45827800, Length=484, Percent_Identity=23.1404958677686, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI39752683, Length=485, Percent_Identity=23.0927835051546, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI94721257, Length=423, Percent_Identity=25.531914893617, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI65506789, Length=133, Percent_Identity=31.5789473684211, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI45827802, Length=426, Percent_Identity=23.4741784037559, Blast_Score=67, Evalue=6e-11,
Organism=Escherichia coli, GI87081859, Length=443, Percent_Identity=30.2483069977427, Blast_Score=154, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI86565215, Length=455, Percent_Identity=24.1758241758242, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17566848, Length=558, Percent_Identity=22.0430107526882, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI86564196, Length=509, Percent_Identity=20.6286836935167, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17551690, Length=379, Percent_Identity=21.8997361477573, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193203292, Length=443, Percent_Identity=22.5733634311512, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI86564876, Length=404, Percent_Identity=23.5148514851485, Blast_Score=69, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6325260, Length=581, Percent_Identity=21.342512908778, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6319771, Length=401, Percent_Identity=22.6932668329177, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24647160, Length=405, Percent_Identity=22.4691358024691, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355087, Length=405, Percent_Identity=22.4691358024691, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24663084, Length=540, Percent_Identity=21.6666666666667, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21357695, Length=540, Percent_Identity=21.6666666666667, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI85815873, Length=454, Percent_Identity=23.3480176211454, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI19922482, Length=393, Percent_Identity=22.9007633587786, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24666186, Length=290, Percent_Identity=23.7931034482759, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 57571; Mature: 57440

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCC
>Mature Secondary Structure 
PAATAVFNRISANNLRGDLFGGLTAAVIALPMALAFGVASGAGATAGLWGAVLVGLFAA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH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HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]