Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243264

Identifier: 148243264

GI number: 148243264

Start: 1874647

End: 1876338

Strand: Direct

Name: 148243264

Synonym: SynRCC307_2165

Alternate gene names: NA

Gene position: 1874647-1876338 (Clockwise)

Preceding gene: 148243262

Following gene: 148243265

Centisome position: 84.26

GC content: 62.41

Gene sequence:

>1692_bases
GTGCTGCCAGTCAGTCCGCCCCCACCACCCAGCCCACCTGCCCTGCTGCAACTGGTTGAAAACCCAGTCAGCGAGGGCGA
TCGACTCTTAATCAATGGCCAGCCACTGCCGGTGCGCTGGCGCTTTGAACCCGGCACTCCAGGCCGGTTGTGGCTGCCGC
TCGACCTACTCGAAGCCGAGCTCGGCGTGGAAGCCAAGCGGATTGCCGGCGGCACCCTCGAACTGAGCTGGTTTGGTCAA
GAGCAAACCGTCAGCCCTGACGAGCAGATCAGCCTCGACGACGAGGTGGCCATTGAGGTGACTGCCCTGTTGCGCGGTGG
CGGCATACGCCTGCAGCTAGAGCCAGGCAGCGACGGCAACGAACAGCTGGCTCTGCAATTGCCGGCTCCGCGTTTTCTGC
AGCTGCGGGAATCCATCCGTGATGGCAGCCAGCGTCTGGTCCTCGATCTCAGTGGGCCAACCCTGCTGCCTCGAAGCGAT
GGGCAACTCCAACTGCCGCTGAGCAACCCCAGTGCGGCTGCCCGCGCTCTACGGGAGCGCGGCCTGGAGGCTGGCATTGA
TGGCAGGCGGGTGCTGTTGCCGATTGAAGGCTGGAGCCAATTCAGCCTTGGAAATCCCGCCAGGCTGGTGCTCGATGAGC
GCAGCAACGGGCTGGCGCCCATGGCCAAACGGCCGCAACCATTCCTGCCGGCTGGTAGTGGCGGCTTGCAGATGGAGCAG
CGGCGTATGGGAATCCGCCGCCAAAATTATTTAGTGAGCTTTGTGCGGTTTGATCCCACCGCCGAAACCTTCAACTTGGT
GCCCCTGAGTCGTCAAAACATGGTCGGGCTGGGGTCACTGCTGGGCCTCGCCCGCTCCCAAGGCGCCGTGGCAGCGATCA
ACGGCGGATTTTTTAACCGCATCCAGGCCCTGCCCCTTGGCGGCTTGCGCGATGACGGCGACTGGCTCTCGGGCCCCATT
CTTGATCGCGGCGCCATCGCTTGGGCACCGCAGGAACTACCCCGCTTCAGCCGGGTTCGGCTCAACGAAACCTTGATAAG
CGATGCCGGCAAGCGCATTCAGCTCAACGCCATCAATAGCGGCTGGGTCAGCAAGGGCGTGGCCCAATACAACAGTCTTT
GGGGGCCCCGCTACAAAGCGATTACGGGTAGAGAAGAGGCGGTGTTGGTGCAGGGCCAACAAGTGGCGCGCCGCTTTAGC
CACGCAGAACTCAGCCGCGGGGTTGGTTTGCGGCGCGGCGAAACCCTTGTTGTGGCTAGGGGAGGAGCACCCTTGCCGCT
CAAGGCAGGCGATGGCGTCAGCCTGGAGAGGTCGATGGTGCCCAAAGCCTTTGCTGAGCTGCCCAACCTGATCCAAGGCG
GGCCCTTGCTGCTCAACCAAGGGAAGGTGGTGCTCAATGGCAAAGCCGAACGATTCAGTTCTGCTTTTATGCGCCAAAAA
GCACCGCGCAGCGTGGTGGGCAGTGATGACGAGCTGATTTGGCTGCTCGCCGTGGAAGGCCAGGGCAATGCCGGCCCCAC
CCTGCGTGAAACCGCTGAACTGATGCAAAAGCTTGGCCTCAAGCAAGCGCTCAACCTCGATGGCGGCAGCTCAACACGCC
TGATGGTCAGAAATAGAGGGCAATCCAGTGGACGCGGCTTTGGCGCTGCCATTCACAATGGTTTGGGCATCGTGCTCAGC
CCCAATCGCTAA

Upstream 100 bases:

>100_bases
TTGCTGGCTCAGGCCCAACGGCACGAAAAAGCACACCGAAGAAAGATCCTAAAAGTTCGAGCCCTGGCTAAGTTGCTTCG
ACCATGCCGGGTCGTTTGAG

Downstream 100 bases:

>100_bases
GTCCCATGGAGCCCAAGGCCGGCTTTTTGATCACTCCCCGCGCTGCAGCTGAGCTCTGCCGCCTTTCGCTGCGGGCTGGC
CAGCCTGGTTTGGCCTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MLPVSPPPPPSPPALLQLVENPVSEGDRLLINGQPLPVRWRFEPGTPGRLWLPLDLLEAELGVEAKRIAGGTLELSWFGQ
EQTVSPDEQISLDDEVAIEVTALLRGGGIRLQLEPGSDGNEQLALQLPAPRFLQLRESIRDGSQRLVLDLSGPTLLPRSD
GQLQLPLSNPSAAARALRERGLEAGIDGRRVLLPIEGWSQFSLGNPARLVLDERSNGLAPMAKRPQPFLPAGSGGLQMEQ
RRMGIRRQNYLVSFVRFDPTAETFNLVPLSRQNMVGLGSLLGLARSQGAVAAINGGFFNRIQALPLGGLRDDGDWLSGPI
LDRGAIAWAPQELPRFSRVRLNETLISDAGKRIQLNAINSGWVSKGVAQYNSLWGPRYKAITGREEAVLVQGQQVARRFS
HAELSRGVGLRRGETLVVARGGAPLPLKAGDGVSLERSMVPKAFAELPNLIQGGPLLLNQGKVVLNGKAERFSSAFMRQK
APRSVVGSDDELIWLLAVEGQGNAGPTLRETAELMQKLGLKQALNLDGGSSTRLMVRNRGQSSGRGFGAAIHNGLGIVLS
PNR

Sequences:

>Translated_563_residues
MLPVSPPPPPSPPALLQLVENPVSEGDRLLINGQPLPVRWRFEPGTPGRLWLPLDLLEAELGVEAKRIAGGTLELSWFGQ
EQTVSPDEQISLDDEVAIEVTALLRGGGIRLQLEPGSDGNEQLALQLPAPRFLQLRESIRDGSQRLVLDLSGPTLLPRSD
GQLQLPLSNPSAAARALRERGLEAGIDGRRVLLPIEGWSQFSLGNPARLVLDERSNGLAPMAKRPQPFLPAGSGGLQMEQ
RRMGIRRQNYLVSFVRFDPTAETFNLVPLSRQNMVGLGSLLGLARSQGAVAAINGGFFNRIQALPLGGLRDDGDWLSGPI
LDRGAIAWAPQELPRFSRVRLNETLISDAGKRIQLNAINSGWVSKGVAQYNSLWGPRYKAITGREEAVLVQGQQVARRFS
HAELSRGVGLRRGETLVVARGGAPLPLKAGDGVSLERSMVPKAFAELPNLIQGGPLLLNQGKVVLNGKAERFSSAFMRQK
APRSVVGSDDELIWLLAVEGQGNAGPTLRETAELMQKLGLKQALNLDGGSSTRLMVRNRGQSSGRGFGAAIHNGLGIVLS
PNR
>Mature_563_residues
MLPVSPPPPPSPPALLQLVENPVSEGDRLLINGQPLPVRWRFEPGTPGRLWLPLDLLEAELGVEAKRIAGGTLELSWFGQ
EQTVSPDEQISLDDEVAIEVTALLRGGGIRLQLEPGSDGNEQLALQLPAPRFLQLRESIRDGSQRLVLDLSGPTLLPRSD
GQLQLPLSNPSAAARALRERGLEAGIDGRRVLLPIEGWSQFSLGNPARLVLDERSNGLAPMAKRPQPFLPAGSGGLQMEQ
RRMGIRRQNYLVSFVRFDPTAETFNLVPLSRQNMVGLGSLLGLARSQGAVAAINGGFFNRIQALPLGGLRDDGDWLSGPI
LDRGAIAWAPQELPRFSRVRLNETLISDAGKRIQLNAINSGWVSKGVAQYNSLWGPRYKAITGREEAVLVQGQQVARRFS
HAELSRGVGLRRGETLVVARGGAPLPLKAGDGVSLERSMVPKAFAELPNLIQGGPLLLNQGKVVLNGKAERFSSAFMRQK
APRSVVGSDDELIWLLAVEGQGNAGPTLRETAELMQKLGLKQALNLDGGSSTRLMVRNRGQSSGRGFGAAIHNGLGIVLS
PNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60687; Mature: 60687

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVSPPPPPSPPALLQLVENPVSEGDRLLINGQPLPVRWRFEPGTPGRLWLPLDLLEAE
CCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCEEEEEHHHHHHH
LGVEAKRIAGGTLELSWFGQEQTVSPDEQISLDDEVAIEVTALLRGGGIRLQLEPGSDGN
HCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCC
EQLALQLPAPRFLQLRESIRDGSQRLVLDLSGPTLLPRSDGQLQLPLSNPSAAARALRER
CEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCCEEEECCCHHHHHHHHHHC
GLEAGIDGRRVLLPIEGWSQFSLGNPARLVLDERSNGLAPMAKRPQPFLPAGSGGLQMEQ
CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHH
RRMGIRRQNYLVSFVRFDPTAETFNLVPLSRQNMVGLGSLLGLARSQGAVAAINGGFFNR
HHHCCCHHCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHH
IQALPLGGLRDDGDWLSGPILDRGAIAWAPQELPRFSRVRLNETLISDAGKRIQLNAINS
EEECCCCCCCCCCCCCCCCCCCCCCEEECHHHCCCHHHHHHHHHHHHCCCCEEEEEECCC
GWVSKGVAQYNSLWGPRYKAITGREEAVLVQGQQVARRFSHAELSRGVGLRRGETLVVAR
CHHHHHHHHHHHCCCCCEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
GGAPLPLKAGDGVSLERSMVPKAFAELPNLIQGGPLLLNQGKVVLNGKAERFSSAFMRQK
CCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCHHHHHHHHHHHC
APRSVVGSDDELIWLLAVEGQGNAGPTLRETAELMQKLGLKQALNLDGGSSTRLMVRNRG
CCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHEECCCCCCCEEEEEECCC
QSSGRGFGAAIHNGLGIVLSPNR
CCCCCCCHHHHHCCEEEEECCCC
>Mature Secondary Structure
MLPVSPPPPPSPPALLQLVENPVSEGDRLLINGQPLPVRWRFEPGTPGRLWLPLDLLEAE
CCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCEEEEEHHHHHHH
LGVEAKRIAGGTLELSWFGQEQTVSPDEQISLDDEVAIEVTALLRGGGIRLQLEPGSDGN
HCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCC
EQLALQLPAPRFLQLRESIRDGSQRLVLDLSGPTLLPRSDGQLQLPLSNPSAAARALRER
CEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCEECCCCCCCEEEECCCHHHHHHHHHHC
GLEAGIDGRRVLLPIEGWSQFSLGNPARLVLDERSNGLAPMAKRPQPFLPAGSGGLQMEQ
CCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHH
RRMGIRRQNYLVSFVRFDPTAETFNLVPLSRQNMVGLGSLLGLARSQGAVAAINGGFFNR
HHHCCCHHCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCHHHH
IQALPLGGLRDDGDWLSGPILDRGAIAWAPQELPRFSRVRLNETLISDAGKRIQLNAINS
EEECCCCCCCCCCCCCCCCCCCCCCEEECHHHCCCHHHHHHHHHHHHCCCCEEEEEECCC
GWVSKGVAQYNSLWGPRYKAITGREEAVLVQGQQVARRFSHAELSRGVGLRRGETLVVAR
CHHHHHHHHHHHCCCCCEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
GGAPLPLKAGDGVSLERSMVPKAFAELPNLIQGGPLLLNQGKVVLNGKAERFSSAFMRQK
CCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCEEEECCCHHHHHHHHHHHC
APRSVVGSDDELIWLLAVEGQGNAGPTLRETAELMQKLGLKQALNLDGGSSTRLMVRNRG
CCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHEECCCCCCCEEEEEECCC
QSSGRGFGAAIHNGLGIVLSPNR
CCCCCCCHHHHHCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA